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CHANGES.txt
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CHANGES.txt
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------------------------------------------------------------------------
r276 | gaser | 2024-07-08 21:02:45
Changed paths:
M CHANGES.txt
M cat_spm_results_ui.m
M tfce_estimate_stat.m
Fixed: Added checks for additional cat-tools that should be ignored if CAT12
is not installed.
------------------------------------------------------------------------
r273 | gaser | 2024-04-03 12:25:11
Changed paths:
M CHANGES.txt
M tfce_estimate_stat.m
Changed: Removed variance smoothing.
------------------------------------------------------------------------
r272 | gaser | 2024-04-03 12:19:39
Changed paths:
M CHANGES.txt
M cat_spm_results_ui.m
M html/tfce.html
M html/tfce.txt
M tbx_cfg_tfce.m
M tfceMex_pthread.c
M tfce_estimate_stat.m
Changed: Removed bilateral filter that showed no improvement.
Changed: Removed option to change E_weight.
Changed: Added memore allocation check.
Changed: Use mat-format of SPM defaults for saving mat-files.
------------------------------------------------------------------------
r271 | gaser | 2023-08-18 18:38:19
Changed paths:
M CHANGES.txt
M spm_TFCE.m
M tbx_cfg_tfce.m
M tfce_estimate_stat.m
Changed: Updated function headers.
------------------------------------------------------------------------
r270 | gaser | 2023-05-12 08:37:15
Changed paths:
M CHANGES.txt
M Contents.m
M INSTALL.txt
M html/tfce.html
M old_tfce_results_ui.m
M tfce_estimate_stat.m
Changed: Some minor cosmetic edits.
------------------------------------------------------------------------
r269 | gaser | 2023-05-11 15:14:21
Changed paths:
M CHANGES.txt
M tfce_estimate_stat.m
Changed: Added warning if covariates are found for longitudinal designs.
Changed: Added check that at least two time points are found for longitudinal
designs.
------------------------------------------------------------------------
r268 | gaser | 2023-05-04 13:55:32
Changed paths:
M CHANGES.txt
M cat_spm_results_ui.m
M tfceMex_pthread.m
Fixed: Corrected definition of contrast images when analysis folder was moved.
------------------------------------------------------------------------
r267 | gaser | 2023-04-17 10:21:02
Changed paths:
M CHANGES.txt
M tfceMex_pthread.m
M tfceMex_pthread.mexmaca64
M tfceMex_pthread.mexmaci64
M tfce_estimate_stat.m
M tfce_list.m
M tfce_mesh.m
M tfce_progress.m
M tfce_surf_max.m
M tfce_update.m
Changed: Modified header with author information.
------------------------------------------------------------------------
r266 | gaser | 2023-03-22 17:52:50
Changed paths:
M CHANGES.txt
M tfce_estimate_stat.m
M tfce_getSPM.m
Fixed: Corrected cat12-template path in tfce_estimate_stat.m and
tfce_getSPM.m.
------------------------------------------------------------------------
r265 | gaser | 2023-01-27 00:48:19
Changed paths:
M CHANGES.txt
M Contents.m
M INSTALL.txt
M Makefile
M cat_spm_results_ui.m
M html/tfce.html
M update_revision.sh
Changed: Updated cat_spm_results_ui.m from CAT12.
Changed: Removed unnecessary line in update_revision.sh.
Fixed: Added "-O" flag to scp command in Makefile.
------------------------------------------------------------------------
r264 | gaser | 2023-01-20 10:35:10
Changed paths:
M CHANGES.txt
M tfceMex_pthread.c
M tfce_getSPM.m
Changed: Reformatted tfceMex_pthread.c
Changed: Added warning if SPM12 estimate function was used instead of CAT12
Estimate Surface Models.
------------------------------------------------------------------------
r263 | gaser | 2023-01-12 17:57:57
Changed paths:
M CHANGES.txt
M tfce_estimate_stat.m
Changed: Added check whether permutation was already used because
for some designs number of maximal permutations might differ.
------------------------------------------------------------------------
r261 | gaser | 2022-12-27 16:17:23
Changed paths:
M CHANGES.txt
M tfce_estimate_stat.m
Changed: Added new and hopefully faster pinv2 method that is also stable to
tfce_estimate_stats.m. This method is based on faster svd function by
Vipin Vijayan.
Changed: Added check for voxel-wise covariate which pinv methid is faster in
tfce_estimate_stats.m.
------------------------------------------------------------------------
r260 | gaser | 2022-12-07 15:21:22
Changed paths:
M CHANGES.txt
M tfce_estimate_stat.m
Changed: Increased threshold when for disabling muli-threading.
------------------------------------------------------------------------
r259 | gaser | 2022-12-02 16:32:00
Changed paths:
M CHANGES.txt
M Contents.m
M INSTALL.txt
M html/tfce.html
M tfce_estimate_stat.m
M tfce_progress.m
Changed: Again switched back to slower but more accuaret approach for voxel-wise
covariates.
Changed: Added pinv2 function that is much fast than Matlab builtin pinv.
Changed: Many smaller changes to increase speed for voxel-wise covariate.
Deleted: Removed code from Chris Rorden that was not faster.
------------------------------------------------------------------------
r258 | gaser | 2022-12-02 16:31:16
Changed paths:
M CHANGES.txt
M Contents.m
M INSTALL.txt
M html/tfce.html
M tfce_estimate_stat.m
M tfce_progress.m
D tfce_pthread_ChrisRordan.c
Changed: Again switched back to slower but more accuaret approach for voxel-wise
covariates.
Changed: Added pinv2 function that is much fast than Matlab builtin pinv.
Changed: Many smaller changes to increase speed for voxel-wise covariate.
Deleted: Removed code from Chris Rorden that was not faster.
------------------------------------------------------------------------
r256 | gaser | 2022-11-29 00:02:25
Changed paths:
M CHANGES.txt
M Contents.m
M INSTALL.txt
M html/tfce.html
M tfce_estimate_stat.m
Fixed: Corrected use of spm_Fcdf for F-statistic.
Fixed: Corrected use of additional mask with F-statistic.
------------------------------------------------------------------------
r255 | gaser | 2022-11-23 12:07:31
Changed paths:
M CHANGES.txt
M Contents.m
M INSTALL.txt
M html/tfce.html
A tfceMex_pthread.mexmaca64
Changed: Compiled mex-file for MACA64.
------------------------------------------------------------------------
r254 | gaser | 2022-11-11 00:01:44
Changed paths:
M CHANGES.txt
M tfce_estimate_stat.m
Changed: Added check for different mask images or missing absolute threshold or
VBM analysis in tfce_estimate.m.
Changed: Modified ResMS (a form of shrinkage) to avoid problems of very low
variance as used in spm_spm.m
------------------------------------------------------------------------
r253 | gaser | 2022-11-09 21:56:55
Changed paths:
M CHANGES.txt
M tfce_update.m
Fixed: Corrected TFCE path.
------------------------------------------------------------------------
r251 | gaser | 2022-11-07 22:55:25
Changed paths:
MM CHANGES.txt
Changed: Updated toolbox paths.
Changed: Updated update function.
Added: Created shell script to update revision number.
------------------------------------------------------------------------
r250 | gaser | 2022-11-07 22:55:04
Changed paths:
M CHANGES.txt
M Makefile
M tfce_estimate_stat.m
M tfce_getSPM.m
M tfce_update.m
Changed: Updated toolbox paths.
Changed: Updated update function.
Added: Created shell script to update revision number.
------------------------------------------------------------------------
r250 | gaser | 2022-11-07 22:54:02
Changed paths:
M CHANGES.txt
M Makefile
M tfce_estimate_stat.m
M tfce_getSPM.m
M tfce_update.m
Changed: Updated toolbox paths.
Changed: Updated update function.
Added: Created shell script to update revision number.
------------------------------------------------------------------------
r249 | gaser | 2022-11-07 22:53:15
Changed paths:
M CHANGES.txt
M Makefile
M tfce_estimate_stat.m
M tfce_getSPM.m
M tfce_update.m
A update_revision.sh
Changed: Updated toolbox paths.
Changed: Updated update function.
Added: Created shell script to update revision number.
------------------------------------------------------------------------
r248 | gaser | 2022-10-05 00:48:15
Changed paths:
M CHANGES.txt
M Contents.m
M INSTALL.txt
M cat_spm_results_ui.m
M html/tfce.html
M spm_TFCE.m
Changed: Updated remaining hardcoded toolbox paths for TFCE.
-----------------------------------------------------------------------
r246 | gaser | 2022-08-19 16:29:30
Changed paths:
M CHANGES.txt
M tfce_estimate_stat.m
Fixed: Corrected check for voxelwise covariate.
------------------------------------------------------------------------
r234 | gaser | 2022-02-19 00:32:14
Changed paths:
M CHANGES.txt
M html/tfce.html
M tfce_estimate_stat.m
Changed: Save unpermuted statistics before starting permutations.
------------------------------------------------------------------------
r233 | gaser | 2022-02-19 00:26:26 +0100 (Sat, 19 Feb 2022) | 9 lines
Changed paths:
M CHANGES.txt
M tfce_estimate_stat.m
Changed: We assume that the null distribution will not change with voxel-wise
covariate and can therefore use the common design matrix without
voxel-wise covariates which is not that unbelievable slow.
------------------------------------------------------------------------
r232 | gaser | 2022-01-26 14:55:00 +0100 (Wed, 26 Jan 2022) | 8 lines
Changed paths:
M CHANGES.txt
M html/tfce.html
M tfce_estimate_stat.m
Fixed: Corrected bug for one-sample t-tests which lead to poor correlation to
parametric statistics, but occured quite rarely.
------------------------------------------------------------------------
r231 | gaser | 2022-01-25 17:13:14 +0100 (Tue, 25 Jan 2022) | 7 lines
Changed paths:
M CHANGES.txt
M html/tfce.html
M tfce_estimate_stat.m
Fixed: Corrected handling of multiple defined contrasts.
------------------------------------------------------------------------
r230 | gaser | 2022-01-13 15:55:12 +0100 (Thu, 13 Jan 2022) | 8 lines
Changed paths:
M CHANGES.txt
M html/tfce.html
M tfce_estimate_stat.m
Fixed: Corrected check for multithreading performance that was not correctly
working.
------------------------------------------------------------------------
r229 | gaser | 2022-01-11 14:36:51 +0100 (Tue, 11 Jan 2022) | 8 lines
Changed paths:
M CHANGES.txt
M html/tfce.html
M html/tfce_FN.html
M tfce_estimate_stat.m
Changed: Renamed maps for null distribution to nullT_*.
------------------------------------------------------------------------
r228 | gaser | 2022-01-11 14:20:14 +0100 (Tue, 11 Jan 2022) | 9 lines
Changed paths:
M CHANGES.txt
M html/tfce.html
M html/tfce_FN.html
M tfce_estimate_stat.m
(1) Changed: Use option to save null distribution by default.
(2) Changed: Updated help text for filenames.
------------------------------------------------------------------------
r227 | gaser | 2021-10-31 22:40:42 +0100 (Sun, 31 Oct 2021) | 6 lines
Changed paths:
M CHANGES.txt
M tfce_estimate_stat.m
Changed: Updated option to save null distribution as image.
------------------------------------------------------------------------
r226 | gaser | 2021-10-30 00:23:38 +0200 (Sat, 30 Oct 2021) | 7 lines
Changed paths:
M CHANGES.txt
M html/tfce.html
M tfce_estimate_stat.m
Changed: Added hidden option to save null distribution.
------------------------------------------------------------------------
r225 | gaser | 2021-10-25 09:09:26 +0200 (Mon, 25 Oct 2021) | 11 lines
Changed paths:
M CHANGES.txt
M html/tfce.html
M tfce_estimate_stat.m
(2) Changed: If only one contrast is defined skip interactive selection for that.
(1) Fixed: Added check for F-contrasts for effects of interest to
tfce_estimate_stat.m to correctly recognize number of
exchangeability blocks.
------------------------------------------------------------------------
r224 | gaser | 2021-10-22 16:34:05 +0200 (Fri, 22 Oct 2021) | 10 lines
Changed paths:
M CHANGES.txt
M cat_spm_results_ui.m
M html/tfce.html
M tfce_estimate_stat.m
(1) Changed: Updated check for installed atlases in cat_spm_results_ui.m.
(1) Fixed: Corrected check for existing TFCE results in cat_spm_results_ui.m.
(2) Fixed: Corrected check for multiple contrasts in tfce_estimate_stats.m.
------------------------------------------------------------------------
r223 | gaser | 2021-08-12 13:02:11 +0200 (Thu, 12 Aug 2021) | 10 lines
Changed paths:
M CHANGES.txt
M cat_spm_results_ui.m
M html/tfce.html
M tfce_estimate_stat.m
(1) Changed: Use a faster Freedman-Lane approach thanks to blog entry of Anderson
Winkler (https://brainder.org/2020/05/19/simplifying-freedman-lane).
(2) Fixed: Corrected issues with non-existing VSPM field in tfce_stat_estimate.m.
------------------------------------------------------------------------
r222 | gaser | 2021-06-30 12:19:27 +0200 (Wed, 30 Jun 2021) | 7 lines
Changed paths:
M CHANGES.txt
M cat_spm_results_ui.m
Fixed: Corrected path if results are called from another folder in
cat_spm_results_ui.m.
------------------------------------------------------------------------
r221 | gaser | 2021-05-31 22:58:50 +0200 (Mon, 31 May 2021) | 5 lines
Changed paths:
M CHANGES.txt
Changed: Allow voxel-wise covariate for longitudinal designs.
------------------------------------------------------------------------
r220 | gaser | 2021-05-30 19:24:34 +0200 (Sun, 30 May 2021) | 7 lines
Changed paths:
M CHANGES.txt
M html/tfce.html
M tfce_estimate_stat.m
Changed: Allow voxel-wise covariate for longitudinal designs.
------------------------------------------------------------------------
r219 | gaser | 2021-04-30 17:48:52 +0200 (Fri, 30 Apr 2021) | 7 lines
Changed paths:
M CHANGES.txt
M html/tfce.html
M tfce_estimate_stat.m
Changed: Shortened text in GUI window.
------------------------------------------------------------------------
r218 | gaser | 2021-04-30 17:47:20 +0200 (Fri, 30 Apr 2021) | 7 lines
Changed paths:
M CHANGES.txt
M tfce_estimate_stat.m
Fixed: Corrected handling of voxel-wise covariates for subsequent calls of
tfce_estimates.m
------------------------------------------------------------------------
r217 | gaser | 2021-04-23 00:14:31 +0200 (Fri, 23 Apr 2021) | 6 lines
Changed paths:
M CHANGES.txt
M tfce_estimate_stat.m
Fixed: Corrected handling of parallel processing that ignored subsequent data.
------------------------------------------------------------------------
r216 | gaser | 2021-04-15 21:52:33 +0200 (Thu, 15 Apr 2021) | 10 lines
Changed paths:
M CHANGES.txt
M Makefile
M html/tfce.html
M tfce_estimate_stat.m
(1) Fixed: Corrected check whether design should be estimated.
(2) Changed: Updated Makefile.
------------------------------------------------------------------------
r215 | gaser | 2021-04-15 19:48:39 +0200 (Thu, 15 Apr 2021) | 11 lines
Changed paths:
M CHANGES.txt
M cat_spm_results_ui.m
M html/tfce.html
M tbx_cfg_tfce.m
M tfce_estimate_stat.m
(1) Changed: Updated cat_spm_results_ui.m w.r.t. CAT12.
(2) Changed: Removed SPM8 support.
(3) Changed: Added support to use voxel-wise covariates.
------------------------------------------------------------------------
r214 | gaser | 2021-02-05 10:25:58 +0100 (Fri, 05 Feb 2021) | 7 lines
Changed paths:
M CHANGES.txt
M tfce_estimate_stat.m
Fixed: Interactive selection with defining contrast as Inf was not working.
------------------------------------------------------------------------
r213 | gaser | 2021-02-05 00:16:01 +0100 (Fri, 05 Feb 2021) | 7 lines
Changed paths:
M CHANGES.txt
M cat_spm_results_ui.m
Fixed: Calling cat_spm_results_ui from other functions now works correctly.
------------------------------------------------------------------------
r212 | gaser | 2020-12-02 23:58:03 +0100 (Wed, 02 Dec 2020) | 7 lines
Changed paths:
M CHANGES.txt
M tfce_estimate_stat.m
Fixed: Check that scl_slope field exist for global scaling of surfaces.
------------------------------------------------------------------------
r211 | gaser | 2020-11-25 17:12:05 +0100 (Wed, 25 Nov 2020) | 16 lines
Changed paths:
M CHANGES.txt
M cat_spm_results_ui.m
M html/tfce.html
M html/tfce_FN.html
A + old_tfce_results_ui.m
> moved from tfce_results_ui.m
D tfce_results_ui.m
> moved to old_tfce_results_ui.m
(1) Fixed: Corrected a typo in html file that called cat_vol_slice_overlay
(thanks to Do-Joon Yi for pointing to that issue).
(2) Removed: Removed oldtfce_results_ui.m which is not needed anymore because
now always cat_spm_results_ui.m is used for both CAT12 and TFCE.
(3) Changed: Use updated cat_spm_results_ui.m from CAT12.
------------------------------------------------------------------------
r210 | gaser | 2020-11-24 15:00:29 +0100 (Tue, 24 Nov 2020) | 13 lines
Changed paths:
M CHANGES.txt
M html/tfce.html
M spm_TFCE.m
M tbx_cfg_tfce.m
M tfceMex_pthread.c
M tfce_estimate_stat.m
(1) Fixed: Calculation of multiple SPM.mat files failed if nproc was set to "0".
(2) Changed: Changed data field to support call via cat_standalone.sh.
(3) Changed: Re-implemented option to use old method to estimate maximum
statistics from r184 for compatibility purposes.
------------------------------------------------------------------------
r209 | gaser | 2020-09-29 13:59:27 +0200 (Tue, 29 Sep 2020) | 8 lines
Changed paths:
M CHANGES.txt
M html/tfce.html
M tfce_estimate_stat.m
Fixed: Recognition of missing contrasts did not always work.
------------------------------------------------------------------------
r208 | gaser | 2020-09-29 13:00:39 +0200 (Tue, 29 Sep 2020) | 7 lines
Changed paths:
M CHANGES.txt
M tfce_estimate_stat.m
Fixed: Always the first contrast was used independent of contrast
selection in tfce_estimate_stat.m in r207.
------------------------------------------------------------------------
r207 | gaser | 2020-09-11 11:31:21 +0200 (Fri, 11 Sep 2020) | 10 lines
Changed paths:
M CHANGES.txt
M Makefile
M html/tfce.html
M tfce_estimate_stat.m
(1) Changed: Interactive selection of contrasts is not necessary anymore of
only one contrast is defined.
(2) Changed: Updated Makefile.
------------------------------------------------------------------------
r206 | gaser | 2020-08-19 15:48:12 +0200 (Wed, 19 Aug 2020) | 8 lines
Changed paths:
M CHANGES.txt
M html/tfce.html
M tbx_cfg_tfce.m
M tfce_estimate_stat.m
Changed: Updated help text.
------------------------------------------------------------------------
r205 | gaser | 2020-08-19 15:30:02 +0200 (Wed, 19 Aug 2020) | 11 lines
Changed paths:
M CHANGES.txt
M Makefile
M tbx_cfg_tfce.m
M tfce_estimate_stat.m
(1) Changed: Added option for multiple processes to TFCE.
(2) Changed: Updated Makefile.
(3) Fixed: Corrected check for validity of design using correlation between
parametric and permutation tests for SVC with external mask.
------------------------------------------------------------------------
r204 | gaser | 2020-08-03 14:03:16 +0200 (Mon, 03 Aug 2020) | 10 lines
Changed paths:
M CHANGES.txt
M cat_spm_results_ui.m
M html/tfce.html
M tfce_estimate_stat.m
(1) Changed: Updated cat_spm_results_ui.m using newest version from CAT12.
(2) Changed: Added option for using old method for estimating maximum statistic
from release r184 for compatibility purposes.
------------------------------------------------------------------------
r203 | gaser | 2020-06-23 10:56:50 +0200 (Tue, 23 Jun 2020) | 10 lines
Changed paths:
M CHANGES.txt
M Contents_info.txt
M cat_spm_results_ui.m
M html/tfce.html
M tbx_cfg_tfce.m
(1) Changed: Updated cat_spm_results_ui.m using newest version from CAT12.
(2) Changed: Updated help text.
------------------------------------------------------------------------
r202 | gaser | 2020-05-29 15:14:31 +0200 (Fri, 29 May 2020) | 7 lines
Changed paths:
M CHANGES.txt
M html/tfce.html
M tfce_estimate_stat.m
Fixed: Solved issue if covariates across multiple columns were zero.
------------------------------------------------------------------------
r201 | gaser | 2020-04-21 22:38:48 +0200 (Tue, 21 Apr 2020) | 9 lines
Changed paths:
M CHANGES.txt
M Makefile
M cat_spm_results_ui.m
M html/tfce.html
Fixed: Removed dome inconsitencies in cat_spm_results_ui.m where existing
TFCE results were initially not found.
------------------------------------------------------------------------
r200 | gaser | 2020-04-20 22:26:23 +0200 (Mon, 20 Apr 2020) | 9 lines
Changed paths:
M CHANGES.txt
M cat_spm_results_ui.m
M html/tfce.html
Fixed: Removed bug in cat_spm_results_ui.m where surface results could not
be displayed.
------------------------------------------------------------------------
r199 | gaser | 2020-04-13 02:11:38 +0200 (Mon, 13 Apr 2020) | 8 lines
Changed paths:
M CHANGES.txt
M cat_spm_results_ui.m
M html/tfce.html
Fixed: Corrected bug with non-detectable call_list function in
cat_spm_results_ui.m
------------------------------------------------------------------------
r198 | gaser | 2020-04-13 01:50:47 +0200 (Mon, 13 Apr 2020) | 6 lines
Changed paths:
M CHANGES.txt
M tfce_getSPM.m
Fixed: Corrected mesh detection to be compatible to older versions.
------------------------------------------------------------------------
r197 | gaser | 2020-04-13 01:38:21 +0200 (Mon, 13 Apr 2020) | 6 lines
Changed paths:
M CHANGES.txt
MM cat_spm_results_ui.m
Fixed: Corrected some inconsistencies in cat_spm_results_ui.m.
------------------------------------------------------------------------
r196 | gaser | 2020-04-10 01:30:56 +0200 (Fri, 10 Apr 2020) | 7 lines
Changed paths:
M CHANGES.txt
M cat_spm_results_ui.m
Changed: Added check to cat_spm_results_ui if TFCE is installed (for general
use in CAT12).
------------------------------------------------------------------------
r195 | gaser | 2020-04-10 01:22:07 +0200 (Fri, 10 Apr 2020) | 14 lines
Changed paths:
M CHANGES.txt
M Makefile
A cat_spm_results_ui.m
M html/tfce.html
M spm_TFCE.m
M tfce_list.m
M tfce_results_ui.m
(1) Changed: ARenamed tfce_results_ui.m to cat_spm_results_ui.m and added
functionality from CAT12 result call.
(2) Changed: Corrected internal function names.
------------------------------------------------------------------------
r194 | gaser | 2020-04-09 13:42:16 +0200 (Thu, 09 Apr 2020) | 19 lines
Changed paths:
M CHANGES.txt
M Makefile
M html/images/TFCE.png
M html/images/home.jpg
M html/images/research.jpg
M html/style.css
MM html/tfce.html
M html/tfce.txt
M html/tfce_FN.html
M html/tfce_starting.html
M tfce_estimate_stat.m
M tfce_results_ui.m
(1) Changed: Added option to list more detailed cluster information in
tfce_results_ui.m.
(2) Changed: Corrected internal function name in tfce_estimate_stat.m
(3) Changed: Set server to old dbm-server in Makefile.
------------------------------------------------------------------------
r193 | gaser | 2020-04-09 00:36:57 +0200 (Thu, 09 Apr 2020) | 7 lines
Changed paths:
M CHANGES.txt
M Makefile
M html/tfce.html
Changed: Updated Makefile.
------------------------------------------------------------------------
r192 | gaser | 2020-04-09 00:35:26 +0200 (Thu, 09 Apr 2020) | 19 lines
Changed paths:
M CHANGES.txt
D TFCE.txt
A html
A html/images
A html/images/TFCE.png
A html/images/home.jpg
A html/images/research.jpg
A html/style.css
A html/tfce.html
A html/tfce.txt
A html/tfce_FN.html
A html/tfce_starting.html
MM spm/spm_getSPM.m
MM spm/spm_list.m
MM spm/spm_results_ui.m
Added: Added html help text
------------------------------------------------------------------------
r191 | gaser | 2020-04-09 00:33:33 +0200 (Thu, 09 Apr 2020) | 14 lines
Changed paths:
M CHANGES.txt
M Makefile
M spm_TFCE.m
M tbx_cfg_tfce.m
M tfce_list.m
M tfce_results_ui.m
(1) Changed: Updated Makefile.
(2) Changed: Updated tfce_results_ui.m to implement modifications from
cat_stat_spm_results_ui.m for surface visualization of results.
(3) Changed: Implemented function for displaying only current cluster.
(4) Changed: Updated help text.
------------------------------------------------------------------------
r190 | gaser | 2020-04-08 02:26:29 +0200 (Wed, 08 Apr 2020) | 11 lines
Changed paths:
M CHANGES.txt
M Makefile
R spm
A spm/spm_getSPM.m
A spm/spm_list.m
A spm/spm_results_ui.m
(1) Fixed: Resolved conflict with spm folder.
(2) Fixed: Corrected port of ssh command in makefile.
------------------------------------------------------------------------
r189 | gaser | 2020-04-08 02:19:15 +0200 (Wed, 08 Apr 2020) | 87 lines
Changed paths:
M CHANGES.txt
M Contents_info.txt
M INSTALL_info.txt
M Makefile
M TFCE.txt
D cg_get_tfce_results.m
> moved to tfce_getSPM.m
D cg_progress.m
> moved to tfce_progress.m
D cg_tfce_estimate.m
> moved to tfce_estimate_stat.m
D cg_tfce_list.m
> moved to tfce_list.m
D cg_tfce_results.m
> moved to tfce_results_ui.m
D cg_tfce_surf_max.m
> moved to tfce_surf_max.m
D cg_tfce_update.m
> moved to tfce_update.m
M compile.m
A + old/tfceMex.c
> moved from tfceMex.c
A + old/tfceMex.m
> moved from tfceMex.m
A + old/tfceMex.mexa64
> moved from tfceMex.mexa64
A + old/tfceMex.mexglx
> moved from tfceMex.mexglx
A + old/tfceMex.mexmaci
> moved from tfceMex.mexmaci
A + old/tfceMex.mexmaci64
> moved from tfceMex.mexmaci64
A + old/tfceMex.mexw32
> moved from tfceMex.mexw32
A + old/tfceMex.mexw64
> moved from tfceMex.mexw64
A spm
A spm/spm_getSPM.m
A spm/spm_list.m
A spm/spm_results_ui.m
M spm_TFCE.m
A + tbx_cfg_tfce.m
> moved from tbx_cfg_tfce_estimate.m
D tbx_cfg_tfce_estimate.m
> moved to tbx_cfg_tfce.m
D tfceMex.c
> moved to old/tfceMex.c
D tfceMex.m
> moved to old/tfceMex.m
D tfceMex.mexa64
> moved to old/tfceMex.mexa64
D tfceMex.mexglx
> moved to old/tfceMex.mexglx
D tfceMex.mexmaci
> moved to old/tfceMex.mexmaci
D tfceMex.mexmaci64
> moved to old/tfceMex.mexmaci64
D tfceMex.mexw32
> moved to old/tfceMex.mexw32
D tfceMex.mexw64
> moved to old/tfceMex.mexw64
D tfceMex_noopenmp.mexa64
D tfceMex_noopenmp.mexglx
D tfceMex_noopenmp.mexmaci
D tfceMex_noopenmp.mexmaci64
D tfceMex_noopenmp.mexw32
D tfceMex_noopenmp.mexw64
A + tfce_estimate_stat.m
> moved from cg_tfce_estimate.m
A + tfce_getSPM.m
> moved from cg_get_tfce_results.m
A + tfce_list.m
> moved from cg_tfce_list.m
A + tfce_progress.m
> moved from cg_progress.m
A + tfce_results_ui.m
> moved from cg_tfce_results.m
A + tfce_surf_max.m
> moved from cg_tfce_surf_max.m
A + tfce_update.m
> moved from cg_tfce_update.m
(1) Changed: Renamed all functions to start with "tfce".
(2) Changed: Updated many functions w.r.t. to new functionality in SPM12
result functions.
------------------------------------------------------------------------
r188 | gaser | 2020-02-25 11:44:14 +0100 (Tue, 25 Feb 2020) | 10 lines
Changed paths:
M CHANGES.txt
M Makefile
M cg_tfce_estimate.m
M cg_tfce_update.m
(1) Fixed: Corrected interactive selection of contrasts.
(2) Fixed: Check for empty result masks was not correct.
(3) Changed: IP-address of server changed.
------------------------------------------------------------------------
r187 | gaser | 2020-02-06 16:44:51 +0100 (Thu, 06 Feb 2020) | 14 lines
Changed paths:
M CHANGES.txt
M cg_tfce_estimate.m
M compile.m
M tfceMex_pthread.mexa64
M tfceMex_pthread.mexmaci64
M tfceMex_pthread.mexw64
(1) Fixed: F-test for some contrasts was not correct and ended up with
discrepancy between parametric and non-parametric statistic.
(2) Fixed: Corrected interactive selection of contrasts.
(3) Fixed: Check for empty result masks was not correct.
(4) Changed: Updated compiler flags and recompiled tfceMex_pthread.c
------------------------------------------------------------------------
r186 | gaser | 2019-12-03 10:46:25 +0100 (Tue, 03 Dec 2019) | 8 lines
Changed paths:
M CHANGES.txt
M cg_tfce_estimate.m
(1) Fixed: Tail approximation was not correct for estimating inverse contrasts.
Any other (defined) contrasts were not affected.
(2) Fixed: Design check for interaction designs is now correctly printed.
------------------------------------------------------------------------
r185 | gaser | 2019-11-18 12:01:39 +0100 (Mon, 18 Nov 2019) | 10 lines
Changed paths:
M CHANGES.txt
M cg_tfce_estimate.m
M tfceMex_pthread.mexmaci64
(1) Fixed: Check computation time between multi-threading cto identify
potential issues with multi-threading on some systems (it is not clear where
these longer computation time by a factor of > 10 time come from).
(2) Changed: Maximum statistic is now using a different mask.
------------------------------------------------------------------------
r184 | gaser | 2019-09-19 23:48:18 +0200 (Thu, 19 Sep 2019) | 6 lines
Changed paths:
M CHANGES.txt
M tbx_cfg_tfce_estimate.m
Changed: Updated help text.
------------------------------------------------------------------------
r183 | gaser | 2019-08-14 13:07:22 +0200 (Wed, 14 Aug 2019) | 7 lines