diff --git a/.github/workflows/tests_and_coverage.yml b/.github/workflows/tests_and_coverage.yml
index 46d2f28506..a601201570 100644
--- a/.github/workflows/tests_and_coverage.yml
+++ b/.github/workflows/tests_and_coverage.yml
@@ -24,16 +24,8 @@ jobs:
         with:
           virtualenvs-create: false
 
-      - name: Cache dependencies
-        uses: actions/cache@v4
-        id: cache
-        with:
-          path: ${{ env.pythonLocation }}
-          key: ${{ env.pythonLocation }}-${{ hashFiles('**/poetry.lock') }}
-
       - name: Install Dependencies
-        if: steps.cache.outputs.cache-hit != 'true'
-        run: poetry install --no-interaction
+        run: poetry install --no-interaction --all-extras
 
       - name: Test with Pytest & Coveralls
         run: |
diff --git a/poetry.lock b/poetry.lock
index e78dd410d5..fdb762dc28 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -1,14 +1,16 @@
-# This file is automatically @generated by Poetry 1.7.1 and should not be changed by hand.
+# This file is automatically @generated by Poetry 2.0.0 and should not be changed by hand.
 
 [[package]]
 name = "alembic"
-version = "1.12.0"
+version = "1.14.0"
 description = "A database migration tool for SQLAlchemy."
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
-    {file = "alembic-1.12.0-py3-none-any.whl", hash = "sha256:03226222f1cf943deee6c85d9464261a6c710cd19b4fe867a3ad1f25afda610f"},
-    {file = "alembic-1.12.0.tar.gz", hash = "sha256:8e7645c32e4f200675e69f0745415335eb59a3663f5feb487abfa0b30c45888b"},
+    {file = "alembic-1.14.0-py3-none-any.whl", hash = "sha256:99bd884ca390466db5e27ffccff1d179ec5c05c965cfefc0607e69f9e411cb25"},
+    {file = "alembic-1.14.0.tar.gz", hash = "sha256:b00892b53b3642d0b8dbedba234dbf1924b69be83a9a769d5a624b01094e304b"},
 ]
 
 [package.dependencies]
@@ -17,47 +19,55 @@ SQLAlchemy = ">=1.3.0"
 typing-extensions = ">=4"
 
 [package.extras]
-tz = ["python-dateutil"]
+tz = ["backports.zoneinfo"]
 
 [[package]]
 name = "annotated-types"
-version = "0.6.0"
+version = "0.7.0"
 description = "Reusable constraint types to use with typing.Annotated"
 optional = false
 python-versions = ">=3.8"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
-    {file = "annotated_types-0.6.0-py3-none-any.whl", hash = "sha256:0641064de18ba7a25dee8f96403ebc39113d0cb953a01429249d5c7564666a43"},
-    {file = "annotated_types-0.6.0.tar.gz", hash = "sha256:563339e807e53ffd9c267e99fc6d9ea23eb8443c08f112651963e24e22f84a5d"},
+    {file = "annotated_types-0.7.0-py3-none-any.whl", hash = "sha256:1f02e8b43a8fbbc3f3e0d4f0f4bfc8131bcb4eebe8849b8e5c773f3a1c582a53"},
+    {file = "annotated_types-0.7.0.tar.gz", hash = "sha256:aff07c09a53a08bc8cfccb9c85b05f1aa9a2a6f23728d790723543408344ce89"},
 ]
 
 [[package]]
 name = "bcrypt"
-version = "4.0.1"
+version = "4.2.1"
 description = "Modern password hashing for your software and your servers"
 optional = false
-python-versions = ">=3.6"
-files = [
-    {file = "bcrypt-4.0.1-cp36-abi3-macosx_10_10_universal2.whl", hash = "sha256:b1023030aec778185a6c16cf70f359cbb6e0c289fd564a7cfa29e727a1c38f8f"},
-    {file = "bcrypt-4.0.1-cp36-abi3-manylinux_2_17_aarch64.manylinux2014_aarch64.manylinux_2_24_aarch64.whl", hash = "sha256:08d2947c490093a11416df18043c27abe3921558d2c03e2076ccb28a116cb6d0"},
-    {file = "bcrypt-4.0.1-cp36-abi3-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:0eaa47d4661c326bfc9d08d16debbc4edf78778e6aaba29c1bc7ce67214d4410"},
-    {file = "bcrypt-4.0.1-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:ae88eca3024bb34bb3430f964beab71226e761f51b912de5133470b649d82344"},
-    {file = "bcrypt-4.0.1-cp36-abi3-manylinux_2_24_x86_64.whl", hash = "sha256:a522427293d77e1c29e303fc282e2d71864579527a04ddcfda6d4f8396c6c36a"},
-    {file = "bcrypt-4.0.1-cp36-abi3-manylinux_2_28_aarch64.whl", hash = "sha256:fbdaec13c5105f0c4e5c52614d04f0bca5f5af007910daa8b6b12095edaa67b3"},
-    {file = "bcrypt-4.0.1-cp36-abi3-manylinux_2_28_x86_64.whl", hash = "sha256:ca3204d00d3cb2dfed07f2d74a25f12fc12f73e606fcaa6975d1f7ae69cacbb2"},
-    {file = "bcrypt-4.0.1-cp36-abi3-musllinux_1_1_aarch64.whl", hash = "sha256:089098effa1bc35dc055366740a067a2fc76987e8ec75349eb9484061c54f535"},
-    {file = "bcrypt-4.0.1-cp36-abi3-musllinux_1_1_x86_64.whl", hash = "sha256:e9a51bbfe7e9802b5f3508687758b564069ba937748ad7b9e890086290d2f79e"},
-    {file = "bcrypt-4.0.1-cp36-abi3-win32.whl", hash = "sha256:2caffdae059e06ac23fce178d31b4a702f2a3264c20bfb5ff541b338194d8fab"},
-    {file = "bcrypt-4.0.1-cp36-abi3-win_amd64.whl", hash = "sha256:8a68f4341daf7522fe8d73874de8906f3a339048ba406be6ddc1b3ccb16fc0d9"},
-    {file = "bcrypt-4.0.1-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:bf4fa8b2ca74381bb5442c089350f09a3f17797829d958fad058d6e44d9eb83c"},
-    {file = "bcrypt-4.0.1-pp37-pypy37_pp73-manylinux_2_24_x86_64.whl", hash = "sha256:67a97e1c405b24f19d08890e7ae0c4f7ce1e56a712a016746c8b2d7732d65d4b"},
-    {file = "bcrypt-4.0.1-pp37-pypy37_pp73-manylinux_2_28_x86_64.whl", hash = "sha256:b3b85202d95dd568efcb35b53936c5e3b3600c7cdcc6115ba461df3a8e89f38d"},
-    {file = "bcrypt-4.0.1-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:cbb03eec97496166b704ed663a53680ab57c5084b2fc98ef23291987b525cb7d"},
-    {file = "bcrypt-4.0.1-pp38-pypy38_pp73-manylinux_2_24_x86_64.whl", hash = "sha256:5ad4d32a28b80c5fa6671ccfb43676e8c1cc232887759d1cd7b6f56ea4355215"},
-    {file = "bcrypt-4.0.1-pp38-pypy38_pp73-manylinux_2_28_x86_64.whl", hash = "sha256:b57adba8a1444faf784394de3436233728a1ecaeb6e07e8c22c8848f179b893c"},
-    {file = "bcrypt-4.0.1-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:705b2cea8a9ed3d55b4491887ceadb0106acf7c6387699fca771af56b1cdeeda"},
-    {file = "bcrypt-4.0.1-pp39-pypy39_pp73-manylinux_2_24_x86_64.whl", hash = "sha256:2b3ac11cf45161628f1f3733263e63194f22664bf4d0c0f3ab34099c02134665"},
-    {file = "bcrypt-4.0.1-pp39-pypy39_pp73-manylinux_2_28_x86_64.whl", hash = "sha256:3100851841186c25f127731b9fa11909ab7b1df6fc4b9f8353f4f1fd952fbf71"},
-    {file = "bcrypt-4.0.1.tar.gz", hash = "sha256:27d375903ac8261cfe4047f6709d16f7d18d39b1ec92aaf72af989552a650ebd"},
+python-versions = ">=3.7"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
+files = [
+    {file = "bcrypt-4.2.1-cp37-abi3-macosx_10_12_universal2.whl", hash = "sha256:1340411a0894b7d3ef562fb233e4b6ed58add185228650942bdc885362f32c17"},
+    {file = "bcrypt-4.2.1-cp37-abi3-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:b1ee315739bc8387aa36ff127afc99120ee452924e0df517a8f3e4c0187a0f5f"},
+    {file = "bcrypt-4.2.1-cp37-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:8dbd0747208912b1e4ce730c6725cb56c07ac734b3629b60d4398f082ea718ad"},
+    {file = "bcrypt-4.2.1-cp37-abi3-manylinux_2_28_aarch64.whl", hash = "sha256:aaa2e285be097050dba798d537b6efd9b698aa88eef52ec98d23dcd6d7cf6fea"},
+    {file = "bcrypt-4.2.1-cp37-abi3-manylinux_2_28_x86_64.whl", hash = "sha256:76d3e352b32f4eeb34703370e370997065d28a561e4a18afe4fef07249cb4396"},
+    {file = "bcrypt-4.2.1-cp37-abi3-musllinux_1_1_aarch64.whl", hash = "sha256:b7703ede632dc945ed1172d6f24e9f30f27b1b1a067f32f68bf169c5f08d0425"},
+    {file = "bcrypt-4.2.1-cp37-abi3-musllinux_1_1_x86_64.whl", hash = "sha256:89df2aea2c43be1e1fa066df5f86c8ce822ab70a30e4c210968669565c0f4685"},
+    {file = "bcrypt-4.2.1-cp37-abi3-musllinux_1_2_aarch64.whl", hash = "sha256:04e56e3fe8308a88b77e0afd20bec516f74aecf391cdd6e374f15cbed32783d6"},
+    {file = "bcrypt-4.2.1-cp37-abi3-musllinux_1_2_x86_64.whl", hash = "sha256:cfdf3d7530c790432046c40cda41dfee8c83e29482e6a604f8930b9930e94139"},
+    {file = "bcrypt-4.2.1-cp37-abi3-win32.whl", hash = "sha256:adadd36274510a01f33e6dc08f5824b97c9580583bd4487c564fc4617b328005"},
+    {file = "bcrypt-4.2.1-cp37-abi3-win_amd64.whl", hash = "sha256:8c458cd103e6c5d1d85cf600e546a639f234964d0228909d8f8dbeebff82d526"},
+    {file = "bcrypt-4.2.1-cp39-abi3-macosx_10_12_universal2.whl", hash = "sha256:8ad2f4528cbf0febe80e5a3a57d7a74e6635e41af1ea5675282a33d769fba413"},
+    {file = "bcrypt-4.2.1-cp39-abi3-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:909faa1027900f2252a9ca5dfebd25fc0ef1417943824783d1c8418dd7d6df4a"},
+    {file = "bcrypt-4.2.1-cp39-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:cde78d385d5e93ece5479a0a87f73cd6fa26b171c786a884f955e165032b262c"},
+    {file = "bcrypt-4.2.1-cp39-abi3-manylinux_2_28_aarch64.whl", hash = "sha256:533e7f3bcf2f07caee7ad98124fab7499cb3333ba2274f7a36cf1daee7409d99"},
+    {file = "bcrypt-4.2.1-cp39-abi3-manylinux_2_28_x86_64.whl", hash = "sha256:687cf30e6681eeda39548a93ce9bfbb300e48b4d445a43db4298d2474d2a1e54"},
+    {file = "bcrypt-4.2.1-cp39-abi3-musllinux_1_1_aarch64.whl", hash = "sha256:041fa0155c9004eb98a232d54da05c0b41d4b8e66b6fc3cb71b4b3f6144ba837"},
+    {file = "bcrypt-4.2.1-cp39-abi3-musllinux_1_1_x86_64.whl", hash = "sha256:f85b1ffa09240c89aa2e1ae9f3b1c687104f7b2b9d2098da4e923f1b7082d331"},
+    {file = "bcrypt-4.2.1-cp39-abi3-musllinux_1_2_aarch64.whl", hash = "sha256:c6f5fa3775966cca251848d4d5393ab016b3afed251163c1436fefdec3b02c84"},
+    {file = "bcrypt-4.2.1-cp39-abi3-musllinux_1_2_x86_64.whl", hash = "sha256:807261df60a8b1ccd13e6599c779014a362ae4e795f5c59747f60208daddd96d"},
+    {file = "bcrypt-4.2.1-cp39-abi3-win32.whl", hash = "sha256:b588af02b89d9fad33e5f98f7838bf590d6d692df7153647724a7f20c186f6bf"},
+    {file = "bcrypt-4.2.1-cp39-abi3-win_amd64.whl", hash = "sha256:e84e0e6f8e40a242b11bce56c313edc2be121cec3e0ec2d76fce01f6af33c07c"},
+    {file = "bcrypt-4.2.1-pp310-pypy310_pp73-manylinux_2_28_aarch64.whl", hash = "sha256:76132c176a6d9953cdc83c296aeaed65e1a708485fd55abf163e0d9f8f16ce0e"},
+    {file = "bcrypt-4.2.1-pp310-pypy310_pp73-manylinux_2_28_x86_64.whl", hash = "sha256:e158009a54c4c8bc91d5e0da80920d048f918c61a581f0a63e4e93bb556d362f"},
+    {file = "bcrypt-4.2.1.tar.gz", hash = "sha256:6765386e3ab87f569b276988742039baab087b2cdb01e809d74e74503c2faafe"},
 ]
 
 [package.extras]
@@ -66,116 +76,141 @@ typecheck = ["mypy"]
 
 [[package]]
 name = "blinker"
-version = "1.6.3"
+version = "1.9.0"
 description = "Fast, simple object-to-object and broadcast signaling"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.9"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
-    {file = "blinker-1.6.3-py3-none-any.whl", hash = "sha256:296320d6c28b006eb5e32d4712202dbcdcbf5dc482da298c2f44881c43884aaa"},
-    {file = "blinker-1.6.3.tar.gz", hash = "sha256:152090d27c1c5c722ee7e48504b02d76502811ce02e1523553b4cf8c8b3d3a8d"},
+    {file = "blinker-1.9.0-py3-none-any.whl", hash = "sha256:ba0efaa9080b619ff2f3459d1d500c57bddea4a6b424b60a91141db6fd2f08bc"},
+    {file = "blinker-1.9.0.tar.gz", hash = "sha256:b4ce2265a7abece45e7cc896e98dbebe6cead56bcf805a3d23136d145f5445bf"},
 ]
 
 [[package]]
 name = "cachecontrol"
-version = "0.13.1"
+version = "0.14.2"
 description = "httplib2 caching for requests"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
-    {file = "cachecontrol-0.13.1-py3-none-any.whl", hash = "sha256:95dedbec849f46dda3137866dc28b9d133fc9af55f5b805ab1291833e4457aa4"},
-    {file = "cachecontrol-0.13.1.tar.gz", hash = "sha256:f012366b79d2243a6118309ce73151bf52a38d4a5dac8ea57f09bd29087e506b"},
+    {file = "cachecontrol-0.14.2-py3-none-any.whl", hash = "sha256:ebad2091bf12d0d200dfc2464330db638c5deb41d546f6d7aca079e87290f3b0"},
+    {file = "cachecontrol-0.14.2.tar.gz", hash = "sha256:7d47d19f866409b98ff6025b6a0fca8e4c791fb31abbd95f622093894ce903a2"},
 ]
 
 [package.dependencies]
-msgpack = ">=0.5.2"
+msgpack = ">=0.5.2,<2.0.0"
 requests = ">=2.16.0"
 
 [package.extras]
-dev = ["CacheControl[filecache,redis]", "black", "build", "cherrypy", "mypy", "pytest", "pytest-cov", "sphinx", "tox", "types-redis", "types-requests"]
+dev = ["CacheControl[filecache,redis]", "build", "cherrypy", "codespell[tomli]", "furo", "mypy", "pytest", "pytest-cov", "ruff", "sphinx", "sphinx-copybutton", "tox", "types-redis", "types-requests"]
 filecache = ["filelock (>=3.8.0)"]
 redis = ["redis (>=2.10.5)"]
 
 [[package]]
 name = "cachetools"
-version = "5.3.1"
+version = "5.5.0"
 description = "Extensible memoizing collections and decorators"
 optional = false
 python-versions = ">=3.7"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
-    {file = "cachetools-5.3.1-py3-none-any.whl", hash = "sha256:95ef631eeaea14ba2e36f06437f36463aac3a096799e876ee55e5cdccb102590"},
-    {file = "cachetools-5.3.1.tar.gz", hash = "sha256:dce83f2d9b4e1f732a8cd44af8e8fab2dbe46201467fc98b3ef8f269092bf62b"},
+    {file = "cachetools-5.5.0-py3-none-any.whl", hash = "sha256:02134e8439cdc2ffb62023ce1debca2944c3f289d66bb17ead3ab3dede74b292"},
+    {file = "cachetools-5.5.0.tar.gz", hash = "sha256:2cc24fb4cbe39633fb7badd9db9ca6295d766d9c2995f245725a46715d050f2a"},
 ]
 
 [[package]]
 name = "certifi"
-version = "2024.7.4"
+version = "2024.12.14"
 description = "Python package for providing Mozilla's CA Bundle."
 optional = false
 python-versions = ">=3.6"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
-    {file = "certifi-2024.7.4-py3-none-any.whl", hash = "sha256:c198e21b1289c2ab85ee4e67bb4b4ef3ead0892059901a8d5b622f24a1101e90"},
-    {file = "certifi-2024.7.4.tar.gz", hash = "sha256:5a1e7645bc0ec61a09e26c36f6106dd4cf40c6db3a1fb6352b0244e7fb057c7b"},
+    {file = "certifi-2024.12.14-py3-none-any.whl", hash = "sha256:1275f7a45be9464efc1173084eaa30f866fe2e47d389406136d332ed4967ec56"},
+    {file = "certifi-2024.12.14.tar.gz", hash = "sha256:b650d30f370c2b724812bee08008be0c4163b163ddaec3f2546c1caf65f191db"},
 ]
 
 [[package]]
 name = "cffi"
-version = "1.16.0"
+version = "1.17.1"
 description = "Foreign Function Interface for Python calling C code."
 optional = false
 python-versions = ">=3.8"
-files = [
-    {file = "cffi-1.16.0-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:6b3d6606d369fc1da4fd8c357d026317fbb9c9b75d36dc16e90e84c26854b088"},
-    {file = "cffi-1.16.0-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:ac0f5edd2360eea2f1daa9e26a41db02dd4b0451b48f7c318e217ee092a213e9"},
-    {file = "cffi-1.16.0-cp310-cp310-manylinux_2_12_i686.manylinux2010_i686.manylinux_2_17_i686.manylinux2014_i686.whl", hash = "sha256:7e61e3e4fa664a8588aa25c883eab612a188c725755afff6289454d6362b9673"},
-    {file = "cffi-1.16.0-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:a72e8961a86d19bdb45851d8f1f08b041ea37d2bd8d4fd19903bc3083d80c896"},
-    {file = "cffi-1.16.0-cp310-cp310-manylinux_2_17_ppc64le.manylinux2014_ppc64le.whl", hash = "sha256:5b50bf3f55561dac5438f8e70bfcdfd74543fd60df5fa5f62d94e5867deca684"},
-    {file = "cffi-1.16.0-cp310-cp310-manylinux_2_17_s390x.manylinux2014_s390x.whl", hash = "sha256:7651c50c8c5ef7bdb41108b7b8c5a83013bfaa8a935590c5d74627c047a583c7"},
-    {file = "cffi-1.16.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:e4108df7fe9b707191e55f33efbcb2d81928e10cea45527879a4749cbe472614"},
-    {file = "cffi-1.16.0-cp310-cp310-musllinux_1_1_i686.whl", hash = "sha256:32c68ef735dbe5857c810328cb2481e24722a59a2003018885514d4c09af9743"},
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 [package.dependencies]
@@ -185,8 +220,10 @@ pycparser = "*"
 name = "cfgv"
 version = "3.4.0"
 description = "Validate configuration and produce human readable error messages."
-optional = false
+optional = true
 python-versions = ">=3.8"
+groups = ["main"]
+markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"pre-commit\""
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@@ -194,112 +231,118 @@ files = [
 
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+version = "3.4.1"
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+version = "8.1.8"
 description = "Composable command line interface toolkit"
 optional = false
 python-versions = ">=3.7"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
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 [package.dependencies]
@@ -311,6 +354,8 @@ version = "0.4.6"
 description = "Cross-platform colored terminal text."
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,!=3.6.*,>=2.7"
+groups = ["main"]
+markers = "(extra == \"pytest-cov\" or platform_system == \"Windows\" or extra == \"pytest-mock\" or extra == \"pytest\" or extra == \"pytest-xdist\") and (sys_platform == \"win32\" or platform_system == \"Windows\") and (python_version <= \"3.11\" or python_version >= \"3.12\")"
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@@ -322,6 +367,8 @@ version = "15.0.1"
 description = "Colored terminal output for Python's logging module"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
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@@ -335,61 +382,75 @@ cron = ["capturer (>=2.4)"]
 
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 ]
 
 [package.dependencies]
@@ -400,22 +461,24 @@ toml = ["tomli"]
 
 [[package]]
 name = "coveralls"
-version = "3.3.1"
+version = "4.0.1"
 description = "Show coverage stats online via coveralls.io"
-optional = false
-python-versions = ">= 3.5"
+optional = true
+python-versions = "<3.13,>=3.8"
+groups = ["main"]
+markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"coveralls\""
 files = [
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 [package.dependencies]
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-docopt = ">=0.6.1"
-requests = ">=1.0.0"
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+docopt = ">=0.6.1,<0.7.0"
+requests = ">=1.0.0,<3.0.0"
 
 [package.extras]
-yaml = ["PyYAML (>=3.10)"]
+yaml = ["pyyaml (>=3.10,<7.0)"]
 
 [[package]]
 name = "cryptography"
@@ -423,6 +486,8 @@ version = "43.0.3"
 description = "cryptography is a package which provides cryptographic recipes and primitives to Python developers."
 optional = false
 python-versions = ">=3.7"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
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@@ -468,32 +533,36 @@ test-randomorder = ["pytest-randomly"]
 
 [[package]]
 name = "distlib"
-version = "0.3.7"
+version = "0.3.9"
 description = "Distribution utilities"
-optional = false
+optional = true
 python-versions = "*"
+groups = ["main"]
+markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"pre-commit\""
 files = [
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 ]
 
 [[package]]
 name = "dnspython"
-version = "2.6.1"
+version = "2.7.0"
 description = "DNS toolkit"
 optional = false
-python-versions = ">=3.8"
+python-versions = ">=3.9"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
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 ]
 
 [package.extras]
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-dnssec = ["cryptography (>=41)"]
+dev = ["black (>=23.1.0)", "coverage (>=7.0)", "flake8 (>=7)", "hypercorn (>=0.16.0)", "mypy (>=1.8)", "pylint (>=3)", "pytest (>=7.4)", "pytest-cov (>=4.1.0)", "quart-trio (>=0.11.0)", "sphinx (>=7.2.0)", "sphinx-rtd-theme (>=2.0.0)", "twine (>=4.0.0)", "wheel (>=0.42.0)"]
+dnssec = ["cryptography (>=43)"]
 doh = ["h2 (>=4.1.0)", "httpcore (>=1.0.0)", "httpx (>=0.26.0)"]
-doq = ["aioquic (>=0.9.25)"]
-idna = ["idna (>=3.6)"]
+doq = ["aioquic (>=1.0.0)"]
+idna = ["idna (>=3.7)"]
 trio = ["trio (>=0.23)"]
 wmi = ["wmi (>=1.5.1)"]
 
@@ -501,8 +570,10 @@ wmi = ["wmi (>=1.5.1)"]
 name = "docopt"
 version = "0.6.2"
 description = "Pythonic argument parser, that will make you smile"
-optional = false
+optional = true
 python-versions = "*"
+groups = ["main"]
+markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"coveralls\""
 files = [
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 ]
@@ -513,6 +584,8 @@ version = "2.2.0"
 description = "A robust email address syntax and deliverability validation library."
 optional = false
 python-versions = ">=3.8"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
     {file = "email_validator-2.2.0-py3-none-any.whl", hash = "sha256:561977c2d73ce3611850a06fa56b414621e0c8faa9d66f2611407d87465da631"},
     {file = "email_validator-2.2.0.tar.gz", hash = "sha256:cb690f344c617a714f22e66ae771445a1ceb46821152df8e165c5f9a364582b7"},
@@ -524,24 +597,28 @@ idna = ">=2.0.0"
 
 [[package]]
 name = "et-xmlfile"
-version = "1.1.0"
+version = "2.0.0"
 description = "An implementation of lxml.xmlfile for the standard library"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.8"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
-    {file = "et_xmlfile-1.1.0-py3-none-any.whl", hash = "sha256:a2ba85d1d6a74ef63837eed693bcb89c3f752169b0e3e7ae5b16ca5e1b3deada"},
-    {file = "et_xmlfile-1.1.0.tar.gz", hash = "sha256:8eb9e2bc2f8c97e37a2dc85a09ecdcdec9d8a396530a6d5a33b30b9a92da0c5c"},
+    {file = "et_xmlfile-2.0.0-py3-none-any.whl", hash = "sha256:7a91720bc756843502c3b7504c77b8fe44217c85c537d85037f0f536151b2caa"},
+    {file = "et_xmlfile-2.0.0.tar.gz", hash = "sha256:dab3f4764309081ce75662649be815c4c9081e88f0837825f90fd28317d4da54"},
 ]
 
 [[package]]
 name = "exceptiongroup"
-version = "1.1.3"
+version = "1.2.2"
 description = "Backport of PEP 654 (exception groups)"
-optional = false
+optional = true
 python-versions = ">=3.7"
+groups = ["main"]
+markers = "(extra == \"pytest-cov\" or extra == \"pytest-mock\" or extra == \"pytest\" or extra == \"pytest-xdist\") and python_version < \"3.11\""
 files = [
-    {file = "exceptiongroup-1.1.3-py3-none-any.whl", hash = "sha256:343280667a4585d195ca1cf9cef84a4e178c4b6cf2274caef9859782b567d5e3"},
-    {file = "exceptiongroup-1.1.3.tar.gz", hash = "sha256:097acd85d473d75af5bb98e41b61ff7fe35efe6675e4f9370ec6ec5126d160e9"},
+    {file = "exceptiongroup-1.2.2-py3-none-any.whl", hash = "sha256:3111b9d131c238bec2f8f516e123e14ba243563fb135d3fe885990585aa7795b"},
+    {file = "exceptiongroup-1.2.2.tar.gz", hash = "sha256:47c2edf7c6738fafb49fd34290706d1a1a2f4d1c6df275526b62cbb4aa5393cc"},
 ]
 
 [package.extras]
@@ -549,13 +626,15 @@ test = ["pytest (>=6)"]
 
 [[package]]
 name = "execnet"
-version = "2.0.2"
+version = "2.1.1"
 description = "execnet: rapid multi-Python deployment"
-optional = false
-python-versions = ">=3.7"
+optional = true
+python-versions = ">=3.8"
+groups = ["main"]
+markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"pytest-xdist\""
 files = [
-    {file = "execnet-2.0.2-py3-none-any.whl", hash = "sha256:88256416ae766bc9e8895c76a87928c0012183da3cc4fc18016e6f050e025f41"},
-    {file = "execnet-2.0.2.tar.gz", hash = "sha256:cc59bc4423742fd71ad227122eb0dd44db51efb3dc4095b45ac9a08c770096af"},
+    {file = "execnet-2.1.1-py3-none-any.whl", hash = "sha256:26dee51f1b80cebd6d0ca8e74dd8745419761d3bef34163928cbebbdc4749fdc"},
+    {file = "execnet-2.1.1.tar.gz", hash = "sha256:5189b52c6121c24feae288166ab41b32549c7e2348652736540b9e6e7d4e72e3"},
 ]
 
 [package.extras]
@@ -563,38 +642,42 @@ testing = ["hatch", "pre-commit", "pytest", "tox"]
 
 [[package]]
 name = "filelock"
-version = "3.12.4"
+version = "3.16.1"
 description = "A platform independent file lock."
-optional = false
+optional = true
 python-versions = ">=3.8"
+groups = ["main"]
+markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"pre-commit\""
 files = [
-    {file = "filelock-3.12.4-py3-none-any.whl", hash = "sha256:08c21d87ded6e2b9da6728c3dff51baf1dcecf973b768ef35bcbc3447edb9ad4"},
-    {file = "filelock-3.12.4.tar.gz", hash = "sha256:2e6f249f1f3654291606e046b09f1fd5eac39b360664c27f5aad072012f8bcbd"},
+    {file = "filelock-3.16.1-py3-none-any.whl", hash = "sha256:2082e5703d51fbf98ea75855d9d5527e33d8ff23099bec374a134febee6946b0"},
+    {file = "filelock-3.16.1.tar.gz", hash = "sha256:c249fbfcd5db47e5e2d6d62198e565475ee65e4831e2561c8e313fa7eb961435"},
 ]
 
 [package.extras]
-docs = ["furo (>=2023.7.26)", "sphinx (>=7.1.2)", "sphinx-autodoc-typehints (>=1.24)"]
-testing = ["covdefaults (>=2.3)", "coverage (>=7.3)", "diff-cover (>=7.7)", "pytest (>=7.4)", "pytest-cov (>=4.1)", "pytest-mock (>=3.11.1)", "pytest-timeout (>=2.1)"]
-typing = ["typing-extensions (>=4.7.1)"]
+docs = ["furo (>=2024.8.6)", "sphinx (>=8.0.2)", "sphinx-autodoc-typehints (>=2.4.1)"]
+testing = ["covdefaults (>=2.3)", "coverage (>=7.6.1)", "diff-cover (>=9.2)", "pytest (>=8.3.3)", "pytest-asyncio (>=0.24)", "pytest-cov (>=5)", "pytest-mock (>=3.14)", "pytest-timeout (>=2.3.1)", "virtualenv (>=20.26.4)"]
+typing = ["typing-extensions (>=4.12.2)"]
 
 [[package]]
 name = "flask"
-version = "3.0.0"
+version = "3.1.0"
 description = "A simple framework for building complex web applications."
 optional = false
-python-versions = ">=3.8"
+python-versions = ">=3.9"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
-    {file = "flask-3.0.0-py3-none-any.whl", hash = "sha256:21128f47e4e3b9d597a3e8521a329bf56909b690fcc3fa3e477725aa81367638"},
-    {file = "flask-3.0.0.tar.gz", hash = "sha256:cfadcdb638b609361d29ec22360d6070a77d7463dcb3ab08d2c2f2f168845f58"},
+    {file = "flask-3.1.0-py3-none-any.whl", hash = "sha256:d667207822eb83f1c4b50949b1623c8fc8d51f2341d65f72e1a1815397551136"},
+    {file = "flask-3.1.0.tar.gz", hash = "sha256:5f873c5184c897c8d9d1b05df1e3d01b14910ce69607a117bd3277098a5836ac"},
 ]
 
 [package.dependencies]
-blinker = ">=1.6.2"
+blinker = ">=1.9"
 click = ">=8.1.3"
-importlib-metadata = {version = ">=3.6.0", markers = "python_version < \"3.10\""}
-itsdangerous = ">=2.1.2"
+importlib-metadata = {version = ">=3.6", markers = "python_version < \"3.10\""}
+itsdangerous = ">=2.2"
 Jinja2 = ">=3.1.2"
-Werkzeug = ">=3.0.0"
+Werkzeug = ">=3.1"
 
 [package.extras]
 async = ["asgiref (>=3.2)"]
@@ -606,6 +689,8 @@ version = "1.6.1"
 description = "Simple and extensible admin interface framework for Flask"
 optional = false
 python-versions = ">=3.6"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
     {file = "Flask-Admin-1.6.1.tar.gz", hash = "sha256:24cae2af832b6a611a01d7dc35f42d266c1d6c75a426b869d8cb241b78233369"},
     {file = "Flask_Admin-1.6.1-py3-none-any.whl", hash = "sha256:fd8190f1ec3355913a22739c46ed3623f1d82b8112cde324c60a6fc9b21c9406"},
@@ -625,6 +710,8 @@ version = "5.0.0"
 description = "A Flask extension adding a decorator for CORS support"
 optional = false
 python-versions = "*"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
     {file = "Flask_Cors-5.0.0-py2.py3-none-any.whl", hash = "sha256:b9e307d082a9261c100d8fb0ba909eec6a228ed1b60a8315fd85f783d61910bc"},
     {file = "flask_cors-5.0.0.tar.gz", hash = "sha256:5aadb4b950c4e93745034594d9f3ea6591f734bb3662e16e255ffbf5e89c88ef"},
@@ -635,13 +722,15 @@ Flask = ">=0.9"
 
 [[package]]
 name = "flask-dance"
-version = "7.0.0"
+version = "7.1.0"
 description = "Doing the OAuth dance with style using Flask, requests, and oauthlib"
 optional = false
 python-versions = ">=3.6"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
-    {file = "Flask-Dance-7.0.0.tar.gz", hash = "sha256:a37dec5c3a21f13966178285d5c10691cd72203dcef8a01db802fef6287e716d"},
-    {file = "flask_dance-7.0.0-py3-none-any.whl", hash = "sha256:935f5806d587eed94b53cf356ee921466bb32ba83405ed5a4e8ac8ea859620dc"},
+    {file = "flask_dance-7.1.0-py3-none-any.whl", hash = "sha256:81599328a2b3604fd4332b3d41a901cf36980c2067e5e38c44ce3b85c4e1ae9c"},
+    {file = "flask_dance-7.1.0.tar.gz", hash = "sha256:6d0510e284f3d6ff05af918849791b17ef93a008628ec33f3a80578a44b51674"},
 ]
 
 [package.dependencies]
@@ -653,20 +742,22 @@ urlobject = "*"
 Werkzeug = "*"
 
 [package.extras]
-docs = ["Flask-Sphinx-Themes", "betamax", "pytest", "sphinx (>=1.3)", "sphinxcontrib-seqdiag", "sphinxcontrib-spelling", "sqlalchemy (>=1.3.11)"]
+docs = ["Flask-Sphinx-Themes", "betamax", "pillow (<=9.5)", "pytest", "sphinx (>=1.3)", "sphinxcontrib-seqdiag", "sphinxcontrib-spelling", "sqlalchemy (>=1.3.11)"]
 signals = ["blinker"]
 sqla = ["sqlalchemy (>=1.3.11)"]
 test = ["betamax", "coverage", "flask-caching", "flask-login", "flask-sqlalchemy", "freezegun", "oauthlib[signedtoken]", "pytest", "pytest-mock", "responses", "sqlalchemy (>=1.3.11)"]
 
 [[package]]
 name = "flask-wtf"
-version = "1.2.1"
+version = "1.2.2"
 description = "Form rendering, validation, and CSRF protection for Flask with WTForms."
 optional = false
-python-versions = ">=3.8"
+python-versions = ">=3.9"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
-    {file = "flask_wtf-1.2.1-py3-none-any.whl", hash = "sha256:fa6793f2fb7e812e0fe9743b282118e581fb1b6c45d414b8af05e659bd653287"},
-    {file = "flask_wtf-1.2.1.tar.gz", hash = "sha256:8bb269eb9bb46b87e7c8233d7e7debdf1f8b74bf90cc1789988c29b37a97b695"},
+    {file = "flask_wtf-1.2.2-py3-none-any.whl", hash = "sha256:e93160c5c5b6b571cf99300b6e01b72f9a101027cab1579901f8b10c5daf0b70"},
+    {file = "flask_wtf-1.2.2.tar.gz", hash = "sha256:79d2ee1e436cf570bccb7d916533fa18757a2f18c290accffab1b9a0b684666b"},
 ]
 
 [package.dependencies]
@@ -683,6 +774,8 @@ version = "1.0.0"
 description = "Python interface to the Illumina Basespace Clarity LIMS (Laboratory Information Management System) server via its REST API."
 optional = false
 python-versions = "*"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
     {file = "genologics-1.0.0-py3-none-any.whl", hash = "sha256:3f3557f60978449af27ae18afd877482ad7ea4978a77e4aa233cb2260feb30db"},
     {file = "genologics-1.0.0.tar.gz", hash = "sha256:59bd07ea5b6d0fb47b26404ce98632a2c58ba85897522cb4d95fea233cde8122"},
@@ -693,13 +786,15 @@ requests = "*"
 
 [[package]]
 name = "google-auth"
-version = "2.23.2"
+version = "2.37.0"
 description = "Google Authentication Library"
 optional = false
 python-versions = ">=3.7"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
-    {file = "google-auth-2.23.2.tar.gz", hash = "sha256:5a9af4be520ba33651471a0264eead312521566f44631cbb621164bc30c8fd40"},
-    {file = "google_auth-2.23.2-py2.py3-none-any.whl", hash = "sha256:c2e253347579d483004f17c3bd0bf92e611ef6c7ba24d41c5c59f2e7aeeaf088"},
+    {file = "google_auth-2.37.0-py2.py3-none-any.whl", hash = "sha256:42664f18290a6be591be5329a96fe30184be1a1badb7292a7f686a9659de9ca0"},
+    {file = "google_auth-2.37.0.tar.gz", hash = "sha256:0054623abf1f9c83492c63d3f47e77f0a544caa3d40b2d98e099a611c2dd5d00"},
 ]
 
 [package.dependencies]
@@ -709,95 +804,111 @@ rsa = ">=3.1.4,<5"
 
 [package.extras]
 aiohttp = ["aiohttp (>=3.6.2,<4.0.0.dev0)", "requests (>=2.20.0,<3.0.0.dev0)"]
-enterprise-cert = ["cryptography (==36.0.2)", "pyopenssl (==22.0.0)"]
+enterprise-cert = ["cryptography", "pyopenssl"]
+pyjwt = ["cryptography (>=38.0.3)", "pyjwt (>=2.0)"]
 pyopenssl = ["cryptography (>=38.0.3)", "pyopenssl (>=20.0.0)"]
 reauth = ["pyu2f (>=0.1.5)"]
 requests = ["requests (>=2.20.0,<3.0.0.dev0)"]
 
 [[package]]
 name = "greenlet"
-version = "3.0.0"
+version = "3.1.1"
 description = "Lightweight in-process concurrent programming"
 optional = false
 python-versions = ">=3.7"
-files = [
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+    {file = "greenlet-3.1.1.tar.gz", hash = "sha256:4ce3ac6cdb6adf7946475d7ef31777c26d94bccc377e070a7986bd2d5c515467"},
 ]
 
 [package.extras]
-docs = ["Sphinx"]
+docs = ["Sphinx", "furo"]
 test = ["objgraph", "psutil"]
 
 [[package]]
 name = "gunicorn"
-version = "22.0.0"
+version = "23.0.0"
 description = "WSGI HTTP Server for UNIX"
 optional = false
 python-versions = ">=3.7"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
-    {file = "gunicorn-22.0.0-py3-none-any.whl", hash = "sha256:350679f91b24062c86e386e198a15438d53a7a8207235a78ba1b53df4c4378d9"},
-    {file = "gunicorn-22.0.0.tar.gz", hash = "sha256:4a0b436239ff76fb33f11c07a16482c521a7e09c1ce3cc293c2330afe01bec63"},
+    {file = "gunicorn-23.0.0-py3-none-any.whl", hash = "sha256:ec400d38950de4dfd418cff8328b2c8faed0edb0d517d3394e457c317908ca4d"},
+    {file = "gunicorn-23.0.0.tar.gz", hash = "sha256:f014447a0101dc57e294f6c18ca6b40227a4c90e9bdb586042628030cba004ec"},
 ]
 
 [package.dependencies]
@@ -812,18 +923,21 @@ tornado = ["tornado (>=0.2)"]
 
 [[package]]
 name = "housekeeper"
-version = "4.11.3"
+version = "4.13.2"
 description = "Housekeeper takes care of files"
 optional = false
 python-versions = "*"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
-    {file = "housekeeper-4.11.3-py2.py3-none-any.whl", hash = "sha256:35d0b3155ad166edb0c7d384d5ef1246bd660c1637276926addbe9793a01b68f"},
-    {file = "housekeeper-4.11.3.tar.gz", hash = "sha256:fd8b112e8be78aaf0a77695e53f4058cb4922c788d4daa20305db26a572d0035"},
+    {file = "housekeeper-4.13.2-py2.py3-none-any.whl", hash = "sha256:c62a470c0ac8eff591619335e151656cc05e32412ae1d222434707409cb25922"},
+    {file = "housekeeper-4.13.2.tar.gz", hash = "sha256:b81477f592f77484b5dfccb4ffdda55a7609bc455b25db5bfc7d3d5cd962a52a"},
 ]
 
 [package.dependencies]
 Click = "*"
 coloredlogs = "*"
+cryptography = "*"
 marshmallow = "*"
 pymysql = "*"
 pyyaml = "*"
@@ -836,6 +950,8 @@ version = "10.0"
 description = "Human friendly output for text interfaces using Python"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
     {file = "humanfriendly-10.0-py2.py3-none-any.whl", hash = "sha256:1697e1a8a8f550fd43c2865cd84542fc175a61dcb779b6fee18cf6b6ccba1477"},
     {file = "humanfriendly-10.0.tar.gz", hash = "sha256:6b0b831ce8f15f7300721aa49829fc4e83921a9a301cc7f606be6686a2288ddc"},
@@ -846,13 +962,15 @@ pyreadline3 = {version = "*", markers = "sys_platform == \"win32\" and python_ve
 
 [[package]]
 name = "identify"
-version = "2.5.30"
+version = "2.6.5"
 description = "File identification library for Python"
-optional = false
-python-versions = ">=3.8"
+optional = true
+python-versions = ">=3.9"
+groups = ["main"]
+markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"pre-commit\""
 files = [
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-    {file = "identify-2.5.30.tar.gz", hash = "sha256:f302a4256a15c849b91cfcdcec052a8ce914634b2f77ae87dad29cd749f2d88d"},
+    {file = "identify-2.6.5-py2.py3-none-any.whl", hash = "sha256:14181a47091eb75b337af4c23078c9d09225cd4c48929f521f3bf16b09d02566"},
+    {file = "identify-2.6.5.tar.gz", hash = "sha256:c10b33f250e5bba374fae86fb57f3adcebf1161bce7cdf92031915fd480c13bc"},
 ]
 
 [package.extras]
@@ -860,40 +978,53 @@ license = ["ukkonen"]
 
 [[package]]
 name = "idna"
-version = "3.7"
+version = "3.10"
 description = "Internationalized Domain Names in Applications (IDNA)"
 optional = false
-python-versions = ">=3.5"
+python-versions = ">=3.6"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
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-    {file = "idna-3.7.tar.gz", hash = "sha256:028ff3aadf0609c1fd278d8ea3089299412a7a8b9bd005dd08b9f8285bcb5cfc"},
+    {file = "idna-3.10-py3-none-any.whl", hash = "sha256:946d195a0d259cbba61165e88e65941f16e9b36ea6ddb97f00452bae8b1287d3"},
+    {file = "idna-3.10.tar.gz", hash = "sha256:12f65c9b470abda6dc35cf8e63cc574b1c52b11df2c86030af0ac09b01b13ea9"},
 ]
 
+[package.extras]
+all = ["flake8 (>=7.1.1)", "mypy (>=1.11.2)", "pytest (>=8.3.2)", "ruff (>=0.6.2)"]
+
 [[package]]
 name = "importlib-metadata"
-version = "6.8.0"
+version = "8.5.0"
 description = "Read metadata from Python packages"
 optional = false
 python-versions = ">=3.8"
+groups = ["main"]
+markers = "python_version < \"3.10\""
 files = [
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+    {file = "importlib_metadata-8.5.0.tar.gz", hash = "sha256:71522656f0abace1d072b9e5481a48f07c138e00f079c38c8f883823f9c26bd7"},
 ]
 
 [package.dependencies]
-zipp = ">=0.5"
+zipp = ">=3.20"
 
 [package.extras]
-docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
+check = ["pytest-checkdocs (>=2.4)", "pytest-ruff (>=0.2.1)"]
+cover = ["pytest-cov"]
+doc = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
+enabler = ["pytest-enabler (>=2.2)"]
 perf = ["ipython"]
-testing = ["flufl.flake8", "importlib-resources (>=1.3)", "packaging", "pyfakefs", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-mypy (>=0.9.1)", "pytest-perf (>=0.9.2)", "pytest-ruff"]
+test = ["flufl.flake8", "importlib-resources (>=1.3)", "jaraco.test (>=5.4)", "packaging", "pyfakefs", "pytest (>=6,!=8.1.*)", "pytest-perf (>=0.9.2)"]
+type = ["pytest-mypy"]
 
 [[package]]
 name = "iniconfig"
 version = "2.0.0"
 description = "brain-dead simple config-ini parsing"
-optional = false
+optional = true
 python-versions = ">=3.7"
+groups = ["main"]
+markers = "(extra == \"pytest-cov\" or extra == \"pytest-mock\" or extra == \"pytest\" or extra == \"pytest-xdist\") and (python_version <= \"3.11\" or python_version >= \"3.12\")"
 files = [
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@@ -901,24 +1032,28 @@ files = [
 
 [[package]]
 name = "itsdangerous"
-version = "2.1.2"
+version = "2.2.0"
 description = "Safely pass data to untrusted environments and back."
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
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+    {file = "itsdangerous-2.2.0-py3-none-any.whl", hash = "sha256:c6242fc49e35958c8b15141343aa660db5fc54d4f13a1db01a3f5891b98700ef"},
+    {file = "itsdangerous-2.2.0.tar.gz", hash = "sha256:e0050c0b7da1eea53ffaf149c0cfbb5c6e2e2b69c4bef22c81fa6eb73e5f6173"},
 ]
 
 [[package]]
 name = "jinja2"
-version = "3.1.4"
+version = "3.1.5"
 description = "A very fast and expressive template engine."
 optional = false
 python-versions = ">=3.7"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
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+    {file = "jinja2-3.1.5.tar.gz", hash = "sha256:8fefff8dc3034e27bb80d67c671eb8a9bc424c0ef4c0826edbff304cceff43bb"},
 ]
 
 [package.dependencies]
@@ -929,120 +1064,171 @@ i18n = ["Babel (>=2.7)"]
 
 [[package]]
 name = "lxml"
-version = "4.9.3"
+version = "5.3.0"
 description = "Powerful and Pythonic XML processing library combining libxml2/libxslt with the ElementTree API."
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, != 3.4.*"
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 description = "Python port of markdown-it. Markdown parsing, done right!"
 optional = false
 python-versions = ">=3.8"
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 ]
 
 [[package]]
 name = "marshmallow"
-version = "3.20.1"
+version = "3.25.1"
 description = "A lightweight library for converting complex datatypes to and from native Python datatypes."
 optional = false
-python-versions = ">=3.8"
+python-versions = ">=3.9"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
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 ]
 
 [package.dependencies]
 packaging = ">=17.0"
 
 [package.extras]
-dev = ["flake8 (==6.0.0)", "flake8-bugbear (==23.7.10)", "mypy (==1.4.1)", "pre-commit (>=2.4,<4.0)", "pytest", "pytz", "simplejson", "tox"]
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-lint = ["flake8 (==6.0.0)", "flake8-bugbear (==23.7.10)", "mypy (==1.4.1)", "pre-commit (>=2.4,<4.0)"]
-tests = ["pytest", "pytz", "simplejson"]
+dev = ["marshmallow[tests]", "pre-commit (>=3.5,<5.0)", "tox"]
+docs = ["autodocsumm (==0.2.14)", "furo (==2024.8.6)", "sphinx (==8.1.3)", "sphinx-copybutton (==0.5.2)", "sphinx-issues (==5.0.0)", "sphinxext-opengraph (==0.9.1)"]
+tests = ["pytest", "simplejson"]
 
 [[package]]
 name = "mdurl"
@@ -1172,6 +1364,8 @@ version = "0.1.2"
 description = "Markdown URL utilities"
 optional = false
 python-versions = ">=3.7"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
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     {file = "mdurl-0.1.2.tar.gz", hash = "sha256:bb413d29f5eea38f31dd4754dd7377d4465116fb207585f97bf925588687c1ba"},
@@ -1181,8 +1375,10 @@ files = [
 name = "mock"
 version = "5.1.0"
 description = "Rolling backport of unittest.mock for all Pythons"
-optional = false
+optional = true
 python-versions = ">=3.6"
+groups = ["main"]
+markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"mock\""
 files = [
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@@ -1195,122 +1391,212 @@ test = ["pytest", "pytest-cov"]
 
 [[package]]
 name = "msgpack"
-version = "1.0.7"
+version = "1.1.0"
 description = "MessagePack serializer"
 optional = false
 python-versions = ">=3.8"
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 python-versions = ">=3.6"
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 [package.dependencies]
@@ -1396,31 +1707,32 @@ numpy = [
 ]
 python-dateutil = ">=2.8.2"
 pytz = ">=2020.1"
-tzdata = ">=2022.1"
+tzdata = ">=2022.7"
 
 [package.extras]
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-compression = ["zstandard (>=0.17.0)"]
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-xml = ["lxml (>=4.8.0)"]
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+hdf5 = ["tables (>=3.8.0)"]
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+plot = ["matplotlib (>=3.6.3)"]
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+pyarrow = ["pyarrow (>=10.0.1)"]
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+sql-other = ["SQLAlchemy (>=2.0.0)", "adbc-driver-postgresql (>=0.8.0)", "adbc-driver-sqlite (>=0.8.0)"]
+test = ["hypothesis (>=6.46.1)", "pytest (>=7.3.2)", "pytest-xdist (>=2.2.0)"]
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 [[package]]
 name = "paramiko"
@@ -1428,6 +1740,8 @@ version = "3.5.0"
 description = "SSH2 protocol library"
 optional = false
 python-versions = ">=3.6"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
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@@ -1449,34 +1763,41 @@ version = "2.6"
 description = "Generate human-readable, random object names"
 optional = false
 python-versions = "*"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
     {file = "petname-2.6.tar.gz", hash = "sha256:981c31ef772356a373640d1bb7c67c102e0159eda14578c67a1c99d5b34c9e4c"},
 ]
 
 [[package]]
 name = "platformdirs"
-version = "3.11.0"
-description = "A small Python package for determining appropriate platform-specific dirs, e.g. a \"user data dir\"."
-optional = false
-python-versions = ">=3.7"
+version = "4.3.6"
+description = "A small Python package for determining appropriate platform-specific dirs, e.g. a `user data dir`."
+optional = true
+python-versions = ">=3.8"
+groups = ["main"]
+markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"pre-commit\""
 files = [
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+    {file = "platformdirs-4.3.6.tar.gz", hash = "sha256:357fb2acbc885b0419afd3ce3ed34564c13c9b95c89360cd9563f73aa5e2b907"},
 ]
 
 [package.extras]
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-test = ["appdirs (==1.4.4)", "covdefaults (>=2.3)", "pytest (>=7.4)", "pytest-cov (>=4.1)", "pytest-mock (>=3.11.1)"]
+docs = ["furo (>=2024.8.6)", "proselint (>=0.14)", "sphinx (>=8.0.2)", "sphinx-autodoc-typehints (>=2.4)"]
+test = ["appdirs (==1.4.4)", "covdefaults (>=2.3)", "pytest (>=8.3.2)", "pytest-cov (>=5)", "pytest-mock (>=3.14)"]
+type = ["mypy (>=1.11.2)"]
 
 [[package]]
 name = "pluggy"
-version = "1.3.0"
+version = "1.5.0"
 description = "plugin and hook calling mechanisms for python"
-optional = false
+optional = true
 python-versions = ">=3.8"
+groups = ["main"]
+markers = "(extra == \"pytest-cov\" or extra == \"pytest-mock\" or extra == \"pytest\" or extra == \"pytest-xdist\") and (python_version <= \"3.11\" or python_version >= \"3.12\")"
 files = [
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+    {file = "pluggy-1.5.0-py3-none-any.whl", hash = "sha256:44e1ad92c8ca002de6377e165f3e0f1be63266ab4d554740532335b9d75ea669"},
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 ]
 
 [package.extras]
@@ -1485,13 +1806,15 @@ testing = ["pytest", "pytest-benchmark"]
 
 [[package]]
 name = "pre-commit"
-version = "3.4.0"
+version = "4.0.1"
 description = "A framework for managing and maintaining multi-language pre-commit hooks."
-optional = false
-python-versions = ">=3.8"
+optional = true
+python-versions = ">=3.9"
+groups = ["main"]
+markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"pre-commit\""
 files = [
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 ]
 
 [package.dependencies]
@@ -1503,64 +1826,76 @@ virtualenv = ">=20.10.0"
 
 [[package]]
 name = "psutil"
-version = "5.9.5"
+version = "6.1.1"
 description = "Cross-platform lib for process and system monitoring in Python."
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
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+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
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 ]
 
 [package.extras]
-test = ["enum34", "ipaddress", "mock", "pywin32", "wmi"]
+dev = ["abi3audit", "black", "check-manifest", "coverage", "packaging", "pylint", "pyperf", "pypinfo", "pytest-cov", "requests", "rstcheck", "ruff", "sphinx", "sphinx_rtd_theme", "toml-sort", "twine", "virtualenv", "vulture", "wheel"]
+test = ["pytest", "pytest-xdist", "setuptools"]
 
 [[package]]
 name = "pyasn1"
-version = "0.5.0"
+version = "0.6.1"
 description = "Pure-Python implementation of ASN.1 types and DER/BER/CER codecs (X.208)"
 optional = false
-python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,>=2.7"
+python-versions = ">=3.8"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
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 ]
 
 [[package]]
 name = "pyasn1-modules"
-version = "0.3.0"
+version = "0.4.1"
 description = "A collection of ASN.1-based protocols modules"
 optional = false
-python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,>=2.7"
+python-versions = ">=3.8"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
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 ]
 
 [package.dependencies]
-pyasn1 = ">=0.4.6,<0.6.0"
+pyasn1 = ">=0.4.6,<0.7.0"
 
 [[package]]
 name = "pycparser"
-version = "2.21"
+version = "2.22"
 description = "C parser in Python"
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
+python-versions = ">=3.8"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
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-    {file = "pycparser-2.21.tar.gz", hash = "sha256:e644fdec12f7872f86c58ff790da456218b10f863970249516d60a5eaca77206"},
+    {file = "pycparser-2.22-py3-none-any.whl", hash = "sha256:c3702b6d3dd8c7abc1afa565d7e63d53a1d0bd86cdc24edd75470f4de499cfcc"},
+    {file = "pycparser-2.22.tar.gz", hash = "sha256:491c8be9c040f5390f5bf44a5b07752bd07f56edf992381b05c701439eec10f6"},
 ]
 
 [[package]]
@@ -1569,6 +1904,8 @@ version = "2.7.4"
 description = "Data validation using Python type hints"
 optional = false
 python-versions = ">=3.8"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
     {file = "pydantic-2.7.4-py3-none-any.whl", hash = "sha256:ee8538d41ccb9c0a9ad3e0e5f07bf15ed8015b481ced539a1759d8cc89ae90d0"},
     {file = "pydantic-2.7.4.tar.gz", hash = "sha256:0c84efd9548d545f63ac0060c1e4d39bb9b14db8b3c0652338aecc07b5adec52"},
@@ -1588,6 +1925,8 @@ version = "2.18.4"
 description = "Core functionality for Pydantic validation and serialization"
 optional = false
 python-versions = ">=3.8"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
     {file = "pydantic_core-2.18.4-cp310-cp310-macosx_10_12_x86_64.whl", hash = "sha256:f76d0ad001edd426b92233d45c746fd08f467d56100fd8f30e9ace4b005266e4"},
     {file = "pydantic_core-2.18.4-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:59ff3e89f4eaf14050c8022011862df275b552caef8082e37b542b066ce1ff26"},
@@ -1675,13 +2014,15 @@ typing-extensions = ">=4.6.0,<4.7.0 || >4.7.0"
 
 [[package]]
 name = "pydantic-settings"
-version = "2.3.3"
+version = "2.7.1"
 description = "Settings management using Pydantic"
 optional = false
 python-versions = ">=3.8"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
-    {file = "pydantic_settings-2.3.3-py3-none-any.whl", hash = "sha256:e4ed62ad851670975ec11285141db888fd24947f9440bd4380d7d8788d4965de"},
-    {file = "pydantic_settings-2.3.3.tar.gz", hash = "sha256:87fda838b64b5039b970cd47c3e8a1ee460ce136278ff672980af21516f6e6ce"},
+    {file = "pydantic_settings-2.7.1-py3-none-any.whl", hash = "sha256:590be9e6e24d06db33a4262829edef682500ef008565a969c73d39d5f8bfb3fd"},
+    {file = "pydantic_settings-2.7.1.tar.gz", hash = "sha256:10c9caad35e64bfb3c2fbf70a078c0e25cc92499782e5200747f942a065dec93"},
 ]
 
 [package.dependencies]
@@ -1689,22 +2030,25 @@ pydantic = ">=2.7.0"
 python-dotenv = ">=0.21.0"
 
 [package.extras]
+azure-key-vault = ["azure-identity (>=1.16.0)", "azure-keyvault-secrets (>=4.8.0)"]
 toml = ["tomli (>=2.0.1)"]
 yaml = ["pyyaml (>=6.0.1)"]
 
 [[package]]
 name = "pygments"
-version = "2.16.1"
+version = "2.19.1"
 description = "Pygments is a syntax highlighting package written in Python."
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
-    {file = "Pygments-2.16.1-py3-none-any.whl", hash = "sha256:13fc09fa63bc8d8671a6d247e1eb303c4b343eaee81d861f3404db2935653692"},
-    {file = "Pygments-2.16.1.tar.gz", hash = "sha256:1daff0494820c69bc8941e407aa20f577374ee88364ee10a98fdbe0aece96e29"},
+    {file = "pygments-2.19.1-py3-none-any.whl", hash = "sha256:9ea1544ad55cecf4b8242fab6dd35a93bbce657034b0611ee383099054ab6d8c"},
+    {file = "pygments-2.19.1.tar.gz", hash = "sha256:61c16d2a8576dc0649d9f39e089b5f02bcd27fba10d8fb4dcc28173f7a45151f"},
 ]
 
 [package.extras]
-plugins = ["importlib-metadata"]
+windows-terminal = ["colorama (>=0.4.6)"]
 
 [[package]]
 name = "pymysql"
@@ -1712,6 +2056,8 @@ version = "1.1.1"
 description = "Pure Python MySQL Driver"
 optional = false
 python-versions = ">=3.7"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
     {file = "PyMySQL-1.1.1-py3-none-any.whl", hash = "sha256:4de15da4c61dc132f4fb9ab763063e693d521a80fd0e87943b9a453dd4c19d6c"},
     {file = "pymysql-1.1.1.tar.gz", hash = "sha256:e127611aaf2b417403c60bf4dc570124aeb4a57f5f37b8e95ae399a42f904cd0"},
@@ -1727,6 +2073,8 @@ version = "1.5.0"
 description = "Python binding to the Networking and Cryptography (NaCl) library"
 optional = false
 python-versions = ">=3.6"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
     {file = "PyNaCl-1.5.0-cp36-abi3-macosx_10_10_universal2.whl", hash = "sha256:401002a4aaa07c9414132aaed7f6836ff98f59277a234704ff66878c2ee4a0d1"},
     {file = "PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_aarch64.manylinux2014_aarch64.manylinux_2_24_aarch64.whl", hash = "sha256:52cb72a79269189d4e0dc537556f4740f7f0a9ec41c1322598799b0bdad4ef92"},
@@ -1749,24 +2097,31 @@ tests = ["hypothesis (>=3.27.0)", "pytest (>=3.2.1,!=3.3.0)"]
 
 [[package]]
 name = "pyreadline3"
-version = "3.4.1"
+version = "3.5.4"
 description = "A python implementation of GNU readline."
 optional = false
-python-versions = "*"
+python-versions = ">=3.8"
+groups = ["main"]
+markers = "sys_platform == \"win32\" and (python_version <= \"3.11\" or python_version >= \"3.12\")"
 files = [
-    {file = "pyreadline3-3.4.1-py3-none-any.whl", hash = "sha256:b0efb6516fd4fb07b45949053826a62fa4cb353db5be2bbb4a7aa1fdd1e345fb"},
-    {file = "pyreadline3-3.4.1.tar.gz", hash = "sha256:6f3d1f7b8a31ba32b73917cefc1f28cc660562f39aea8646d30bd6eff21f7bae"},
+    {file = "pyreadline3-3.5.4-py3-none-any.whl", hash = "sha256:eaf8e6cc3c49bcccf145fc6067ba8643d1df34d604a1ec0eccbf7a18e6d3fae6"},
+    {file = "pyreadline3-3.5.4.tar.gz", hash = "sha256:8d57d53039a1c75adba8e50dd3d992b28143480816187ea5efbd5c78e6c885b7"},
 ]
 
+[package.extras]
+dev = ["build", "flake8", "mypy", "pytest", "twine"]
+
 [[package]]
 name = "pytest"
-version = "7.4.2"
+version = "8.3.4"
 description = "pytest: simple powerful testing with Python"
-optional = false
-python-versions = ">=3.7"
+optional = true
+python-versions = ">=3.8"
+groups = ["main"]
+markers = "(extra == \"pytest-cov\" or extra == \"pytest-mock\" or extra == \"pytest\" or extra == \"pytest-xdist\") and (python_version <= \"3.11\" or python_version >= \"3.12\")"
 files = [
-    {file = "pytest-7.4.2-py3-none-any.whl", hash = "sha256:1d881c6124e08ff0a1bb75ba3ec0bfd8b5354a01c194ddd5a0a870a48d99b002"},
-    {file = "pytest-7.4.2.tar.gz", hash = "sha256:a766259cfab564a2ad52cb1aae1b881a75c3eb7e34ca3779697c23ed47c47069"},
+    {file = "pytest-8.3.4-py3-none-any.whl", hash = "sha256:50e16d954148559c9a74109af1eaf0c945ba2d8f30f0a3d3335edde19788b6f6"},
+    {file = "pytest-8.3.4.tar.gz", hash = "sha256:965370d062bce11e73868e0335abac31b4d3de0e82f4007408d242b4f8610761"},
 ]
 
 [package.dependencies]
@@ -1774,61 +2129,67 @@ colorama = {version = "*", markers = "sys_platform == \"win32\""}
 exceptiongroup = {version = ">=1.0.0rc8", markers = "python_version < \"3.11\""}
 iniconfig = "*"
 packaging = "*"
-pluggy = ">=0.12,<2.0"
-tomli = {version = ">=1.0.0", markers = "python_version < \"3.11\""}
+pluggy = ">=1.5,<2"
+tomli = {version = ">=1", markers = "python_version < \"3.11\""}
 
 [package.extras]
-testing = ["argcomplete", "attrs (>=19.2.0)", "hypothesis (>=3.56)", "mock", "nose", "pygments (>=2.7.2)", "requests", "setuptools", "xmlschema"]
+dev = ["argcomplete", "attrs (>=19.2)", "hypothesis (>=3.56)", "mock", "pygments (>=2.7.2)", "requests", "setuptools", "xmlschema"]
 
 [[package]]
 name = "pytest-cov"
-version = "4.1.0"
+version = "6.0.0"
 description = "Pytest plugin for measuring coverage."
-optional = false
-python-versions = ">=3.7"
+optional = true
+python-versions = ">=3.9"
+groups = ["main"]
+markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"pytest-cov\""
 files = [
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 [package.dependencies]
-coverage = {version = ">=5.2.1", extras = ["toml"]}
+coverage = {version = ">=7.5", extras = ["toml"]}
 pytest = ">=4.6"
 
 [package.extras]
-testing = ["fields", "hunter", "process-tests", "pytest-xdist", "six", "virtualenv"]
+testing = ["fields", "hunter", "process-tests", "pytest-xdist", "virtualenv"]
 
 [[package]]
 name = "pytest-mock"
-version = "3.11.1"
+version = "3.14.0"
 description = "Thin-wrapper around the mock package for easier use with pytest"
-optional = false
-python-versions = ">=3.7"
+optional = true
+python-versions = ">=3.8"
+groups = ["main"]
+markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"pytest-mock\""
 files = [
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 ]
 
 [package.dependencies]
-pytest = ">=5.0"
+pytest = ">=6.2.5"
 
 [package.extras]
 dev = ["pre-commit", "pytest-asyncio", "tox"]
 
 [[package]]
 name = "pytest-xdist"
-version = "3.5.0"
+version = "3.6.1"
 description = "pytest xdist plugin for distributed testing, most importantly across multiple CPUs"
-optional = false
-python-versions = ">=3.7"
+optional = true
+python-versions = ">=3.8"
+groups = ["main"]
+markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"pytest-xdist\""
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 ]
 
 [package.dependencies]
-execnet = ">=1.1"
-pytest = ">=6.2.0"
+execnet = ">=2.1"
+pytest = ">=7.0.0"
 
 [package.extras]
 psutil = ["psutil (>=3.0)"]
@@ -1837,13 +2198,15 @@ testing = ["filelock"]
 
 [[package]]
 name = "python-dateutil"
-version = "2.8.2"
+version = "2.9.0.post0"
 description = "Extensions to the standard Python datetime module"
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,>=2.7"
+groups = ["main"]
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 files = [
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 ]
 
 [package.dependencies]
@@ -1855,6 +2218,8 @@ version = "1.0.1"
 description = "Read key-value pairs from a .env file and set them as environment variables"
 optional = false
 python-versions = ">=3.8"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
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@@ -1865,84 +2230,92 @@ cli = ["click (>=5.0)"]
 
 [[package]]
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-version = "2023.3.post1"
+version = "2024.2"
 description = "World timezone definitions, modern and historical"
 optional = false
 python-versions = "*"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
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 ]
 
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 [[package]]
 name = "requests"
-version = "2.32.2"
+version = "2.32.3"
 description = "Python HTTP for Humans."
 optional = false
 python-versions = ">=3.8"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
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 ]
 
 [package.dependencies]
@@ -1957,13 +2330,15 @@ use-chardet-on-py3 = ["chardet (>=3.0.2,<6)"]
 
 [[package]]
 name = "requests-oauthlib"
-version = "1.3.1"
+version = "2.0.0"
 description = "OAuthlib authentication support for Requests."
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
+python-versions = ">=3.4"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
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 ]
 
 [package.dependencies]
@@ -1975,41 +2350,46 @@ rsa = ["oauthlib[signedtoken] (>=3.0.0)"]
 
 [[package]]
 name = "rich"
-version = "13.6.0"
+version = "13.9.4"
 description = "Render rich text, tables, progress bars, syntax highlighting, markdown and more to the terminal"
 optional = false
-python-versions = ">=3.7.0"
+python-versions = ">=3.8.0"
+groups = ["main"]
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 files = [
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 ]
 
 [package.dependencies]
 markdown-it-py = ">=2.2.0"
 pygments = ">=2.13.0,<3.0.0"
+typing-extensions = {version = ">=4.0.0,<5.0", markers = "python_version < \"3.11\""}
 
 [package.extras]
 jupyter = ["ipywidgets (>=7.5.1,<9)"]
 
 [[package]]
 name = "rich-click"
-version = "1.8.4"
+version = "1.8.5"
 description = "Format click help output nicely with rich"
 optional = false
 python-versions = ">=3.7"
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 ]
 
 [package.dependencies]
 click = ">=7"
 rich = ">=10.7"
-typing-extensions = ">=4"
+typing_extensions = ">=4"
 
 [package.extras]
 dev = ["mypy", "packaging", "pre-commit", "pytest", "pytest-cov", "rich-codex", "ruff", "types-setuptools"]
-docs = ["markdown-include", "mkdocs", "mkdocs-glightbox", "mkdocs-material-extensions", "mkdocs-material[imaging] (>=9.5.18,<9.6.0)", "mkdocs-rss-plugin", "mkdocstrings[python]", "rich-codex"]
+docs = ["markdown_include", "mkdocs", "mkdocs-glightbox", "mkdocs-material-extensions", "mkdocs-material[imaging] (>=9.5.18,<9.6.0)", "mkdocs-rss-plugin", "mkdocstrings[python]", "rich-codex"]
 
 [[package]]
 name = "rsa"
@@ -2017,6 +2397,8 @@ version = "4.9"
 description = "Pure-Python RSA implementation"
 optional = false
 python-versions = ">=3.6,<4"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
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@@ -2027,131 +2409,132 @@ pyasn1 = ">=0.1.3"
 
 [[package]]
 name = "ruff"
-version = "0.0.292"
-description = "An extremely fast Python linter, written in Rust."
-optional = false
+version = "0.9.1"
+description = "An extremely fast Python linter and code formatter, written in Rust."
+optional = true
 python-versions = ">=3.7"
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+typing-extensions = ">=4.6.0"
 
 [package.extras]
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-aiosqlite = ["aiosqlite", "greenlet (!=0.4.17)", "typing-extensions (!=3.10.0.1)"]
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 asyncio = ["greenlet (!=0.4.17)"]
 asyncmy = ["asyncmy (>=0.2.3,!=0.2.4,!=0.2.6)", "greenlet (!=0.4.17)"]
-mariadb-connector = ["mariadb (>=1.0.1,!=1.1.2,!=1.1.5)"]
+mariadb-connector = ["mariadb (>=1.0.1,!=1.1.2,!=1.1.5,!=1.1.10)"]
 mssql = ["pyodbc"]
 mssql-pymssql = ["pymssql"]
 mssql-pyodbc = ["pyodbc"]
 mypy = ["mypy (>=0.910)"]
 mysql = ["mysqlclient (>=1.4.0)"]
 mysql-connector = ["mysql-connector-python"]
-oracle = ["cx-oracle (>=7)"]
+oracle = ["cx_oracle (>=8)"]
 oracle-oracledb = ["oracledb (>=1.0.1)"]
 postgresql = ["psycopg2 (>=2.7)"]
 postgresql-asyncpg = ["asyncpg", "greenlet (!=0.4.17)"]
@@ -2161,7 +2544,7 @@ postgresql-psycopg2binary = ["psycopg2-binary"]
 postgresql-psycopg2cffi = ["psycopg2cffi"]
 postgresql-psycopgbinary = ["psycopg[binary] (>=3.0.7)"]
 pymysql = ["pymysql"]
-sqlcipher = ["sqlcipher3-binary"]
+sqlcipher = ["sqlcipher3_binary"]
 
 [[package]]
 name = "tabulate"
@@ -2169,6 +2552,8 @@ version = "0.9.0"
 description = "Pretty-print tabular data"
 optional = false
 python-versions = ">=3.7"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
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@@ -2179,46 +2564,84 @@ widechars = ["wcwidth"]
 
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 name = "tzdata"
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 python-versions = ">=2"
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-    {file = "tzdata-2023.3.tar.gz", hash = "sha256:11ef1e08e54acb0d4f95bdb1be05da659673de4acbd21bf9c69e94cc5e907a3a"},
+    {file = "tzdata-2024.2-py2.py3-none-any.whl", hash = "sha256:a48093786cdcde33cad18c2555e8532f34422074448fbc874186f0abd79565cd"},
+    {file = "tzdata-2024.2.tar.gz", hash = "sha256:7d85cc416e9382e69095b7bdf4afd9e3880418a2413feec7069d533d6b4e31cc"},
 ]
 
 [[package]]
 name = "urllib3"
-version = "2.2.2"
+version = "2.3.0"
 description = "HTTP library with thread-safe connection pooling, file post, and more."
 optional = false
-python-versions = ">=3.8"
+python-versions = ">=3.9"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
-    {file = "urllib3-2.2.2-py3-none-any.whl", hash = "sha256:a448b2f64d686155468037e1ace9f2d2199776e17f0a46610480d311f73e3472"},
-    {file = "urllib3-2.2.2.tar.gz", hash = "sha256:dd505485549a7a552833da5e6063639d0d177c04f23bc3864e41e5dc5f612168"},
+    {file = "urllib3-2.3.0-py3-none-any.whl", hash = "sha256:1cee9ad369867bfdbbb48b7dd50374c0967a0bb7710050facf0dd6911440e3df"},
+    {file = "urllib3-2.3.0.tar.gz", hash = "sha256:f8c5449b3cf0861679ce7e0503c7b44b5ec981bec0d1d3795a07f1ba96f0204d"},
 ]
 
 [package.extras]
@@ -2233,6 +2656,8 @@ version = "2.4.3"
 description = "A utility class for manipulating URLs."
 optional = false
 python-versions = "*"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
     {file = "URLObject-2.4.3.tar.gz", hash = "sha256:47b2e20e6ab9c8366b2f4a3566b6ff4053025dad311c4bb71279bbcfa2430caa"},
 ]
@@ -2241,8 +2666,10 @@ files = [
 name = "virtualenv"
 version = "20.28.1"
 description = "Virtual Python Environment builder"
-optional = false
+optional = true
 python-versions = ">=3.8"
+groups = ["main"]
+markers = "(python_version <= \"3.11\" or python_version >= \"3.12\") and extra == \"pre-commit\""
 files = [
     {file = "virtualenv-20.28.1-py3-none-any.whl", hash = "sha256:412773c85d4dab0409b83ec36f7a6499e72eaf08c80e81e9576bca61831c71cb"},
     {file = "virtualenv-20.28.1.tar.gz", hash = "sha256:5d34ab240fdb5d21549b76f9e8ff3af28252f5499fb6d6f031adac4e5a8c5329"},
@@ -2263,6 +2690,8 @@ version = "3.1.3"
 description = "The comprehensive WSGI web application library."
 optional = false
 python-versions = ">=3.9"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
     {file = "werkzeug-3.1.3-py3-none-any.whl", hash = "sha256:54b78bf3716d19a65be4fceccc0d1d7b89e608834989dfae50ea87564639213e"},
     {file = "werkzeug-3.1.3.tar.gz", hash = "sha256:60723ce945c19328679790e3282cc758aa4a6040e4bb330f53d30fa546d44746"},
@@ -2276,37 +2705,55 @@ watchdog = ["watchdog (>=2.3)"]
 
 [[package]]
 name = "wtforms"
-version = "3.0.0"
+version = "3.2.1"
 description = "Form validation and rendering for Python web development."
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.9"
+groups = ["main"]
+markers = "python_version <= \"3.11\" or python_version >= \"3.12\""
 files = [
-    {file = "WTForms-3.0.0-py3-none-any.whl", hash = "sha256:232dbb0094847dca2f45c72136b5ca1d5dca2a3e24ccd2229823b8b74b3c6698"},
-    {file = "WTForms-3.0.0.tar.gz", hash = "sha256:4abfbaa1d529a1d0ac927d44af8dbb9833afd910e56448a103f1893b0b176886"},
+    {file = "wtforms-3.2.1-py3-none-any.whl", hash = "sha256:583bad77ba1dd7286463f21e11aa3043ca4869d03575921d1a1698d0715e0fd4"},
+    {file = "wtforms-3.2.1.tar.gz", hash = "sha256:df3e6b70f3192e92623128123ec8dca3067df9cfadd43d59681e210cfb8d4682"},
 ]
 
 [package.dependencies]
-MarkupSafe = "*"
+markupsafe = "*"
 
 [package.extras]
 email = ["email-validator"]
 
 [[package]]
 name = "zipp"
-version = "3.19.2"
+version = "3.21.0"
 description = "Backport of pathlib-compatible object wrapper for zip files"
 optional = false
-python-versions = ">=3.8"
+python-versions = ">=3.9"
+groups = ["main"]
+markers = "python_version < \"3.10\""
 files = [
-    {file = "zipp-3.19.2-py3-none-any.whl", hash = "sha256:f091755f667055f2d02b32c53771a7a6c8b47e1fdbc4b72a8b9072b3eef8015c"},
-    {file = "zipp-3.19.2.tar.gz", hash = "sha256:bf1dcf6450f873a13e952a29504887c89e6de7506209e5b1bcc3460135d4de19"},
+    {file = "zipp-3.21.0-py3-none-any.whl", hash = "sha256:ac1bbe05fd2991f160ebce24ffbac5f6d11d83dc90891255885223d42b3cd931"},
+    {file = "zipp-3.21.0.tar.gz", hash = "sha256:2c9958f6430a2040341a52eb608ed6dd93ef4392e02ffe219417c1b28b5dd1f4"},
 ]
 
 [package.extras]
+check = ["pytest-checkdocs (>=2.4)", "pytest-ruff (>=0.2.1)"]
+cover = ["pytest-cov"]
 doc = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
-test = ["big-O", "importlib-resources", "jaraco.functools", "jaraco.itertools", "jaraco.test", "more-itertools", "pytest (>=6,!=8.1.*)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-ignore-flaky", "pytest-mypy", "pytest-ruff (>=0.2.1)"]
+enabler = ["pytest-enabler (>=2.2)"]
+test = ["big-O", "importlib-resources", "jaraco.functools", "jaraco.itertools", "jaraco.test", "more-itertools", "pytest (>=6,!=8.1.*)", "pytest-ignore-flaky"]
+type = ["pytest-mypy"]
+
+[extras]
+coveralls = ["coveralls"]
+mock = ["mock"]
+pre-commit = ["pre-commit"]
+pytest = ["pytest"]
+pytest-cov = ["pytest-cov"]
+pytest-mock = ["pytest-mock"]
+pytest-xdist = ["pytest-xdist"]
+ruff = ["ruff"]
 
 [metadata]
-lock-version = "2.0"
+lock-version = "2.1"
 python-versions = ">=3.9,<3.13"
-content-hash = "3b7bcec9c2a1a49b6a5a0f7cc3018d1f63bccff0d8fdf6cac6f139876933dc1b"
+content-hash = "b63b203bf74a57a9f56333ace8f34758f7f9c1bca64b5241868154b22b3317f0"
diff --git a/pyproject.toml b/pyproject.toml
index 3981f64298..0b182bbdfd 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -2,12 +2,11 @@
 requires = ["poetry-core>=1.0.0"]
 build-backend = "poetry.core.masonry.api"
 
-[tool.poetry]
+[project]
 name = "cg"
 version = "65.0.16"
 description = "Clinical Genomics command center"
-authors = ["Clinical Genomics <support@clinicalgenomics.se>"]
-readme = "README.md"
+readme = {file = "README.md", content-type = "text/markdown"}
 homepage = "https://github.com/Clinical-Genomics/cg"
 repository = "https://github.com/Clinical-Genomics/cg"
 classifiers = [
@@ -20,72 +19,62 @@ include = [
   "cg/**/*",
   "tests/**/*"
 ]
+requires-python = ">=3.9,<3.13"
+dependencies = [
+"alembic",
+"SQLAlchemy",
+"PyMySQL",
+"click",
+"blinker",
+"CacheControl",
+"Flask-Admin",
+"Flask-CORS",
+"Flask-Dance",
+"Flask",
+"Flask-WTF",
+"WTForms",
+"google-auth",
+"gunicorn",
+"requests",
+"werkzeug",
+"cachetools",
+"cryptography",
+"coloredlogs",
+"Jinja2",
+"lxml",
+"marshmallow",
+"MarkupSafe",
+"openpyxl",
+"packaging",
+"pandas",
+"paramiko",
+"petname",
+"psutil",
+"pydantic == 2.7.4",
+"python-dateutil",
+"PyYAML",
+"tabulate",
+"typing_extensions",
+"urllib3",
+"genologics",
+"housekeeper>=4.11.3",
+"pydantic-settings>=2.3.3",
+"email-validator>=2.2.0",
+"rich-click>=1.8.4",
+  ]
+[project.optional-dependencies]
+coveralls = ["coveralls"]
+mock = ["mock"]
+pre-commit = ["pre-commit"]
+pytest-cov = ["pytest-cov"]
+pytest-mock = ["pytest-mock"]
+pytest = ["pytest"]
+ruff = ["ruff"]
+pytest-xdist = ["pytest-xdist"]
 
-[tool.poetry.dependencies]
-python = ">=3.9,<3.13"
 
-# Database
-alembic = "*"
-SQLAlchemy = "*"
-PyMySQL = "*"
 
-# CLI
-click = "*"
-
-# Server
-blinker = "*"
-CacheControl = "*"
-Flask-Admin = "*"
-Flask-CORS = "*"
-Flask-Dance = "*"
-Flask = "*"
-Flask-WTF = "*"
-WTForms = "*"
-google-auth = "*"
-gunicorn = "*"
-requests = "*"
-werkzeug = "*"
-
-# Utils
-cachetools = "*"
-cryptography = "*"
-coloredlogs = "*"
-Jinja2 = ">=3.1.3"
-lxml = "*"
-marshmallow = "*"
-MarkupSafe = "*"
-openpyxl = "*"
-packaging = "*"
-pandas = "*"
-paramiko = "*"
-petname = "*"
-psutil = "*"
-pydantic = "*"
-python-dateutil = "*"
-PyYAML = "*"
-tabulate = "*"
-typing_extensions = "*"
-urllib3 = "*"
-
-# Apps
-genologics = "*"
-housekeeper = ">=4.11.3"
-pydantic-settings = "^2.3.3"
-email-validator = "^2.2.0"
-rich-click = "^1.8.4"
-
-
-[tool.poetry.dev-dependencies]
-coveralls = "*"
-mock = "*"
-pre-commit = "*"
-pytest-cov = "*"
-pytest-mock = "*"
-pytest = "*"
-ruff = "*"
-pytest-xdist = "*"
-
-[tool.poetry.scripts]
+[project.scripts]
 cg = "cg.cli.base:base"
 
 
diff --git a/tests/cli/store/test_store.py b/tests/cli/store/test_store.py
index 707232b559..1b4ca4c5c6 100644
--- a/tests/cli/store/test_store.py
+++ b/tests/cli/store/test_store.py
@@ -133,9 +133,10 @@ def test_store_flow_cell(
     assert sample
 
     # GIVEN samples objects on a flow cell
-    with mocker.patch.object(
-        Store, "get_samples_by_illumina_flow_cell", return_value=[sample]
-    ), mocker.patch.object(CompressAPI, "add_decompressed_fastq", return_value=True):
+    with (
+        mocker.patch.object(Store, "get_samples_by_illumina_flow_cell", return_value=[sample]),
+        mocker.patch.object(CompressAPI, "add_decompressed_fastq", return_value=True),
+    ):
         # WHEN running the store flow cell command
         res = cli_runner.invoke(
             store_illumina_run,
diff --git a/tests/meta/archive/test_archive_api.py b/tests/meta/archive/test_archive_api.py
index d33bde3e5d..61df598cc9 100644
--- a/tests/meta/archive/test_archive_api.py
+++ b/tests/meta/archive/test_archive_api.py
@@ -134,15 +134,18 @@ def test_call_corresponding_archiving_method(
         sample=spring_archive_api.status_db.get_sample_by_internal_id(sample_id),
     )
 
-    with mock.patch.object(
-        DDNDataFlowClient,
-        "_set_auth_tokens",
-        return_value=123,
-    ), mock.patch.object(
-        DDNDataFlowClient,
-        "archive_file",
-        return_value=123,
-    ) as mock_request_submitter:
+    with (
+        mock.patch.object(
+            DDNDataFlowClient,
+            "_set_auth_tokens",
+            return_value=123,
+        ),
+        mock.patch.object(
+            DDNDataFlowClient,
+            "archive_file",
+            return_value=123,
+        ) as mock_request_submitter,
+    ):
         # WHEN calling the corresponding archive method
         spring_archive_api.archive_file_to_location(
             file_and_sample=file_and_sample, archive_handler=ddn_dataflow_client
@@ -168,15 +171,18 @@ def test_archive_all_non_archived_spring_files(
     # with the DDN customer having two samples, and the non-DDN having one sample.
 
     # WHEN archiving all available files
-    with mock.patch.object(
-        AuthToken,
-        "model_validate",
-        return_value=test_auth_token,
-    ), mock.patch.object(
-        APIRequest,
-        "api_request_from_content",
-        return_value=ok_miria_response,
-    ) as mock_request_submitter:
+    with (
+        mock.patch.object(
+            AuthToken,
+            "model_validate",
+            return_value=test_auth_token,
+        ),
+        mock.patch.object(
+            APIRequest,
+            "api_request_from_content",
+            return_value=ok_miria_response,
+        ) as mock_request_submitter,
+    ):
         spring_archive_api.archive_spring_files_and_add_archives_to_housekeeper(
             spring_file_count_limit=limit
         )
@@ -233,18 +239,22 @@ def test_get_archival_status(
     spring_archive_api.housekeeper_api.add_archives(files=[file], archive_task_id=archival_job_id)
 
     # WHEN querying the task id and getting a "COMPLETED" response
-    with mock.patch.object(
-        AuthToken,
-        "model_validate",
-        return_value=test_auth_token,
-    ), mock.patch.object(
-        APIRequest,
-        "api_request_from_content",
-        return_value=ok_miria_job_status_response,
-    ), mock.patch.object(
-        DDNDataFlowClient,
-        "_get_job_status",
-        return_value=GetJobStatusResponse(id=archival_job_id, status=job_status),
+    with (
+        mock.patch.object(
+            AuthToken,
+            "model_validate",
+            return_value=test_auth_token,
+        ),
+        mock.patch.object(
+            APIRequest,
+            "api_request_from_content",
+            return_value=ok_miria_job_status_response,
+        ),
+        mock.patch.object(
+            DDNDataFlowClient,
+            "_get_job_status",
+            return_value=GetJobStatusResponse(id=archival_job_id, status=job_status),
+        ),
     ):
         spring_archive_api.update_ongoing_task(
             task_id=archival_job_id,
@@ -291,18 +301,22 @@ def test_get_retrieval_status(
     )
 
     # WHEN querying the task id
-    with mock.patch.object(
-        AuthToken,
-        "model_validate",
-        return_value=test_auth_token,
-    ), mock.patch.object(
-        APIRequest,
-        "api_request_from_content",
-        return_value=ok_miria_job_status_response,
-    ), mock.patch.object(
-        DDNDataFlowClient,
-        "_get_job_status",
-        return_value=GetJobStatusResponse(id=retrieval_job_id, status=job_status),
+    with (
+        mock.patch.object(
+            AuthToken,
+            "model_validate",
+            return_value=test_auth_token,
+        ),
+        mock.patch.object(
+            APIRequest,
+            "api_request_from_content",
+            return_value=ok_miria_job_status_response,
+        ),
+        mock.patch.object(
+            DDNDataFlowClient,
+            "_get_job_status",
+            return_value=GetJobStatusResponse(id=retrieval_job_id, status=job_status),
+        ),
     ):
         spring_archive_api.update_ongoing_task(
             task_id=retrieval_job_id,
@@ -345,15 +359,18 @@ def test_retrieve_case(
     sample: Sample = spring_archive_api.status_db.get_sample_by_internal_id(sample_with_spring_file)
 
     # WHEN archiving all available files
-    with mock.patch.object(
-        AuthToken,
-        "model_validate",
-        return_value=test_auth_token,
-    ), mock.patch.object(
-        APIRequest,
-        "api_request_from_content",
-        return_value=ok_miria_response,
-    ) as mock_request_submitter:
+    with (
+        mock.patch.object(
+            AuthToken,
+            "model_validate",
+            return_value=test_auth_token,
+        ),
+        mock.patch.object(
+            APIRequest,
+            "api_request_from_content",
+            return_value=ok_miria_response,
+        ) as mock_request_submitter,
+    ):
         spring_archive_api.retrieve_spring_files_for_case(sample.links[0].case.internal_id)
 
     retrieve_request_json["pathInfo"][0]["source"] += "/" + Path(files[0].path).name
@@ -400,15 +417,18 @@ def test_retrieve_sample(
         assert file.archive
 
     # WHEN archiving all available files
-    with mock.patch.object(
-        AuthToken,
-        "model_validate",
-        return_value=test_auth_token,
-    ), mock.patch.object(
-        APIRequest,
-        "api_request_from_content",
-        return_value=ok_miria_response,
-    ) as mock_request_submitter:
+    with (
+        mock.patch.object(
+            AuthToken,
+            "model_validate",
+            return_value=test_auth_token,
+        ),
+        mock.patch.object(
+            APIRequest,
+            "api_request_from_content",
+            return_value=ok_miria_response,
+        ) as mock_request_submitter,
+    ):
         spring_archive_api.retrieve_spring_files_for_sample(sample_with_spring_file)
 
     retrieve_request_json["pathInfo"][0]["source"] += "/" + Path(files[0].path).name
@@ -457,15 +477,18 @@ def test_retrieve_order(
     sample: Sample = spring_archive_api.status_db.get_sample_by_internal_id(sample_with_spring_file)
 
     # WHEN archiving all available files
-    with mock.patch.object(
-        AuthToken,
-        "model_validate",
-        return_value=test_auth_token,
-    ), mock.patch.object(
-        APIRequest,
-        "api_request_from_content",
-        return_value=ok_miria_response,
-    ) as mock_request_submitter:
+    with (
+        mock.patch.object(
+            AuthToken,
+            "model_validate",
+            return_value=test_auth_token,
+        ),
+        mock.patch.object(
+            APIRequest,
+            "api_request_from_content",
+            return_value=ok_miria_response,
+        ) as mock_request_submitter,
+    ):
         spring_archive_api.retrieve_spring_files_for_order(
             id_=sample.original_ticket, is_order_id=False
         )
@@ -509,16 +532,18 @@ def test_delete_file_raises_http_error(
     )
 
     # GIVEN that the request returns a failed response
-    with mock.patch.object(
-        DDNDataFlowClient,
-        "_get_auth_token",
-        return_value=test_auth_token,
-    ), mock.patch.object(
-        APIRequest,
-        "api_request_from_content",
-        return_value=failed_delete_file_response,
-    ), pytest.raises(
-        HTTPError
+    with (
+        mock.patch.object(
+            DDNDataFlowClient,
+            "_get_auth_token",
+            return_value=test_auth_token,
+        ),
+        mock.patch.object(
+            APIRequest,
+            "api_request_from_content",
+            return_value=failed_delete_file_response,
+        ),
+        pytest.raises(HTTPError),
     ):
         # WHEN trying to delete the file via Miria and in Housekeeper
 
@@ -551,14 +576,17 @@ def test_delete_file_success(
     )
 
     # GIVEN that the delete request returns a successful response
-    with mock.patch.object(
-        DDNDataFlowClient,
-        "_get_auth_token",
-        return_value=test_auth_token,
-    ), mock.patch.object(
-        APIRequest,
-        "api_request_from_content",
-        return_value=ok_delete_file_response,
+    with (
+        mock.patch.object(
+            DDNDataFlowClient,
+            "_get_auth_token",
+            return_value=test_auth_token,
+        ),
+        mock.patch.object(
+            APIRequest,
+            "api_request_from_content",
+            return_value=ok_delete_file_response,
+        ),
     ):
         # WHEN trying to delete the file via Miria and in Housekeeper
 
diff --git a/tests/meta/archive/test_archive_cli.py b/tests/meta/archive/test_archive_cli.py
index 6a7cfa08a2..876f9d83bb 100644
--- a/tests/meta/archive/test_archive_cli.py
+++ b/tests/meta/archive/test_archive_cli.py
@@ -10,11 +10,7 @@
 from cg.constants import EXIT_SUCCESS, SequencingFileTag
 from cg.constants.archiving import ArchiveLocations
 from cg.io.controller import APIRequest
-from cg.meta.archive.ddn.constants import (
-    FAILED_JOB_STATUSES,
-    ONGOING_JOB_STATUSES,
-    JobStatus,
-)
+from cg.meta.archive.ddn.constants import FAILED_JOB_STATUSES, ONGOING_JOB_STATUSES, JobStatus
 from cg.meta.archive.ddn.ddn_data_flow_client import DDNDataFlowClient
 from cg.meta.archive.ddn.models import ArchivalResponse, AuthToken, GetJobStatusResponse
 from cg.models.cg_config import CGConfig
@@ -61,16 +57,20 @@ def test_archive_spring_files_success(
     spring_file: File = all_non_archived_spring_files[0]
 
     # WHEN running 'cg archive archive-spring-files'
-    with mock.patch.object(
-        AuthToken,
-        "model_validate",
-        return_value=test_auth_token,
-    ), mock.patch.object(
-        APIRequest,
-        "api_request_from_content",
-        return_value=ok_miria_response,
-    ), mock.patch.object(
-        DDNDataFlowClient, "_archive_file", return_value=ArchivalResponse(jobId=archival_job_id)
+    with (
+        mock.patch.object(
+            AuthToken,
+            "model_validate",
+            return_value=test_auth_token,
+        ),
+        mock.patch.object(
+            APIRequest,
+            "api_request_from_content",
+            return_value=ok_miria_response,
+        ),
+        mock.patch.object(
+            DDNDataFlowClient, "_archive_file", return_value=ArchivalResponse(jobId=archival_job_id)
+        ),
     ):
         result = cli_runner.invoke(
             archive_spring_files,
@@ -105,18 +105,22 @@ def test_get_archival_job_status(
     assert not archive_context.housekeeper_api.get_archive_entries()[0].archived_at
 
     # WHEN invoking update_job_statuses
-    with mock.patch.object(
-        AuthToken,
-        "model_validate",
-        return_value=test_auth_token,
-    ), mock.patch.object(
-        APIRequest,
-        "api_request_from_content",
-        return_value=ok_miria_response,
-    ), mock.patch.object(
-        DDNDataFlowClient,
-        "_get_job_status",
-        return_value=GetJobStatusResponse(id=archival_job_id, status=job_status),
+    with (
+        mock.patch.object(
+            AuthToken,
+            "model_validate",
+            return_value=test_auth_token,
+        ),
+        mock.patch.object(
+            APIRequest,
+            "api_request_from_content",
+            return_value=ok_miria_response,
+        ),
+        mock.patch.object(
+            DDNDataFlowClient,
+            "_get_job_status",
+            return_value=GetJobStatusResponse(id=archival_job_id, status=job_status),
+        ),
     ):
         result = cli_runner.invoke(
             update_job_statuses,
@@ -162,18 +166,22 @@ def test_get_retrieval_job_status(
     retrieving_archive.retrieval_task_id = retrieval_job_id
 
     # WHEN invoking update_job_statuses
-    with mock.patch.object(
-        AuthToken,
-        "model_validate",
-        return_value=test_auth_token,
-    ), mock.patch.object(
-        APIRequest,
-        "api_request_from_content",
-        return_value=ok_miria_response,
-    ), mock.patch.object(
-        DDNDataFlowClient,
-        "_get_job_status",
-        return_value=GetJobStatusResponse(id=retrieval_job_id, status=job_status),
+    with (
+        mock.patch.object(
+            AuthToken,
+            "model_validate",
+            return_value=test_auth_token,
+        ),
+        mock.patch.object(
+            APIRequest,
+            "api_request_from_content",
+            return_value=ok_miria_response,
+        ),
+        mock.patch.object(
+            DDNDataFlowClient,
+            "_get_job_status",
+            return_value=GetJobStatusResponse(id=retrieval_job_id, status=job_status),
+        ),
     ):
         result = cli_runner.invoke(
             update_job_statuses,
@@ -220,16 +228,18 @@ def test_delete_file_raises_http_error(
     )
 
     # GIVEN that the request returns a failed response
-    with mock.patch.object(
-        DDNDataFlowClient,
-        "_get_auth_token",
-        return_value=test_auth_token,
-    ), mock.patch.object(
-        APIRequest,
-        "api_request_from_content",
-        return_value=failed_delete_file_response,
-    ), pytest.raises(
-        HTTPError
+    with (
+        mock.patch.object(
+            DDNDataFlowClient,
+            "_get_auth_token",
+            return_value=test_auth_token,
+        ),
+        mock.patch.object(
+            APIRequest,
+            "api_request_from_content",
+            return_value=failed_delete_file_response,
+        ),
+        pytest.raises(HTTPError),
     ):
         # WHEN trying to delete the file via Miria and in Housekeeper
 
@@ -265,14 +275,17 @@ def test_delete_file_success(
     )
 
     # GIVEN that the delete request returns a successful response
-    with mock.patch.object(
-        DDNDataFlowClient,
-        "_get_auth_token",
-        return_value=test_auth_token,
-    ), mock.patch.object(
-        APIRequest,
-        "api_request_from_content",
-        return_value=ok_delete_file_response,
+    with (
+        mock.patch.object(
+            DDNDataFlowClient,
+            "_get_auth_token",
+            return_value=test_auth_token,
+        ),
+        mock.patch.object(
+            APIRequest,
+            "api_request_from_content",
+            return_value=ok_delete_file_response,
+        ),
     ):
         # WHEN trying to delete the file via Miria and in Housekeeper
 
diff --git a/tests/meta/orders/test_meta_orders_api.py b/tests/meta/orders/test_meta_orders_api.py
index 6844697337..2f1a9317f6 100644
--- a/tests/meta/orders/test_meta_orders_api.py
+++ b/tests/meta/orders/test_meta_orders_api.py
@@ -11,10 +11,8 @@
 from cg.meta.orders import OrdersAPI
 from cg.models.orders.order import OrderIn, OrderType
 from cg.models.orders.samples import MipDnaSample
-from cg.services.orders.validate_order_services.validate_case_order import (
-    ValidateCaseOrderService,
-)
-from cg.store.models import Case, Customer, Pool, Sample, Order
+from cg.services.orders.validate_order_services.validate_case_order import ValidateCaseOrderService
+from cg.store.models import Case, Customer, Order, Pool, Sample
 from cg.store.store import Store
 from tests.store_helpers import StoreHelpers
 
@@ -80,11 +78,14 @@ def test_submit(
     user_mail: str,
     user_name: str,
 ):
-    with patch(
-        "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.create_ticket"
-    ) as mock_create_ticket, patch(
-        "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.reply_to_ticket"
-    ) as mock_reply_to_ticket:
+    with (
+        patch(
+            "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.create_ticket"
+        ) as mock_create_ticket,
+        patch(
+            "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.reply_to_ticket"
+        ) as mock_reply_to_ticket,
+    ):
         mock_freshdesk_ticket_creation(mock_create_ticket, ticket_id)
         mock_freshdesk_reply_to_ticket(mock_reply_to_ticket)
 
@@ -199,11 +200,14 @@ def test_submit_scout_legal_sample_customer(
     user_name: str,
     ticket_id: str,
 ):
-    with patch(
-        "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.create_ticket"
-    ) as mock_create_ticket, patch(
-        "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.reply_to_ticket"
-    ) as mock_reply_to_ticket:
+    with (
+        patch(
+            "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.create_ticket"
+        ) as mock_create_ticket,
+        patch(
+            "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.reply_to_ticket"
+        ) as mock_reply_to_ticket,
+    ):
         mock_freshdesk_ticket_creation(mock_create_ticket, ticket_id)
         mock_freshdesk_reply_to_ticket(mock_reply_to_ticket)
         order_data = OrderIn.parse_obj(obj=all_orders_to_submit[order_type], project=order_type)
@@ -303,11 +307,14 @@ def test_submit_fluffy_duplicate_sample_case_name(
     user_name: str,
     ticket_id: str,
 ):
-    with patch(
-        "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.create_ticket"
-    ) as mock_create_ticket, patch(
-        "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.reply_to_ticket"
-    ) as mock_reply_to_ticket:
+    with (
+        patch(
+            "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.create_ticket"
+        ) as mock_create_ticket,
+        patch(
+            "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.reply_to_ticket"
+        ) as mock_reply_to_ticket,
+    ):
         mock_freshdesk_ticket_creation(mock_create_ticket, ticket_id)
         mock_freshdesk_reply_to_ticket(mock_reply_to_ticket)
         # GIVEN we have an order with a case that is already in the database
@@ -337,11 +344,14 @@ def test_submit_unique_sample_case_name(
     monkeypatch: pytest.MonkeyPatch,
     ticket_id: str,
 ):
-    with patch(
-        "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.create_ticket"
-    ) as mock_create_ticket, patch(
-        "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.reply_to_ticket"
-    ) as mock_reply_to_ticket:
+    with (
+        patch(
+            "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.create_ticket"
+        ) as mock_create_ticket,
+        patch(
+            "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.reply_to_ticket"
+        ) as mock_reply_to_ticket,
+    ):
         mock_freshdesk_ticket_creation(mock_create_ticket, ticket_id)
         mock_freshdesk_reply_to_ticket(mock_reply_to_ticket)
 
@@ -518,11 +528,14 @@ def test_submit_unique_sample_name(
     user_name: str,
     ticket_id: str,
 ):
-    with patch(
-        "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.create_ticket"
-    ) as mock_create_ticket, patch(
-        "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.reply_to_ticket"
-    ) as mock_reply_to_ticket:
+    with (
+        patch(
+            "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.create_ticket"
+        ) as mock_create_ticket,
+        patch(
+            "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.reply_to_ticket"
+        ) as mock_reply_to_ticket,
+    ):
         mock_freshdesk_ticket_creation(mock_create_ticket, ticket_id)
         mock_freshdesk_reply_to_ticket(mock_reply_to_ticket)
         # GIVEN we have an order with a sample that is not existing in the database
@@ -604,11 +617,14 @@ def test_not_sarscov2_submit_duplicate_sample_name(
     user_name: str,
     ticket_id: str,
 ):
-    with patch(
-        "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.create_ticket"
-    ) as mock_create_ticket, patch(
-        "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.reply_to_ticket"
-    ) as mock_reply_to_ticket:
+    with (
+        patch(
+            "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.create_ticket"
+        ) as mock_create_ticket,
+        patch(
+            "cg.clients.freshdesk.freshdesk_client.FreshdeskClient.reply_to_ticket"
+        ) as mock_reply_to_ticket,
+    ):
         mock_freshdesk_ticket_creation(mock_create_ticket, ticket_id)
         mock_freshdesk_reply_to_ticket(mock_reply_to_ticket)
         # GIVEN we have an order with samples that is already in the database
diff --git a/tests/meta/workflow/test_analysis.py b/tests/meta/workflow/test_analysis.py
index abc03460d6..8f5e5b2279 100644
--- a/tests/meta/workflow/test_analysis.py
+++ b/tests/meta/workflow/test_analysis.py
@@ -17,9 +17,9 @@
 from cg.meta.workflow.mip import MipAnalysisAPI
 from cg.meta.workflow.mip_dna import MipDNAAnalysisAPI
 from cg.meta.workflow.prepare_fastq import PrepareFastqAPI
-from cg.meta.workflow.utils.utils import are_all_samples_control, MAP_TO_TRAILBLAZER_PRIORITY
+from cg.meta.workflow.utils.utils import MAP_TO_TRAILBLAZER_PRIORITY, are_all_samples_control
 from cg.models.fastq import FastqFileMeta
-from cg.store.models import Case, Sample, IlluminaSequencingRun
+from cg.store.models import Case, IlluminaSequencingRun, Sample
 from cg.store.store import Store
 from tests.store_helpers import StoreHelpers
 
@@ -259,13 +259,16 @@ def test_ensure_illumina_runs_on_disk_does_not_request_runs(
     # GIVEN a case
 
     # WHEN _is_illumina_run_check_available returns True and the attached flow cell is ON_DISK
-    with mock.patch.object(
-        AnalysisAPI,
-        "_is_illumina_run_check_applicable",
-        return_value=True,
-    ), mock.patch.object(
-        Store, "request_sequencing_runs_for_case", return_value=None
-    ) as request_checker:
+    with (
+        mock.patch.object(
+            AnalysisAPI,
+            "_is_illumina_run_check_applicable",
+            return_value=True,
+        ),
+        mock.patch.object(
+            Store, "request_sequencing_runs_for_case", return_value=None
+        ) as request_checker,
+    ):
         mip_analysis_api.ensure_illumina_run_on_disk(selected_novaseq_x_case_ids[0])
 
     # THEN runs should not be requested for the case
@@ -318,9 +321,10 @@ def test_is_case_ready_for_analysis_true(
     # GIVEN a case and a flow cell with status ON_DISK
 
     # GIVEN that no decompression is needed nor running
-    with mock.patch.object(
-        PrepareFastqAPI, "is_spring_decompression_needed", return_value=False
-    ), mock.patch.object(PrepareFastqAPI, "is_spring_decompression_running", return_value=False):
+    with (
+        mock.patch.object(PrepareFastqAPI, "is_spring_decompression_needed", return_value=False),
+        mock.patch.object(PrepareFastqAPI, "is_spring_decompression_running", return_value=False),
+    ):
         # WHEN running is_case_ready_for_analysis
 
         # THEN the result should be true
@@ -338,9 +342,10 @@ def test_is_case_ready_for_analysis_decompression_needed(
     # GIVEN a case and an Illumina run
 
     # GIVEN that some files need to be decompressed
-    with mock.patch.object(
-        PrepareFastqAPI, "is_spring_decompression_needed", return_value=True
-    ), mock.patch.object(PrepareFastqAPI, "is_spring_decompression_running", return_value=False):
+    with (
+        mock.patch.object(PrepareFastqAPI, "is_spring_decompression_needed", return_value=True),
+        mock.patch.object(PrepareFastqAPI, "is_spring_decompression_running", return_value=False),
+    ):
         # WHEN running is_case_ready_for_analysis
         # THEN the result should be false
         assert not mip_analysis_api.is_raw_data_ready_for_analysis(selected_novaseq_x_case_ids[0])
@@ -357,9 +362,10 @@ def test_is_case_ready_for_analysis_decompression_running(
     # GIVEN a case and a Illumina sequencing run
 
     # GIVEN that some files are being decompressed
-    with mock.patch.object(
-        PrepareFastqAPI, "is_spring_decompression_needed", return_value=False
-    ), mock.patch.object(PrepareFastqAPI, "is_spring_decompression_running", return_value=True):
+    with (
+        mock.patch.object(PrepareFastqAPI, "is_spring_decompression_needed", return_value=False),
+        mock.patch.object(PrepareFastqAPI, "is_spring_decompression_running", return_value=True),
+    ):
         # WHEN running is_case_ready_for_analysis
         # THEN the result should be false
         assert not mip_analysis_api.is_raw_data_ready_for_analysis(selected_novaseq_x_case_ids[0])
@@ -383,16 +389,21 @@ def test_prepare_fastq_files_success(
     # GIVEN a case with an Illumina run ON_DISK
 
     # GIVEN that no decompression is or running and adding the files to Housekeeper goes well
-    with mock.patch.object(
-        PrepareFastqAPI,
-        "is_spring_decompression_needed",
-        return_value=is_spring_decompression_needed,
-    ), mock.patch.object(MipAnalysisAPI, "decompress_case", return_value=None), mock.patch.object(
-        PrepareFastqAPI,
-        "is_spring_decompression_running",
-        return_value=is_spring_decompression_running,
-    ), mock.patch.object(
-        PrepareFastqAPI, "add_decompressed_fastq_files_to_housekeeper", return_value=None
+    with (
+        mock.patch.object(
+            PrepareFastqAPI,
+            "is_spring_decompression_needed",
+            return_value=is_spring_decompression_needed,
+        ),
+        mock.patch.object(MipAnalysisAPI, "decompress_case", return_value=None),
+        mock.patch.object(
+            PrepareFastqAPI,
+            "is_spring_decompression_running",
+            return_value=is_spring_decompression_running,
+        ),
+        mock.patch.object(
+            PrepareFastqAPI, "add_decompressed_fastq_files_to_housekeeper", return_value=None
+        ),
     ):
         # WHEN running prepare_fastq_files
         if is_spring_decompression_running or is_spring_decompression_needed:
@@ -417,17 +428,17 @@ def test_prepare_fastq_files_request_miria(
     case.customer.data_archive_location = ArchiveLocations.KAROLINSKA_BUCKET
 
     # GIVEN that at least one file is archived and not retrieved
-    with mock.patch.object(
-        PrepareFastqAPI, "is_spring_decompression_needed", return_value=False
-    ), mock.patch.object(
-        PrepareFastqAPI, "is_spring_decompression_running", return_value=False
-    ), mock.patch.object(
-        PrepareFastqAPI, "add_decompressed_fastq_files_to_housekeeper", return_value=None
-    ), mock.patch.object(
-        SpringArchiveAPI, "retrieve_spring_files_for_case"
-    ), mock.patch.object(
-        AnalysisAPI, "is_raw_data_ready_for_analysis", return_value=False
-    ) as request_submitter:
+    with (
+        mock.patch.object(PrepareFastqAPI, "is_spring_decompression_needed", return_value=False),
+        mock.patch.object(PrepareFastqAPI, "is_spring_decompression_running", return_value=False),
+        mock.patch.object(
+            PrepareFastqAPI, "add_decompressed_fastq_files_to_housekeeper", return_value=None
+        ),
+        mock.patch.object(SpringArchiveAPI, "retrieve_spring_files_for_case"),
+        mock.patch.object(
+            AnalysisAPI, "is_raw_data_ready_for_analysis", return_value=False
+        ) as request_submitter,
+    ):
         with pytest.raises(AnalysisNotReadyError):
             # WHEN running prepare_fastq_files
 
@@ -455,12 +466,12 @@ def test_prepare_fastq_files_does_not_request_miria(
     case.customer.data_archive_location = ArchiveLocations.KAROLINSKA_BUCKET
 
     # GIVEN that all Illumina runs have status on disk
-    with mock.patch.object(
-        PrepareFastqAPI, "is_spring_decompression_needed", return_value=False
-    ), mock.patch.object(
-        PrepareFastqAPI, "is_spring_decompression_running", return_value=False
-    ), mock.patch.object(
-        PrepareFastqAPI, "add_decompressed_fastq_files_to_housekeeper", return_value=None
+    with (
+        mock.patch.object(PrepareFastqAPI, "is_spring_decompression_needed", return_value=False),
+        mock.patch.object(PrepareFastqAPI, "is_spring_decompression_running", return_value=False),
+        mock.patch.object(
+            PrepareFastqAPI, "add_decompressed_fastq_files_to_housekeeper", return_value=None
+        ),
     ):
         # WHEN running prepare_fastq_files
 
@@ -516,10 +527,13 @@ def test_ensure_files_are_present(
 
     # WHEN ensuring that all files are present
 
-    with mock.patch.object(AnalysisAPI, "ensure_illumina_run_on_disk"), mock.patch.object(
-        SpringArchiveAPI,
-        "retrieve_spring_files_for_case",
-    ) as request_submitter:
+    with (
+        mock.patch.object(AnalysisAPI, "ensure_illumina_run_on_disk"),
+        mock.patch.object(
+            SpringArchiveAPI,
+            "retrieve_spring_files_for_case",
+        ) as request_submitter,
+    ):
         mip_analysis_api.ensure_files_are_present(case_id)
 
     # THEN the files should have been requested
diff --git a/tests/meta/workflow/test_prepare_fastq_api.py b/tests/meta/workflow/test_prepare_fastq_api.py
index eea4eec8b3..f079022020 100644
--- a/tests/meta/workflow/test_prepare_fastq_api.py
+++ b/tests/meta/workflow/test_prepare_fastq_api.py
@@ -136,9 +136,14 @@ def test_fastq_should_be_added_to_housekeeper(
     nr_of_files_before: int = len(list(version_object.files))
 
     # GIVEN that the decompressed files exist
-    with mock.patch.object(
-        CompressionData, "file_exists_and_is_accessible", return_value=file_exists_and_is_accessible
-    ), mock.patch.object(crunchy.files, "get_crunchy_metadata", returnvalue=[]):
+    with (
+        mock.patch.object(
+            CompressionData,
+            "file_exists_and_is_accessible",
+            return_value=file_exists_and_is_accessible,
+        ),
+        mock.patch.object(crunchy.files, "get_crunchy_metadata", returnvalue=[]),
+    ):
         # WHEN adding decompressed fastq files
         prepare_fastq_api.add_decompressed_fastq_files_to_housekeeper(case_id)
 
@@ -190,17 +195,21 @@ def test_add_decompressed_sample_loops_through_spring(
     case = analysis_store.get_case_by_internal_id(case_id)
     sample = case.samples[0]
 
-    with mock.patch.object(
-        files,
-        "get_hk_files_dict",
-        return_value={},
-    ), mock.patch.object(
-        files,
-        "get_spring_paths",
-        return_value=[CompressionData(spring_file.with_suffix(""))],
-    ), mock.patch.object(
-        CompressAPI, "add_decompressed_fastq", return_value=True
-    ) as request_submitter:
+    with (
+        mock.patch.object(
+            files,
+            "get_hk_files_dict",
+            return_value={},
+        ),
+        mock.patch.object(
+            files,
+            "get_spring_paths",
+            return_value=[CompressionData(spring_file.with_suffix(""))],
+        ),
+        mock.patch.object(
+            CompressAPI, "add_decompressed_fastq", return_value=True
+        ) as request_submitter,
+    ):
         # WHEN adding decompressed fastq files to Housekeeper
         prepare_fastq_api.add_decompressed_sample(case=case, sample=sample)
 
diff --git a/tests/services/file_delivery/file_formatter/destination/test_formatting_service.py b/tests/services/file_delivery/file_formatter/destination/test_formatting_service.py
index 218ad69c58..5771810ce9 100644
--- a/tests/services/file_delivery/file_formatter/destination/test_formatting_service.py
+++ b/tests/services/file_delivery/file_formatter/destination/test_formatting_service.py
@@ -1,21 +1,20 @@
 from pathlib import Path
 
 import mock
+import pytest
 
 from cg.services.deliver_files.file_fetcher.models import (
-    DeliveryFiles,
-    SampleFile,
     CaseFile,
+    DeliveryFiles,
     DeliveryMetaData,
+    SampleFile,
 )
 from cg.services.deliver_files.file_formatter.destination.abstract import (
     DeliveryDestinationFormatter,
 )
-import pytest
-
 from cg.services.deliver_files.file_formatter.destination.models import (
-    FormattedFiles,
     FormattedFile,
+    FormattedFiles,
 )
 
 
@@ -69,12 +68,15 @@ def test_reformat_files(
         files.extend(formatted_case_files)
 
     expected_formatted_files = FormattedFiles(files=files)
-    with mock.patch(
-        "cg.services.deliver_files.file_formatter.files.sample_service.SampleFileFormatter.format_files",
-        return_value=formatted_sample_files,
-    ), mock.patch(
-        "cg.services.deliver_files.file_formatter.files.case_service.CaseFileFormatter.format_files",
-        return_value=formatted_case_files,
+    with (
+        mock.patch(
+            "cg.services.deliver_files.file_formatter.files.sample_service.SampleFileFormatter.format_files",
+            return_value=formatted_sample_files,
+        ),
+        mock.patch(
+            "cg.services.deliver_files.file_formatter.files.case_service.CaseFileFormatter.format_files",
+            return_value=formatted_case_files,
+        ),
     ):
         # WHEN reformatting the delivery files
         formatted_files: FormattedFiles = formatter_service.format_files(mock_delivery_files)
diff --git a/tests/services/illumina/cleaning/test_clean_runs_service.py b/tests/services/illumina/cleaning/test_clean_runs_service.py
index e1aaa77b18..cc7c3c9827 100644
--- a/tests/services/illumina/cleaning/test_clean_runs_service.py
+++ b/tests/services/illumina/cleaning/test_clean_runs_service.py
@@ -11,16 +11,10 @@
 from cg.apps.housekeeper.hk import HousekeeperAPI
 from cg.constants import SequencingFileTag
 from cg.constants.time import TWENTY_ONE_DAYS_IN_SECONDS
-from cg.exc import IlluminaCleanRunError, HousekeeperFileMissingError
-from cg.services.illumina.cleaning.clean_runs_service import (
-    IlluminaCleanRunsService,
-)
+from cg.exc import HousekeeperFileMissingError, IlluminaCleanRunError
+from cg.services.illumina.cleaning.clean_runs_service import IlluminaCleanRunsService
 from cg.store.exc import EntryNotFoundError
-from cg.store.models import (
-    Sample,
-    IlluminaSequencingRun,
-    IlluminaSampleSequencingMetrics,
-)
+from cg.store.models import IlluminaSampleSequencingMetrics, IlluminaSequencingRun, Sample
 from tests.store_helpers import StoreHelpers
 
 
@@ -299,15 +293,19 @@ def test_can_sequencing_run_be_deleted_no_spring_no_fastq(
 ):
     """Test that a sequencing run can not be deleted when it has no spring files and no fastq files."""
     # GIVEN a sequencing run that can be deleted
-    with mock.patch(
-        "cg.services.illumina.cleaning.clean_runs_service.IlluminaCleanRunsService.is_directory_older_than_21_days",
-        return_value=True,
-    ), mock.patch(
-        "cg.services.illumina.cleaning.clean_runs_service.IlluminaCleanRunsService.has_fastq_files_for_samples_in_housekeeper",
-        return_value=False,
-    ), mock.patch(
-        "cg.services.illumina.cleaning.clean_runs_service.IlluminaCleanRunsService.has_spring_meta_data_files_for_samples_in_housekeeper",
-        return_value=False,
+    with (
+        mock.patch(
+            "cg.services.illumina.cleaning.clean_runs_service.IlluminaCleanRunsService.is_directory_older_than_21_days",
+            return_value=True,
+        ),
+        mock.patch(
+            "cg.services.illumina.cleaning.clean_runs_service.IlluminaCleanRunsService.has_fastq_files_for_samples_in_housekeeper",
+            return_value=False,
+        ),
+        mock.patch(
+            "cg.services.illumina.cleaning.clean_runs_service.IlluminaCleanRunsService.has_spring_meta_data_files_for_samples_in_housekeeper",
+            return_value=False,
+        ),
     ):
         # WHEN checking that the sequencing run can be deleted
 
diff --git a/tests/services/illumina/post_processing/test_housekeeper_storage.py b/tests/services/illumina/post_processing/test_housekeeper_storage.py
index ceea5bc2dc..df902c0f26 100644
--- a/tests/services/illumina/post_processing/test_housekeeper_storage.py
+++ b/tests/services/illumina/post_processing/test_housekeeper_storage.py
@@ -36,16 +36,19 @@ def test_add_fastq_files_to_housekeeper(
         assert hk_api.get_files(tags=[SequencingFileTag.FASTQ], bundle=sample_id).count() == 0
 
     # GIVEN a demultiplexed run dir data with a sample sheet and samples
-    with patch.object(
-        target=IlluminaRunDirectoryData,
-        attribute="sample_sheet",
-        new_callable=PropertyMock(
-            return_value=novaseq_6000_post_1_5_kits_sample_sheet_with_selected_samples
+    with (
+        patch.object(
+            target=IlluminaRunDirectoryData,
+            attribute="sample_sheet",
+            new_callable=PropertyMock(
+                return_value=novaseq_6000_post_1_5_kits_sample_sheet_with_selected_samples
+            ),
+        ),
+        patch.object(
+            target=IlluminaRunDirectoryData,
+            attribute="get_demultiplexed_runs_dir",
+            return_value=tmp_demultiplexed_novaseq_6000_post_1_5_kits_path,
         ),
-    ), patch.object(
-        target=IlluminaRunDirectoryData,
-        attribute="get_demultiplexed_runs_dir",
-        return_value=tmp_demultiplexed_novaseq_6000_post_1_5_kits_path,
     ):
         # WHEN adding the sample fastq files to Housekeeper
         add_sample_fastq_files_to_housekeeper(
diff --git a/tests/services/pdc_service/test_pdc_service.py b/tests/services/pdc_service/test_pdc_service.py
index f0760ee7b1..d274d38bd5 100644
--- a/tests/services/pdc_service/test_pdc_service.py
+++ b/tests/services/pdc_service/test_pdc_service.py
@@ -1,12 +1,12 @@
 """Tests for the meta PdcAPI"""
 
 from unittest import mock
+
 import pytest
+
 from cg.constants import EXIT_FAIL
 from cg.constants.process import EXIT_WARNING
-from cg.exc import (
-    PdcError,
-)
+from cg.exc import PdcError
 from cg.models.cg_config import CGConfig
 from tests.conftest import create_process_response
 
@@ -80,9 +80,12 @@ def test_run_dsmc_command_fail(cg_context: CGConfig):
     pdc_service = cg_context.pdc_service
 
     # GIVEN an exit code signifying failure
-    with pytest.raises(PdcError), mock.patch(
-        "cg.utils.commands.subprocess.run",
-        return_value=create_process_response(return_code=EXIT_FAIL),
+    with (
+        pytest.raises(PdcError),
+        mock.patch(
+            "cg.utils.commands.subprocess.run",
+            return_value=create_process_response(return_code=EXIT_FAIL),
+        ),
     ):
         # WHEN running a dsmc command
         pdc_service.run_dsmc_command(["archive", "something"])
diff --git a/tests/services/run_devices/pacbio/store_service/test_store_service.py b/tests/services/run_devices/pacbio/store_service/test_store_service.py
index c94d9f6160..8ecc69463d 100644
--- a/tests/services/run_devices/pacbio/store_service/test_store_service.py
+++ b/tests/services/run_devices/pacbio/store_service/test_store_service.py
@@ -97,10 +97,13 @@ def test_store_post_processing_data_error_database(
     # GIVEN a store that raises an error when creating a PacBio SMRT cell
 
     # WHEN trying to store data for a Pacbio instrument run
-    with mock.patch(
-        "cg.services.run_devices.pacbio.data_transfer_service.data_transfer_service.PacBioDataTransferService.get_post_processing_dtos",
-        return_value=pac_bio_dtos,
-    ), mock.patch.object(Store, "create_pac_bio_smrt_cell", side_effect=ValueError):
+    with (
+        mock.patch(
+            "cg.services.run_devices.pacbio.data_transfer_service.data_transfer_service.PacBioDataTransferService.get_post_processing_dtos",
+            return_value=pac_bio_dtos,
+        ),
+        mock.patch.object(Store, "create_pac_bio_smrt_cell", side_effect=ValueError),
+    ):
         # THEN a PostProcessingStoreDataError is raised
         with pytest.raises(PostProcessingStoreDataError):
             pac_bio_store_service.store_post_processing_data(pacbio_barcoded_run_data)
@@ -116,13 +119,16 @@ def test_store_post_processing_data_error_parser(
     # GIVEN a data transfer service that raises an error when parsing data
 
     # WHEN trying to store data for a PacBio instrument ru
-    with mock.patch(
-        "cg.services.run_devices.pacbio.data_transfer_service.data_transfer_service.PacBioDataTransferService.get_post_processing_dtos",
-        return_value=pac_bio_dtos,
-    ), mock.patch.object(
-        PacBioDataTransferService,
-        "get_post_processing_dtos",
-        side_effect=PostProcessingDataTransferError,
+    with (
+        mock.patch(
+            "cg.services.run_devices.pacbio.data_transfer_service.data_transfer_service.PacBioDataTransferService.get_post_processing_dtos",
+            return_value=pac_bio_dtos,
+        ),
+        mock.patch.object(
+            PacBioDataTransferService,
+            "get_post_processing_dtos",
+            side_effect=PostProcessingDataTransferError,
+        ),
     ):
         # THEN a PostProcessingStoreDataError is raised
         with pytest.raises(PostProcessingStoreDataError):