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I think we'll want to upload these to an S3 bucket rather than include them in the Docker -- we're moving in a similar direction for our other pipelines: CCBR/RENEE#89
Description of the bug
Need to include mouse essential genes and nonessential genes to Docker container and add flag for species in run:
https://github.com/CCBR/CRISPRSeq_Screens/blob/master/resources/bagel/CEG_mouse.txt
https://github.com/CCBR/CRISPRSeq_Screens/blob/master/resources/bagel/NEG_mouse.txt
Command used and terminal output
No response
Relevant files
No response
System information
No response
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