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FrederickGri opened this issue Jun 24, 2024 · 2 comments
Open

some website is not working #6

FrederickGri opened this issue Jun 24, 2024 · 2 comments

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@FrederickGri
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hello, the website in 08_LDSC for reference resource is not working how to solve this issue?

2024-06-24 16:00:50-- https://storage.googleapis.com/broad-alkesgroup-public/LDSCORE/w_hm3.snplist.bz2
Resolving storage.googleapis.com (storage.googleapis.com)... 142.251.42.251, 172.217.160.123, 172.217.163.59, ...
Connecting to storage.googleapis.com (storage.googleapis.com)|142.251.42.251|:443... connected.
HTTP request sent, awaiting response... 404 Not Found
2024-06-24 16:00:51 ERROR 404: Not Found.

@Cloufield
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Hi,
Thanks for the feedback. The original link was changed and I will fix it soon.
You can manually download the datasets from https://doi.org/10.5281/zenodo.7768714.

Description of LDSC's new dataset url:

Due to excessive data transfer costs, this directory is now available on a requester-pays basis at 
https://console.cloud.google.com/storage/browser/broad-alkesgroup-public-requester-pays. 
The downloader will pay transfer costs of $0.01-$0.15 per GB (depending on region) to google cloud.

A minimal set of files necessary to run LDSC are available for free acecss at https://doi.org/10.5281/zenodo.7768714.

baselineLF_v2.2.UKB.tar.gz is available for free access at https://broad-alkesgroup-ukbb-ld.s3.amazonaws.com/UKBB_LD/baselineLF_v2.2.UKB.tar.gz as
part of the AWS Open Data Project.

@Cloufield
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More description of new data location here: https://alkesgroup.broadinstitute.org/LDSCORE/

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