From 20a9d42e607c9b458196a309543758b0c0360705 Mon Sep 17 00:00:00 2001
From: GitHub <noreply@github.com>
Date: Sat, 2 Dec 2023 20:35:54 +0000
Subject: [PATCH 1/3] MAINT: update pip constraints and pre-commit

---
 .pre-commit-config.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index 43061442..9c39bdd9 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -39,7 +39,7 @@ repos:
           )$
 
   - repo: https://github.com/ComPWA/repo-maintenance
-    rev: 0.1.5
+    rev: 0.1.6
     hooks:
       - id: check-dev-files
         args:

From 367fb0a86ad98b7d2feac774577c87d6255de353 Mon Sep 17 00:00:00 2001
From: "pre-commit-ci[bot]"
 <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Date: Sat, 2 Dec 2023 20:36:26 +0000
Subject: [PATCH 2/3] [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci
---
 .pre-commit-config.yaml | 21 ++--------------
 pyproject.toml          | 56 +++++++++++++++++++++++------------------
 2 files changed, 33 insertions(+), 44 deletions(-)

diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index 9c39bdd9..5401d0a7 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -52,16 +52,6 @@ repos:
       - id: pin-nb-requirements
       - id: set-nb-cells
 
-  - repo: https://github.com/nbQA-dev/nbQA
-    rev: 1.7.1
-    hooks:
-      - id: nbqa-pyupgrade
-        args:
-          - --py37-plus
-      - id: nbqa-ruff
-        args:
-          - --fix
-
   - repo: https://github.com/psf/black-pre-commit-mirror
     rev: 23.11.0
     hooks:
@@ -149,19 +139,12 @@ repos:
     hooks:
       - id: pyright
 
-  - repo: https://github.com/asottile/pyupgrade
-    rev: v3.15.0
-    hooks:
-      - id: pyupgrade
-        args:
-          - --py37-plus
-
   - repo: https://github.com/astral-sh/ruff-pre-commit
     rev: v0.1.6
     hooks:
       - id: ruff
-        args:
-          - --fix
+        args: [--fix]
+        types_or: [python, pyi, jupyter]
 
   - repo: https://github.com/ComPWA/mirrors-taplo
     rev: v0.8.1
diff --git a/pyproject.toml b/pyproject.toml
index 4e1eebb5..91f7c082 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -67,10 +67,13 @@ format = [
 ]
 jupyter = [
     "compwa-org[doc]",
+    "isort",
     "jupyterlab",
     "jupyterlab-code-formatter",
+    "jupyterlab-git",
     "jupyterlab-lsp",
     "jupyterlab-myst",
+    "python-lsp-ruff",
     "python-lsp-server[rope]",
     'ypy-websocket <0.8.3; python_version <"3.8.0"',
 ]
@@ -130,31 +133,6 @@ target-version = [
     "py39",
 ]
 
-[tool.nbqa.addopts]
-ruff = [
-    "--extend-ignore=A003",
-    "--extend-ignore=B008",
-    "--extend-ignore=B018",
-    "--extend-ignore=C408",
-    "--extend-ignore=C90",
-    "--extend-ignore=D",
-    "--extend-ignore=F404",
-    "--extend-ignore=F821", # cell magic
-    "--extend-ignore=ISC003",
-    "--extend-ignore=N802",
-    "--extend-ignore=N803",
-    "--extend-ignore=N806",
-    "--extend-ignore=N807",
-    "--extend-ignore=N815",
-    "--extend-ignore=N816",
-    "--extend-ignore=PLR09",
-    "--extend-ignore=PLR2004",
-    "--extend-ignore=PLW0602",
-    "--extend-ignore=PLW0603",
-    "--extend-ignore=PLW2901",
-    "--line-length=85",
-]
-
 [tool.pyright]
 exclude = [
     "**/.git",
@@ -210,6 +188,7 @@ norecursedirs = ["_build"]
 testpaths = ["docs"]
 
 [tool.ruff]
+extend-include = ["*.ipynb"]
 extend-select = [
     "A",
     "B",
@@ -260,6 +239,33 @@ target-version = "py37"
 task-tags = ["cspell"]
 
 [tool.ruff.per-file-ignores]
+"*.ipynb" = [
+    "A003",
+    "B008",
+    "B018",
+    "C408",
+    "C90",
+    "D",
+    "E402",
+    "E703",
+    "F404",
+    "F821",
+    "ISC003",
+    "N802",
+    "N803",
+    "N806",
+    "N807",
+    "N815",
+    "N816",
+    "PLR09",
+    "PLR2004",
+    "PLW0602",
+    "PLW0603",
+    "PLW2901",
+    "S101",
+    "T201",
+    "TCH00",
+]
 "docs/*" = [
     "D",
     "E402",

From 2d580479633cad2c502de56b4a0aca95ccfe6c05 Mon Sep 17 00:00:00 2001
From: GitHub <noreply@github.com>
Date: Sat, 2 Dec 2023 20:40:06 +0000
Subject: [PATCH 3/3] MAINT: update pip constraints and pre-commit

---
 .constraints/py3.10.txt | 10 ++++++++++
 .constraints/py3.11.txt | 10 ++++++++++
 .constraints/py3.12.txt | 10 ++++++++++
 .constraints/py3.7.txt  | 10 ++++++++++
 .constraints/py3.8.txt  | 10 ++++++++++
 .constraints/py3.9.txt  | 10 ++++++++++
 6 files changed, 60 insertions(+)

diff --git a/.constraints/py3.10.txt b/.constraints/py3.10.txt
index 11789b62..e3def6f5 100644
--- a/.constraints/py3.10.txt
+++ b/.constraints/py3.10.txt
@@ -18,6 +18,7 @@ beautifulsoup4==4.12.2
 black==23.11.0
 bleach==6.1.0
 cachetools==5.3.2
+cattrs==23.2.3
 certifi==2023.11.17
 cffi==1.16.0
 cfgv==3.4.0
@@ -40,6 +41,8 @@ fastjsonschema==2.19.0
 filelock==3.13.1
 fonttools==4.46.0
 fqdn==1.5.1
+gitdb==4.0.11
+gitpython==3.1.40
 graphviz==0.20.1
 greenlet==3.0.1
 identify==2.5.32
@@ -53,6 +56,7 @@ ipython==8.18.1
 ipython-genutils==0.2.0
 ipywidgets==8.1.1
 isoduration==20.11.0
+isort==5.12.0
 jedi==0.19.1
 jinja2==3.1.2
 json5==0.9.14
@@ -67,9 +71,11 @@ jupyter-core==5.5.0
 jupyter-events==0.9.0
 jupyter-lsp==2.2.1
 jupyter-server==2.11.1
+jupyter-server-mathjax==0.2.6
 jupyter-server-terminals==0.4.4
 jupyterlab==4.0.9
 jupyterlab-code-formatter==2.2.1
+jupyterlab-git==0.50.0
 jupyterlab-lsp==5.0.1
 jupyterlab-myst==2.1.0
 jupyterlab-pygments==0.3.0
@@ -78,6 +84,7 @@ jupyterlab-widgets==3.0.9
 kiwisolver==1.4.5
 latexcodec==2.0.1
 livereload==2.6.3
+lsprotocol==2023.0.0
 markdown-it-py==2.2.0
 markupsafe==2.1.3
 matplotlib==3.8.2
@@ -91,6 +98,7 @@ myst-nb==1.0.0
 myst-parser==1.0.0
 nbclient==0.6.8
 nbconvert==7.11.0
+nbdime==4.0.1
 nbformat==5.9.2
 nbmake==1.4.6
 nest-asyncio==1.5.8
@@ -124,6 +132,7 @@ pytest==7.4.3
 python-dateutil==2.8.2
 python-json-logger==2.0.7
 python-lsp-jsonrpc==1.1.2
+python-lsp-ruff==2.0.0
 python-lsp-server==1.9.0
 pytoolconfig==1.2.6
 pyyaml==6.0.1
@@ -139,6 +148,7 @@ rpds-py==0.13.2
 ruff==0.1.6
 send2trash==1.8.2
 six==1.16.0
+smmap==5.0.1
 sniffio==1.3.0
 snowballstemmer==2.2.0
 soupsieve==2.5
diff --git a/.constraints/py3.11.txt b/.constraints/py3.11.txt
index bc1e50f1..20d019cf 100644
--- a/.constraints/py3.11.txt
+++ b/.constraints/py3.11.txt
@@ -18,6 +18,7 @@ beautifulsoup4==4.12.2
 black==23.11.0
 bleach==6.1.0
 cachetools==5.3.2
+cattrs==23.2.3
 certifi==2023.11.17
 cffi==1.16.0
 cfgv==3.4.0
@@ -39,6 +40,8 @@ fastjsonschema==2.19.0
 filelock==3.13.1
 fonttools==4.46.0
 fqdn==1.5.1
+gitdb==4.0.11
+gitpython==3.1.40
 graphviz==0.20.1
 greenlet==3.0.1
 identify==2.5.32
@@ -52,6 +55,7 @@ ipython==8.18.1
 ipython-genutils==0.2.0
 ipywidgets==8.1.1
 isoduration==20.11.0
+isort==5.12.0
 jedi==0.19.1
 jinja2==3.1.2
 json5==0.9.14
@@ -66,9 +70,11 @@ jupyter-core==5.5.0
 jupyter-events==0.9.0
 jupyter-lsp==2.2.1
 jupyter-server==2.11.1
+jupyter-server-mathjax==0.2.6
 jupyter-server-terminals==0.4.4
 jupyterlab==4.0.9
 jupyterlab-code-formatter==2.2.1
+jupyterlab-git==0.50.0
 jupyterlab-lsp==5.0.1
 jupyterlab-myst==2.1.0
 jupyterlab-pygments==0.3.0
@@ -77,6 +83,7 @@ jupyterlab-widgets==3.0.9
 kiwisolver==1.4.5
 latexcodec==2.0.1
 livereload==2.6.3
+lsprotocol==2023.0.0
 markdown-it-py==2.2.0
 markupsafe==2.1.3
 matplotlib==3.8.2
@@ -90,6 +97,7 @@ myst-nb==1.0.0
 myst-parser==1.0.0
 nbclient==0.6.8
 nbconvert==7.11.0
+nbdime==4.0.1
 nbformat==5.9.2
 nbmake==1.4.6
 nest-asyncio==1.5.8
@@ -123,6 +131,7 @@ pytest==7.4.3
 python-dateutil==2.8.2
 python-json-logger==2.0.7
 python-lsp-jsonrpc==1.1.2
+python-lsp-ruff==2.0.0
 python-lsp-server==1.9.0
 pytoolconfig==1.2.6
 pyyaml==6.0.1
@@ -138,6 +147,7 @@ rpds-py==0.13.2
 ruff==0.1.6
 send2trash==1.8.2
 six==1.16.0
+smmap==5.0.1
 sniffio==1.3.0
 snowballstemmer==2.2.0
 soupsieve==2.5
diff --git a/.constraints/py3.12.txt b/.constraints/py3.12.txt
index 07829e7a..c2be91ee 100644
--- a/.constraints/py3.12.txt
+++ b/.constraints/py3.12.txt
@@ -18,6 +18,7 @@ beautifulsoup4==4.12.2
 black==23.11.0
 bleach==6.1.0
 cachetools==5.3.2
+cattrs==23.2.3
 certifi==2023.11.17
 cffi==1.16.0
 cfgv==3.4.0
@@ -39,6 +40,8 @@ fastjsonschema==2.19.0
 filelock==3.13.1
 fonttools==4.46.0
 fqdn==1.5.1
+gitdb==4.0.11
+gitpython==3.1.40
 graphviz==0.20.1
 greenlet==3.0.1
 identify==2.5.32
@@ -52,6 +55,7 @@ ipython==8.18.1
 ipython-genutils==0.2.0
 ipywidgets==8.1.1
 isoduration==20.11.0
+isort==5.12.0
 jedi==0.19.1
 jinja2==3.1.2
 json5==0.9.14
@@ -66,9 +70,11 @@ jupyter-core==5.5.0
 jupyter-events==0.9.0
 jupyter-lsp==2.2.1
 jupyter-server==2.11.1
+jupyter-server-mathjax==0.2.6
 jupyter-server-terminals==0.4.4
 jupyterlab==4.0.9
 jupyterlab-code-formatter==2.2.1
+jupyterlab-git==0.50.0
 jupyterlab-lsp==5.0.1
 jupyterlab-myst==2.1.0
 jupyterlab-pygments==0.3.0
@@ -77,6 +83,7 @@ jupyterlab-widgets==3.0.9
 kiwisolver==1.4.5
 latexcodec==2.0.1
 livereload==2.6.3
+lsprotocol==2023.0.0
 markdown-it-py==2.2.0
 markupsafe==2.1.3
 matplotlib==3.8.2
@@ -90,6 +97,7 @@ myst-nb==1.0.0
 myst-parser==1.0.0
 nbclient==0.6.8
 nbconvert==7.11.0
+nbdime==4.0.1
 nbformat==5.9.2
 nbmake==1.4.6
 nest-asyncio==1.5.8
@@ -123,6 +131,7 @@ pytest==7.4.3
 python-dateutil==2.8.2
 python-json-logger==2.0.7
 python-lsp-jsonrpc==1.1.2
+python-lsp-ruff==2.0.0
 python-lsp-server==1.9.0
 pytoolconfig==1.2.6
 pyyaml==6.0.1
@@ -138,6 +147,7 @@ rpds-py==0.13.2
 ruff==0.1.6
 send2trash==1.8.2
 six==1.16.0
+smmap==5.0.1
 sniffio==1.3.0
 snowballstemmer==2.2.0
 soupsieve==2.5
diff --git a/.constraints/py3.7.txt b/.constraints/py3.7.txt
index 34a19d45..a7ebed85 100644
--- a/.constraints/py3.7.txt
+++ b/.constraints/py3.7.txt
@@ -20,6 +20,7 @@ black==23.3.0
 bleach==6.0.0
 cached-property==1.5.2
 cachetools==5.3.2
+cattrs==23.1.2
 certifi==2023.11.17
 cffi==1.15.1
 cfgv==3.3.1
@@ -41,6 +42,8 @@ fastjsonschema==2.19.0
 filelock==3.12.2
 fonttools==4.38.0
 fqdn==1.5.1
+gitdb==4.0.11
+gitpython==3.1.40
 graphviz==0.20.1
 greenlet==3.0.1
 identify==2.5.24
@@ -55,6 +58,7 @@ ipython==7.34.0
 ipython-genutils==0.2.0
 ipywidgets==8.1.1
 isoduration==20.11.0
+isort==5.11.5
 jedi==0.18.2
 jinja2==3.1.2
 json5==0.9.14
@@ -69,10 +73,12 @@ jupyter-events==0.6.3
 jupyter-lsp==1.5.1
 jupyter-server==1.24.0
 jupyter-server-fileid==0.9.0
+jupyter-server-mathjax==0.2.6
 jupyter-server-ydoc==0.8.0
 jupyter-ydoc==0.2.4
 jupyterlab==3.6.6
 jupyterlab-code-formatter==2.2.1
+jupyterlab-git==0.44.0
 jupyterlab-lsp==3.10.2
 jupyterlab-myst==1.2.0
 jupyterlab-pygments==0.2.2
@@ -81,6 +87,7 @@ jupyterlab-widgets==3.0.9
 kiwisolver==1.4.5
 latexcodec==2.0.1
 livereload==2.6.3
+lsprotocol==2023.0.0
 markdown-it-py==2.2.0
 markupsafe==2.1.3
 matplotlib==3.5.3
@@ -95,6 +102,7 @@ myst-parser==0.18.1
 nbclassic==1.0.0
 nbclient==0.5.13
 nbconvert==7.6.0
+nbdime==3.2.1
 nbformat==5.8.0
 nbmake==1.2.1
 nest-asyncio==1.5.8
@@ -130,6 +138,7 @@ pytest==7.4.3
 python-dateutil==2.8.2
 python-json-logger==2.0.7
 python-lsp-jsonrpc==1.0.0
+python-lsp-ruff==1.6.0
 python-lsp-server==1.7.4
 pytoolconfig==1.2.6
 pytz==2023.3.post1
@@ -144,6 +153,7 @@ rope==1.9.0
 ruff==0.1.6
 send2trash==1.8.2
 six==1.16.0
+smmap==5.0.1
 sniffio==1.3.0
 snowballstemmer==2.2.0
 soupsieve==2.4.1
diff --git a/.constraints/py3.8.txt b/.constraints/py3.8.txt
index 4f6975dd..5ffe238a 100644
--- a/.constraints/py3.8.txt
+++ b/.constraints/py3.8.txt
@@ -19,6 +19,7 @@ beautifulsoup4==4.12.2
 black==23.11.0
 bleach==6.1.0
 cachetools==5.3.2
+cattrs==23.2.3
 certifi==2023.11.17
 cffi==1.16.0
 cfgv==3.4.0
@@ -41,6 +42,8 @@ fastjsonschema==2.19.0
 filelock==3.13.1
 fonttools==4.46.0
 fqdn==1.5.1
+gitdb==4.0.11
+gitpython==3.1.40
 graphviz==0.20.1
 greenlet==3.0.1
 identify==2.5.32
@@ -55,6 +58,7 @@ ipython==8.12.3
 ipython-genutils==0.2.0
 ipywidgets==8.1.1
 isoduration==20.11.0
+isort==5.12.0
 jedi==0.19.1
 jinja2==3.1.2
 json5==0.9.14
@@ -69,9 +73,11 @@ jupyter-core==5.5.0
 jupyter-events==0.9.0
 jupyter-lsp==2.2.1
 jupyter-server==2.11.1
+jupyter-server-mathjax==0.2.6
 jupyter-server-terminals==0.4.4
 jupyterlab==4.0.9
 jupyterlab-code-formatter==2.2.1
+jupyterlab-git==0.50.0
 jupyterlab-lsp==5.0.1
 jupyterlab-myst==2.1.0
 jupyterlab-pygments==0.3.0
@@ -80,6 +86,7 @@ jupyterlab-widgets==3.0.9
 kiwisolver==1.4.5
 latexcodec==2.0.1
 livereload==2.6.3
+lsprotocol==2023.0.0
 markdown-it-py==2.2.0
 markupsafe==2.1.3
 matplotlib==3.7.4
@@ -93,6 +100,7 @@ myst-nb==0.17.2
 myst-parser==0.18.1
 nbclient==0.6.8
 nbconvert==7.11.0
+nbdime==4.0.1
 nbformat==5.9.2
 nbmake==1.4.6
 nest-asyncio==1.5.8
@@ -128,6 +136,7 @@ pytest==7.4.3
 python-dateutil==2.8.2
 python-json-logger==2.0.7
 python-lsp-jsonrpc==1.1.2
+python-lsp-ruff==2.0.0
 python-lsp-server==1.9.0
 pytoolconfig==1.2.6
 pytz==2023.3.post1
@@ -144,6 +153,7 @@ rpds-py==0.13.2
 ruff==0.1.6
 send2trash==1.8.2
 six==1.16.0
+smmap==5.0.1
 sniffio==1.3.0
 snowballstemmer==2.2.0
 soupsieve==2.5
diff --git a/.constraints/py3.9.txt b/.constraints/py3.9.txt
index 92ef3d9d..2d39b5f4 100644
--- a/.constraints/py3.9.txt
+++ b/.constraints/py3.9.txt
@@ -18,6 +18,7 @@ beautifulsoup4==4.12.2
 black==23.11.0
 bleach==6.1.0
 cachetools==5.3.2
+cattrs==23.2.3
 certifi==2023.11.17
 cffi==1.16.0
 cfgv==3.4.0
@@ -40,6 +41,8 @@ fastjsonschema==2.19.0
 filelock==3.13.1
 fonttools==4.46.0
 fqdn==1.5.1
+gitdb==4.0.11
+gitpython==3.1.40
 graphviz==0.20.1
 greenlet==3.0.1
 identify==2.5.32
@@ -54,6 +57,7 @@ ipython==8.18.1
 ipython-genutils==0.2.0
 ipywidgets==8.1.1
 isoduration==20.11.0
+isort==5.12.0
 jedi==0.19.1
 jinja2==3.1.2
 json5==0.9.14
@@ -68,9 +72,11 @@ jupyter-core==5.5.0
 jupyter-events==0.9.0
 jupyter-lsp==2.2.1
 jupyter-server==2.11.1
+jupyter-server-mathjax==0.2.6
 jupyter-server-terminals==0.4.4
 jupyterlab==4.0.9
 jupyterlab-code-formatter==2.2.1
+jupyterlab-git==0.50.0
 jupyterlab-lsp==5.0.1
 jupyterlab-myst==2.1.0
 jupyterlab-pygments==0.3.0
@@ -79,6 +85,7 @@ jupyterlab-widgets==3.0.9
 kiwisolver==1.4.5
 latexcodec==2.0.1
 livereload==2.6.3
+lsprotocol==2023.0.0
 markdown-it-py==2.2.0
 markupsafe==2.1.3
 matplotlib==3.8.2
@@ -92,6 +99,7 @@ myst-nb==1.0.0
 myst-parser==1.0.0
 nbclient==0.6.8
 nbconvert==7.11.0
+nbdime==4.0.1
 nbformat==5.9.2
 nbmake==1.4.6
 nest-asyncio==1.5.8
@@ -125,6 +133,7 @@ pytest==7.4.3
 python-dateutil==2.8.2
 python-json-logger==2.0.7
 python-lsp-jsonrpc==1.1.2
+python-lsp-ruff==2.0.0
 python-lsp-server==1.9.0
 pytoolconfig==1.2.6
 pyyaml==6.0.1
@@ -140,6 +149,7 @@ rpds-py==0.13.2
 ruff==0.1.6
 send2trash==1.8.2
 six==1.16.0
+smmap==5.0.1
 sniffio==1.3.0
 snowballstemmer==2.2.0
 soupsieve==2.5