From d5b70a3462ba0d0f36cafb86e5a3ae43fb1775c7 Mon Sep 17 00:00:00 2001 From: Sebastian Diaz Date: Mon, 11 Dec 2023 15:00:42 +0100 Subject: [PATCH] Added method get_managed_variants to mip rna workflow --- cg/meta/workflow/mip_rna.py | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/cg/meta/workflow/mip_rna.py b/cg/meta/workflow/mip_rna.py index 22abbf6e76..90f938cb7e 100644 --- a/cg/meta/workflow/mip_rna.py +++ b/cg/meta/workflow/mip_rna.py @@ -56,3 +56,7 @@ def config_sample(self, link_obj, panel_bed: str | None = None) -> dict[str, str def get_gene_panel(self, case_id: str) -> list[str]: """Create and return the aggregated gene panel file.""" return self._get_gene_panel(case_id=case_id, genome_build=GENOME_BUILD_38) + + def get_managed_variants(self) -> list[str]: + """Create and return the managed variants.""" + return self._get_managed_variants(genome_build=GENOME_BUILD_38)