From 48e04633d11529101bc849ed449f5c59b85768cd Mon Sep 17 00:00:00 2001 From: Christian Oertlin Date: Mon, 2 Sep 2024 10:37:32 +0200 Subject: [PATCH] remove concatenate --- cg/cli/deliver/base.py | 13 ------------- 1 file changed, 13 deletions(-) diff --git a/cg/cli/deliver/base.py b/cg/cli/deliver/base.py index ee2615965f..54b69195ec 100644 --- a/cg/cli/deliver/base.py +++ b/cg/cli/deliver/base.py @@ -109,19 +109,6 @@ def deliver_analysis( ) -@deliver.command(name="concatenate") -@DRY_RUN -@TICKET_ID_ARG -@click.pass_context -def concatenate(context: click.Context, ticket: str, dry_run: bool): - """The fastq files in the folder generated using "cg deliver analysis" - will be concatenated into one forward and one reverse fastq file - """ - cg_context: CGConfig = context.obj - deliver_ticket_api = DeliverTicketAPI(config=cg_context) - deliver_ticket_api.concatenate_fastq_files(ticket=ticket, dry_run=dry_run) - - @deliver.command(name="ticket") @DELIVERY_TYPE @DRY_RUN