From f55905a87cb2a7929d3eead095e6d04c59653078 Mon Sep 17 00:00:00 2001 From: Emilie Delattre Date: Fri, 4 Nov 2022 13:15:47 +0100 Subject: [PATCH 01/12] Test dvc repro with k-fold=10 --- dvc/dvc.lock | 777 +++++++++++++----- .../configs/splitter-stratified-k-fold.yaml | 2 +- 2 files changed, 578 insertions(+), 201 deletions(-) diff --git a/dvc/dvc.lock b/dvc/dvc.lock index 262fe0f..0f6e958 100644 --- a/dvc/dvc.lock +++ b/dvc/dvc.lock @@ -7824,13 +7824,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/janelia-L5-cnn-deepwalk-stratified-k-fold - md5: 76b3341a4c18702a4d88e5c475907b0a.dir - size: 5177957 - nfiles: 13 + md5: 68ef63afec57e7ea25a49d4175411923.dir + size: 14189415 + nfiles: 34 train-janelia-L5@perslay-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-janelia-L5/apical/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -7864,13 +7864,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/janelia-L5-xgb-deepwalk-stratified-k-fold - md5: d0191da414c711fd6f68f17b4b553ff3.dir - size: 26058170 - nfiles: 13 + md5: f64cc0d7a08c48c3b25ac7e6ff991d67.dir + size: 71768257 + nfiles: 34 train-janelia-L5@xgb-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-janelia-L5/apical/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -7884,13 +7884,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/janelia-L5-xgb-tmd-stratified-k-fold - md5: 6e0c71d08ce97991bd8a0ff688317b66.dir - size: 27180142 - nfiles: 13 + md5: 3f73c80644d658dda508a2a2424651a5.dir + size: 74780455 + nfiles: 34 train-janelia-L5@decisiontree-tmd: cmd: morphoclass -v train --dataset-config training/extra-configs/lida-janelia-L5.yaml --model-config training/configs/model-decisiontree-tmd.yaml --splitter-config @@ -11327,13 +11327,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L4-apical-image-deepwalk-decision-tree-stratified-k-fold - md5: 0a8e7371e6d5fddc88e865d54cf92094.dir - size: 35410875 - nfiles: 13 + md5: f80c9968a10668baf5bac7549d492228.dir + size: 97313582 + nfiles: 34 train@in-L5-axon-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/axon/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11647,13 +11647,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L23-axon-graph-rd-gnn-stratified-k-fold - md5: c0bdd158fc4adaba9b3d056d6b8eaae5.dir - size: 10035775 - nfiles: 13 + md5: bf77733e20413b2c3a794f1c712d22d6.dir + size: 27474155 + nfiles: 34 train@pc-L4-apical-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/apical/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11747,13 +11747,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L23-axon-image-deepwalk-decision-tree-stratified-k-fold - md5: a4256c46a4787a859809c5befeff363c.dir - size: 63060832 - nfiles: 13 + md5: 887bb3adeb66676763041b15d3c6bbb2.dir + size: 173335491 + nfiles: 34 train@pc-L5-apical-image-tmd-rd-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L5/apical/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11927,13 +11927,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L1-axon-image-tmd-rd-decision-tree-stratified-k-fold - md5: 9f29c5a41af21bcc182d6769ccb5c01d.dir - size: 42936909 - nfiles: 13 + md5: 373e1551f04c7812eb184ea8443c6ebb.dir + size: 118040558 + nfiles: 34 train@in-L4-axon-image-tmd-rd-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/axon/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12507,13 +12507,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L23-axon-diagram-deepwalk-perslay-stratified-k-fold - md5: 9e117becf2b05377d176ddef90133163.dir - size: 3612731 - nfiles: 13 + md5: 9efd723f7ab03bcfe72b6ffa9eed7903.dir + size: 9829387 + nfiles: 34 train@pc-L6-apical-image-deepwalk-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/apical/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12807,13 +12807,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L23-axon-image-tmd-rd-xgb-stratified-k-fold - md5: 5b436f001f010a0fd53980f8e69f04a6.dir - size: 61618711 - nfiles: 13 + md5: c6587f03a761b6dea5b7be9915991129.dir + size: 169573887 + nfiles: 34 train@pc-L5-apical-graph-rd-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L5/apical/graph-rd --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12827,13 +12827,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L5-apical-graph-rd-gnn-stratified-k-fold - md5: 052c6b0324b23d3f27b9672776522ed7.dir - size: 9968444 - nfiles: 13 + md5: bef45174c8a88ea72f7718fcc645cffe.dir + size: 27345516 + nfiles: 34 train@in-L1-axon-image-tmd-rd-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/axon/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13027,13 +13027,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-basal-image-tmd-rd-xgb-stratified-k-fold - md5: 397b414d93ed6d949d9c292ffe91e488.dir - size: 47011081 - nfiles: 13 + md5: f3dadd740c95b65f3c32e778cadd280b.dir + size: 129502289 + nfiles: 34 train-alt-neurites@pc-L3-all-image-deepwalk-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L3/all/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14047,13 +14047,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L2-basal-image-tmd-proj-cnn-stratified-k-fold - md5: 49d2f1cedfaf7a437e2255774651892d.dir - size: 4674720 - nfiles: 13 + md5: efe0b8edade01c75cd005434994f9b90.dir + size: 12831861 + nfiles: 34 train-alt-neurites@pc-L6-all-image-tmd-proj-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/all/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14307,13 +14307,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-all-graph-rd-gnn-stratified-k-fold - md5: 18fef357eb89f85a631c265ee582257c.dir - size: 9151605 - nfiles: 13 + md5: e32240a37d8fa662ad18faccf0280e8f.dir + size: 25126706 + nfiles: 34 train-alt-neurites@in-L23-all-image-tmd-rd-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/all/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14667,13 +14667,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L3-axon-image-tmd-rd-xgb-stratified-k-fold - md5: 29031e05fcffe65cad751437d7e3fd8a.dir - size: 20800623 - nfiles: 13 + md5: 224c4bcaee2f426627b5ee3d5b942190.dir + size: 57191930 + nfiles: 34 train-alt-neurites@pc-L3-axon-image-deepwalk-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L3/axon/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14727,13 +14727,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L5-axon-image-deepwalk-cnn-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L23-basal-image-deepwalk-xgb-stratified-k-fold - md5: f9d24e6cb30282b16bd255a7e2bf7e90.dir - size: 66021789 - nfiles: 13 + md5: 241d41f0ddecacf766a6315e1fd3374d.dir + size: 181812399 + nfiles: 34 train-alt-neurites@pc-L2-axon-image-tmd-proj-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/axon/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15487,13 +15487,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L6-all-diagram-tmd-proj-perslay-stratified-k-fold - md5: cb09deb68d0c37c2cbff20fb6da99f67.dir - size: 3544369 - nfiles: 13 + md5: 9d704651522c60e9b4041b1fd88b4566.dir + size: 9639958 + nfiles: 34 train-alt-neurites@pc-L2-all-image-tmd-proj-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/all/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15627,13 +15627,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-all-diagram-tmd-rd-perslay-stratified-k-fold - md5: 3b90e515914296ac49852e3f5d48b931.dir - size: 3527969 - nfiles: 13 + md5: af460592d402ecac744342d9c9e8d2bb.dir + size: 9613081 + nfiles: 34 train-alt-neurites@in-L5-all-image-deepwalk-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/all/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15927,13 +15927,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L3-all-image-deepwalk-xgb-stratified-k-fold - md5: 57fa4ed45b51ce2f2e382ef0780cf398.dir - size: 21286687 - nfiles: 13 + md5: 12fdd16c3f93c0b9679d62dbfde21fb0.dir + size: 58464384 + nfiles: 34 train-alt-neurites@pc-L6-all-image-tmd-proj-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/all/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15947,13 +15947,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L6-all-image-tmd-proj-xgb-stratified-k-fold - md5: ea8dbadacc6c1e7aa99a691b6a960c50.dir - size: 53162939 - nfiles: 13 + md5: f228e69605d283a3c0f86504dc5df8ca.dir + size: 146315847 + nfiles: 34 train-alt-neurites@in-L6-basal-image-tmd-rd-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/basal/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15967,13 +15967,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-basal-image-tmd-rd-decision-tree-stratified-k-fold - md5: 4c70c28557b011b45eecf672db355dac.dir - size: 27002488 - nfiles: 13 + md5: 2e5818adadeb7ba1d7440637a140d21c.dir + size: 74241337 + nfiles: 34 train-alt-neurites@in-L1-basal-image-deepwalk-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/basal/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16167,13 +16167,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-all-image-tmd-rd-decision-tree-stratified-k-fold - md5: e15736f0715007b14a077efbdd5d23d7.dir - size: 42672382 - nfiles: 13 + md5: 8af1ffbb9fa2faaa0c54026fb694f71c.dir + size: 117282671 + nfiles: 34 train-alt-neurites@pc-L4-all-image-tmd-rd-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/all/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16607,13 +16607,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L5-axon-image-deepwalk-xgb-stratified-k-fold - md5: ab4bd396b1ece3dba74b0f9a9bfd70c8.dir - size: 64467732 - nfiles: 13 + md5: d5c2fe4998f97c787d3f170ca1efd56e.dir + size: 177490769 + nfiles: 34 train-alt-neurites@pc-L6-all-image-deepwalk-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/all/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16647,13 +16647,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L2-axon-image-deepwalk-decision-tree-stratified-k-fold - md5: f3de01f0d5eb69042357931269e05163.dir - size: 18731315 - nfiles: 13 + md5: 1a51969790d389c50abab234896366e1.dir + size: 51446626 + nfiles: 34 train-alt-neurites@pc-L5-axon-image-tmd-rd-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L5/axon/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16827,13 +16827,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L5-all-image-deepwalk-cnn-stratified-k-fold - md5: 95781b47f1d7f951983891bff7ed58ea.dir - size: 8276116 - nfiles: 13 + md5: d088a335e7a5890651737b8825ec2d4d.dir + size: 22665139 + nfiles: 34 train-alt-neurites@pc-L3-all-image-tmd-rd-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L3/all/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16907,13 +16907,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L4-axon-image-tmd-rd-cnn-stratified-k-fold - md5: 5d7cc0cf0fe10b51cff5448c36591a28.dir - size: 6065866 - nfiles: 13 + md5: b54b22c91726e5c116187bd5d9a36680.dir + size: 16663690 + nfiles: 34 train-alt-neurites@pc-L6-all-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/all/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -17107,13 +17107,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-all-diagram-tmd-rd-perslay-stratified-k-fold - md5: c910f661ac470bec8f49ea8e65ed24db.dir - size: 3432234 - nfiles: 13 + md5: 71749c47f2ab13a34e15a3d5830a52a9.dir + size: 9381793 + nfiles: 34 train-alt-neurites@pc-L5-basal-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L5/basal/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -17347,13 +17347,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-gnn-morphology-stratified-k-fold - md5: d67bfa3dedea53084f2e6f539b56aa24.dir - size: 12238989 - nfiles: 13 + md5: 8db80729a315d8cc7fda91d9bb9271d8.dir + size: 33531722 + nfiles: 34 train-lida-in-merged-bc-merged-all@decision-tree-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/all/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -17867,13 +17867,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/janelia-L5-all-perslay-tmd-stratified-k-fold - md5: fa1fde750b1cd305c92ba3279834c38e.dir - size: 3420998 - nfiles: 13 + md5: 801a79075560d9b7289c5982320a2c47.dir + size: 9339383 + nfiles: 34 train-janelia-L5-axon@perslay-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-janelia-L5/axon/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -18047,13 +18047,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/janelia-L5-axon-perslay-tmd-stratified-k-fold - md5: 083602d2902e360e67a08fa591393299.dir - size: 3421004 - nfiles: 13 + md5: 5c079e4e525259adb35a2ce8257a4bff.dir + size: 9339323 + nfiles: 34 train-janelia-L5-all@xgb-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-janelia-L5/all/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -18327,13 +18327,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-all-xgb-tmd-stratified-k-fold - md5: 37d435a81214d9caf2b17fc918fc2382.dir - size: 156376816 - nfiles: 13 + md5: 099833326b732f8caea37e089986f037.dir + size: 430377529 + nfiles: 34 train-lida-in-merged-basal@xgb-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/basal/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20661,13 +20661,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L5-basal-image-deepwalk-xgb-stratified-k-fold - md5: d9b0fadc7f857170bacd7cc23c9f29f7.dir - size: 48853750 - nfiles: 13 + md5: ac3795c6c828bd58ae9afed2fcca3a16.dir + size: 134493328 + nfiles: 34 train-alt-neurites@in-L5-basal-image-tmd-rd-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/basal/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20781,13 +20781,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L5-basal-image-tmd-proj-xgb-stratified-k-fold - md5: 150cd6ec1334fbe7fc1968c8739fda47.dir - size: 45024316 - nfiles: 13 + md5: 72ca9d27256cdba7df2a93506effccca.dir + size: 123997751 + nfiles: 34 train-alt-neurites@in-L1-all-diagram-tmd-proj-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/all/diagram-tmd-proj --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20961,13 +20961,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-basal-image-tmd-proj-decision-tree-stratified-k-fold - md5: 56daca4fc8110e2cf504a56ca66c5ec6.dir - size: 42587416 - nfiles: 13 + md5: 9a621c3abc9f63808d25a47363f8a321.dir + size: 117072065 + nfiles: 34 train-alt-neurites@in-L1-basal-image-tmd-proj-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/basal/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21321,13 +21321,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-basal-graph-proj-gnn-stratified-k-fold - md5: 8492c54c116eaf49a26bb9448b3e2da3.dir - size: 9636314 - nfiles: 13 + md5: b8fe461fd358ad62adf049a353fa8142.dir + size: 26432490 + nfiles: 34 train-alt-neurites@in-L4-basal-image-tmd-proj-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/basal/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21381,13 +21381,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-basal-image-tmd-proj-xgb-stratified-k-fold - md5: d72b8940d625bd3db34c619d4d2633a0.dir - size: 46585483 - nfiles: 13 + md5: 15cb4a859e9ca4d04fa74507d1c3cd9c.dir + size: 128311512 + nfiles: 34 train-alt-neurites@in-L5-all-diagram-tmd-proj-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/all/diagram-tmd-proj --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21941,13 +21941,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-gnn-morphology-proj-stratified-k-fold - md5: 4bda7a9ba9ff869d97eee29122b32b77.dir - size: 12236371 - nfiles: 13 + md5: 9b7d86da1cc9956336e5d0ae7d5a044a.dir + size: 33515336 + nfiles: 34 train-lida-in-merged-bc-merged-all-proj@perslay-tmd-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/all/diagram-tmd-proj --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -22041,13 +22041,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-gnn-morphology-proj-stratified-k-fold - md5: 049368d6fed70a4ffab488a9a6ac8cc1.dir - size: 12233502 - nfiles: 13 + md5: eb1b07795c0d0cd2e2566291d869e1a9.dir + size: 33501101 + nfiles: 34 train-lida-in-merged-bc-merged-basal-proj@perslay-tmd-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/basal/diagram-tmd-proj --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -22081,13 +22081,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-xgb-tmd-proj-stratified-k-fold - md5: ed7b7a1cc2523221df58bcb44fbc170e.dir - size: 152305730 - nfiles: 13 + md5: ddb39f3fa3b06cb15058502aa61c3044.dir + size: 419225962 + nfiles: 34 plot-dataset-stats@pyramidal-cells: cmd: "morphoclass -v plot-dataset-stats --input-csv-path data/preprocessed-pyramidal-cells.csv\ \ --output-report-path reports/plot-dataset-stats/pyramidal-cells.html\n" @@ -22121,3 +22121,380 @@ stages: md5: b670dc26e797a448a6ff173734082290.dir size: 1307981493 nfiles: 183 + evaluate@in-L23-axon-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L23-axon-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L23-axon-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L23-axon-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: 3c712c3617bb8102b10d435121b31ef4 + size: 18402829 + outs: + - path: evaluation/in-L23-axon-graph-rd-gnn-stratified-k-fold + md5: 80c0b7c61eda7297241b08ffc34b0d22.dir + size: 9071486 + nfiles: 33 + - path: evaluation/in-L23-axon-graph-rd-gnn-stratified-k-fold.html + md5: c1d2ad531ed78c1c77eb3150f28f617f + size: 13268 + evaluate-lida-in-merged-bc-merged-basal@gnn-morphology: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-gnn-morphology-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-gnn-morphology-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-gnn-morphology-stratified-k-fold/checkpoint.chk + md5: 1c7046a2cb6974a4b240ff1797c65cc0 + size: 24508363 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-gnn-morphology-stratified-k-fold + md5: c96a34a0249da7a4f66023ca196135c7.dir + size: 9023519 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-gnn-morphology-stratified-k-fold.html + md5: 97eeeb1e9a994d8c4bfb3735adcf29d3 + size: 11715 + evaluate-alt-neurites@in-L4-basal-image-tmd-proj-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-basal-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L4-basal-image-tmd-proj-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-basal-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + md5: 807879d5d3da775836e628d52c210bb8 + size: 119294639 + outs: + - path: evaluation/in-L4-basal-image-tmd-proj-xgb-stratified-k-fold + md5: 8e4f832bc673bab8a82e0ee7a14be846.dir + size: 9017033 + nfiles: 33 + - path: evaluation/in-L4-basal-image-tmd-proj-xgb-stratified-k-fold.html + md5: 013b2a1b5b7c6e55709cc88f7ab3482b + size: 13257 + evaluate-alt-neurites@pc-L5-axon-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-axon-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-axon-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-axon-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: 4ac067f9eed2f6cebf62c122cb2fc6e5 + size: 168533423 + outs: + - path: evaluation/pc-L5-axon-image-deepwalk-xgb-stratified-k-fold + md5: d8c2da4470b650f76c8a3fc8feaadbe0.dir + size: 8957506 + nfiles: 33 + - path: evaluation/pc-L5-axon-image-deepwalk-xgb-stratified-k-fold.html + md5: 74053613f92d92461e8c3be342307313 + size: 10868 + evaluate-alt-neurites@in-L1-basal-image-tmd-proj-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-basal-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L1-basal-image-tmd-proj-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-basal-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + md5: 356c79ab13a1d7ef392cbc4f5d50866b + size: 108085615 + outs: + - path: evaluation/in-L1-basal-image-tmd-proj-decision-tree-stratified-k-fold + md5: 05458c1eb0144951efc5663bdf9edbb9.dir + size: 8986610 + nfiles: 33 + - path: evaluation/in-L1-basal-image-tmd-proj-decision-tree-stratified-k-fold.html + md5: 57308d0abf4ae27972776897c05e8664 + size: 12120 + evaluate-lida-in-merged-all@xgb-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-all-xgb-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-all-xgb-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-all-xgb-tmd-stratified-k-fold/checkpoint.chk + md5: 0e1881361d67861b91f940005608cfa8 + size: 421373359 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-xgb-tmd-stratified-k-fold + md5: e29e6988cc1cb415121502a7d6af8a52.dir + size: 9004330 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-xgb-tmd-stratified-k-fold.html + md5: 1791d685acb3d6cf78f573ad4be90c18 + size: 12565 + evaluate-lida-in-merged-bc-merged-basal-proj@xgb-tmd-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-xgb-tmd-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-xgb-tmd-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-xgb-tmd-proj-stratified-k-fold/checkpoint.chk + md5: 91e222b04ec2247d4c025345b3d07b84 + size: 410242671 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-xgb-tmd-proj-stratified-k-fold + md5: a529ef41f8655164960a7ce935f44fad.dir + size: 8983451 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-xgb-tmd-proj-stratified-k-fold.html + md5: 6445d4d077499071415153cc86d343bd + size: 11595 + evaluate-alt-neurites@in-L4-all-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-all-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L4-all-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-all-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: cacad91b3534aef4cbe8498be84b74c6 + size: 600372 + outs: + - 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path: training/checkpoints-alt-neurites/pc-L4-axon-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: 49bdb8e6211ae1bbf5e9eb4e66902f30 + size: 7735470 + outs: + - path: evaluation/pc-L4-axon-image-tmd-rd-cnn-stratified-k-fold + md5: 895c8efdc94a57c0ac7e8556b94033f9.dir + size: 8928380 + nfiles: 33 + - path: evaluation/pc-L4-axon-image-tmd-rd-cnn-stratified-k-fold.html + md5: a059a6b39066ab6330af5b01846240cd + size: 10256 + evaluate-alt-neurites@pc-L5-all-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-all-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-all-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-all-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: 49a13f726b57d490560749693d62a5f4 + size: 13721452 + outs: + - path: evaluation/pc-L5-all-image-deepwalk-cnn-stratified-k-fold + md5: 0dc4f77416b52b22c3b2d286c6fccc05.dir + size: 8943847 + nfiles: 33 + - path: evaluation/pc-L5-all-image-deepwalk-cnn-stratified-k-fold.html + md5: 8d2919f4a4d5285f686bde15f54f8623 + size: 10863 + evaluate-alt-neurites@in-L5-basal-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-basal-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L5-basal-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-basal-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: 2966a31611ba3bdcfc7e5463511359e0 + size: 125468207 + outs: + - path: evaluation/in-L5-basal-image-deepwalk-xgb-stratified-k-fold + md5: f56810f782306d2d68ff9a0d5c031882.dir + size: 9025281 + nfiles: 33 + - path: evaluation/in-L5-basal-image-deepwalk-xgb-stratified-k-fold.html + md5: 78090210cd2f982c50f68018390fbd9c + size: 13257 + evaluate-alt-neurites@pc-L2-axon-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-axon-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-axon-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-axon-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 2754dcdd331e7f61ca5fb4d54fb2e723 + size: 42532591 + outs: + - path: evaluation/pc-L2-axon-image-deepwalk-decision-tree-stratified-k-fold + md5: aec5d05b08636d2e13e16482fab1fbb1.dir + size: 8914195 + nfiles: 33 + - path: evaluation/pc-L2-axon-image-deepwalk-decision-tree-stratified-k-fold.html + md5: e4e1379579027911a67dee7b2eaf20a7 + size: 10325 + evaluate-alt-neurites@in-L1-all-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-all-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L1-all-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-all-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: 879cd7991c091aedfb16710d3b040af5 + size: 108290671 + outs: + - path: evaluation/in-L1-all-image-tmd-rd-decision-tree-stratified-k-fold + md5: 7d404e097e495e96e0b29e9f79b3716c.dir + size: 8992160 + nfiles: 33 + - path: evaluation/in-L1-all-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: 959afcf946e2a091f93a3b86b14e184b + size: 12068 + evaluate-alt-neurites@pc-L5-axon-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-axon-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-axon-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-axon-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: 960e1887dff5cdc85e57a0a8b3b089ca + size: 13721202 + outs: + - path: evaluation/pc-L5-axon-image-deepwalk-cnn-stratified-k-fold + md5: 3ed5f1d86f9158d2b022d682d85b57f6.dir + size: 8952184 + nfiles: 33 + - path: evaluation/pc-L5-axon-image-deepwalk-cnn-stratified-k-fold.html + md5: 29907e3a1dac2d705b5ab32b5eb56306 + size: 10876 + evaluate-alt-neurites@in-L5-basal-image-tmd-proj-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-basal-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L5-basal-image-tmd-proj-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-basal-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + md5: 0f9d24769e3a95dd5602f31d9184e916 + size: 114972655 + outs: + - path: evaluation/in-L5-basal-image-tmd-proj-xgb-stratified-k-fold + md5: a60f62110a9d83c59de60cc006c15625.dir + size: 9025256 + nfiles: 33 + - path: evaluation/in-L5-basal-image-tmd-proj-xgb-stratified-k-fold.html + md5: 7867718f61c4da7a3733b322e245c346 + size: 13257 + evaluate-alt-neurites@in-L6-all-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-all-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L6-all-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-all-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: 11f8bd00d0e3dc59c573b1188bbfbcac + size: 16149657 + outs: + - path: evaluation/in-L6-all-graph-rd-gnn-stratified-k-fold + md5: 137a8f15ad3de13a4fdc94bc241c5107.dir + size: 8977209 + nfiles: 33 + - path: evaluation/in-L6-all-graph-rd-gnn-stratified-k-fold.html + md5: 524db362b7431e4f93ffd3e9471f1fde + size: 11473 + evaluate-janelia-L5@cnn-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/janelia-L5-cnn-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/janelia-L5/cnn-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/janelia-L5-cnn-deepwalk-stratified-k-fold + md5: 68ef63afec57e7ea25a49d4175411923.dir + size: 14189415 + nfiles: 34 + outs: + - path: evaluation/janelia-L5/cnn-deepwalk-stratified-k-fold + md5: a9a34ee42f82e8c8e3d400ade9eab242.dir + size: 8945684 + nfiles: 33 + - path: evaluation/janelia-L5/cnn-deepwalk-stratified-k-fold.html + md5: ab654c64b191aecbe97916d41252b369 + size: 10687 + evaluate-alt-neurites@in-L6-basal-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-basal-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L6-basal-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-basal-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: 765b00241f50dd90527d0d40284f05ba + size: 65269359 + outs: + - path: evaluation/in-L6-basal-image-tmd-rd-decision-tree-stratified-k-fold + md5: 7310fc97bee5f828324d7d5524353a72.dir + size: 8972138 + nfiles: 33 + - path: evaluation/in-L6-basal-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: b4f5646d680926812ef53d7391b4879b + size: 11500 + evaluate-alt-neurites@pc-L3-axon-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-axon-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-axon-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-axon-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: 27f06a9069becd92276f1250b2a93f79 + size: 48291631 + outs: + - path: evaluation/pc-L3-axon-image-tmd-rd-xgb-stratified-k-fold + md5: 05d8c273666eff3dc7af8190533442a0.dir + size: 8900459 + nfiles: 33 + - path: evaluation/pc-L3-axon-image-tmd-rd-xgb-stratified-k-fold.html + md5: a6b0d4ac680f020172d4a9ba8b3409fc + size: 9654 + evaluate-lida-in-merged-bc-merged-basal-proj@gnn-morphology-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-gnn-morphology-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-gnn-morphology-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-gnn-morphology-proj-stratified-k-fold/checkpoint.chk + md5: 87b4acb35ad6d40399d8291dc950bdf1 + size: 24508299 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-gnn-morphology-proj-stratified-k-fold + md5: 78d88ecb1274cadd1904dc3d106f55da.dir + size: 8992962 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-gnn-morphology-proj-stratified-k-fold.html + md5: 2a608d2360be5e69abb146e7c1f5395a + size: 11777 + evaluate-janelia-L5-all@perslay-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-all-perslay-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-perslay-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-all-perslay-tmd-stratified-k-fold/checkpoint.chk + md5: 027f2b6a9852d384ef9636411ce5464d + size: 396216 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-perslay-tmd-stratified-k-fold + md5: b0d701846e97338f1601ec41e592678e.dir + size: 8943327 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-perslay-tmd-stratified-k-fold.html + md5: 01d40baa3fb6520711b55ace01a03f93 + size: 10881 + evaluate-janelia-L5@xgb-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/janelia-L5-xgb-tmd-stratified-k-fold/checkpoint.chk + evaluation/janelia-L5/xgb-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/janelia-L5-xgb-tmd-stratified-k-fold + md5: 3f73c80644d658dda508a2a2424651a5.dir + size: 74780455 + nfiles: 34 + outs: + - path: evaluation/janelia-L5/xgb-tmd-stratified-k-fold + md5: ff42fda39bc6a187760e18ead9640a2d.dir + size: 8940248 + nfiles: 33 + - path: evaluation/janelia-L5/xgb-tmd-stratified-k-fold.html + md5: 68e0e9454d874d163ed28e99689af49d + size: 10617 + evaluate-alt-neurites@pc-L2-basal-image-tmd-proj-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-basal-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-basal-image-tmd-proj-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-basal-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + md5: 6d1a6682f4ea47ae79bacc950c7e4ed6 + size: 3913332 + outs: + - path: evaluation/pc-L2-basal-image-tmd-proj-cnn-stratified-k-fold + md5: a73e6bb2842003c713cebd5d6fe73c0d.dir + size: 8918689 + nfiles: 33 + - path: evaluation/pc-L2-basal-image-tmd-proj-cnn-stratified-k-fold.html + md5: 528245a70d710035a6237bb7b2db49e1 + size: 10295 + evaluate-alt-neurites@pc-L2-axon-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-axon-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-axon-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-axon-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: 012994da8ecbeba1e790e7ebf763685a + size: 335283 + outs: + - path: evaluation/pc-L2-axon-diagram-deepwalk-perslay-stratified-k-fold + md5: d2b849be1593e3688c05edc423ae9904.dir + size: 8921626 + nfiles: 33 + - path: evaluation/pc-L2-axon-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 45863a9312538055d955f7992c745c9d + size: 10383 diff --git a/dvc/training/configs/splitter-stratified-k-fold.yaml b/dvc/training/configs/splitter-stratified-k-fold.yaml index 939a9ea..7c0ae14 100644 --- a/dvc/training/configs/splitter-stratified-k-fold.yaml +++ b/dvc/training/configs/splitter-stratified-k-fold.yaml @@ -1,3 +1,3 @@ splitter_class: sklearn.model_selection.StratifiedKFold splitter_params: - n_splits: 3 + n_splits: 10 From 22a15ab39b9764c1cbd27f9135ef0e449024ba79 Mon Sep 17 00:00:00 2001 From: Emilie Delattre Date: Mon, 7 Nov 2022 09:13:11 +0100 Subject: [PATCH 02/12] New update --- dvc/dvc.lock | 5726 +++++++++++++++++++++++++++++++++++++------------- 1 file changed, 4221 insertions(+), 1505 deletions(-) diff --git a/dvc/dvc.lock b/dvc/dvc.lock index 0f6e958..cab5285 100644 --- a/dvc/dvc.lock +++ b/dvc/dvc.lock @@ -7129,13 +7129,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-cnn-deepwalk-stratified-k-fold - md5: faa6933c440da60bc9787c0da7d2c005.dir - size: 16404680 - nfiles: 13 + md5: ca9bc139c2955717f5d7f26bd78f2cba.dir + size: 44857543 + nfiles: 34 train-lida-in-merged-bc-merged@decisiontree-tmd: cmd: morphoclass -v train --dataset-config training/extra-configs/lida-in-merged-bc-merged.yaml --model-config training/configs/model-decisiontree-tmd.yaml --splitter-config @@ -7307,13 +7307,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-gnn-morphology-stratified-k-fold - md5: de73f4f7a35f6945e93b190114d29437.dir - size: 12293521 - nfiles: 13 + md5: 72d67534aeff9a4cf0c5b094492d1c3d.dir + size: 33589424 + nfiles: 34 train-lida-in-merged-bc-merged@perslay-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/axon/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -7347,13 +7347,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-bc-merged-xgb-tmd-stratified-k-fold - md5: 4e59fc8af1e484a9a9bfaf7ce2ab7468.dir - size: 156153076 - nfiles: 13 + md5: 9ca848932c35dc84117217c0ada6a9e2.dir + size: 429686154 + nfiles: 34 train-lida-in-merged@perslay-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/axon/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -7367,13 +7367,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-perslay-deepwalk-stratified-k-fold - md5: 3a06be80e6c6bb5ff620709f61171872.dir - size: 3964134 - nfiles: 13 + md5: 52e1cca10f9f1cdc9ce63b0b3b19c843.dir + size: 10680879 + nfiles: 34 train-lida-in-merged@cnn-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/axon/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -7387,13 +7387,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-cnn-tmd-stratified-k-fold - md5: 57a03a39380aa10c977423ea4a1120c2.dir - size: 16396954 - nfiles: 13 + md5: f7e166783df231726a96cbd9ea811d59.dir + size: 44853341 + nfiles: 34 train-lida-in-merged@xgb-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/axon/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -7407,13 +7407,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-xgb-deepwalk-stratified-k-fold - md5: b8be049f947329a03d0bbceb412d0d7c.dir - size: 167878448 - nfiles: 13 + md5: da51bebdf7b9423fea5f34bbee800a22.dir + size: 462272168 + nfiles: 34 train-lida-in-merged@xgb-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/axon/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -7473,13 +7473,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-bc-merged-xgb-deepwalk-stratified-k-fold - md5: ed8c71a958df70697e1fb0a6c72dbc37.dir - size: 167032542 - nfiles: 13 + md5: 8c998be1327a9dbeabe6d873b71b88e5.dir + size: 459778452 + nfiles: 34 train-lida-in-merged-bc-merged@perslay-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/axon/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -7956,13 +7956,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/janelia-L5-perslay-deepwalk-stratified-k-fold - md5: 3d91fb22878647526291e8f59e3a82ad.dir - size: 3417083 - nfiles: 13 + md5: 84188477339ee87fb5af7a9659d49f98.dir + size: 9339193 + nfiles: 34 train-janelia-L5@cnn-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-janelia-L5/apical/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -7996,13 +7996,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/janelia-L5-gnn-morphology-stratified-k-fold - md5: 42fef99ff85851de48fb3329bed0153c.dir - size: 9099697 - nfiles: 13 + md5: fa46e7616c1697fba39f8340df0627a6.dir + size: 24975377 + nfiles: 34 features-pc-L2-image-deepwalk-basal: cmd: morphoclass -v extract-features data/final/pyramidal-cells/L2/dataset.csv basal image-deepwalk extract-features/pc-L2/basal/image-deepwalk @@ -11087,13 +11087,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L6-apical-diagram-tmd-proj-perslay-stratified-k-fold - md5: 60e95a5adde2cb7a16e4ed898c7ce095.dir - size: 3551285 - nfiles: 13 + md5: be9a194651a0cd95cb91dbe391e928c0.dir + size: 9634844 + nfiles: 34 train@in-L5-axon-image-tmd-rd-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/axon/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11127,13 +11127,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L3-apical-diagram-tmd-rd-perslay-stratified-k-fold - md5: 215deecfac9f532a19a7ed31b2761b8d.dir - size: 3385587 - nfiles: 13 + md5: 801c19989e8e4b4bd5c31531c374d12a.dir + size: 9245598 + nfiles: 34 train@in-L23-axon-image-deepwalk-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/axon/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11167,13 +11167,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L5-apical-diagram-deepwalk-perslay-stratified-k-fold - md5: fa4da3d6ba911a59a27e3f11af2e280d.dir - size: 3540488 - nfiles: 13 + md5: c31dffff05fcb574c91012033dfa99a7.dir + size: 9682025 + nfiles: 34 train@pc-L4-apical-image-tmd-rd-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/apical/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11187,13 +11187,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L4-apical-image-tmd-rd-cnn-stratified-k-fold - md5: 769cd6ca81070aa90e6a14ea7fa62143.dir - size: 6081907 - nfiles: 13 + md5: ce99988c955a7bae3f59cf7ff8559a5c.dir + size: 16646356 + nfiles: 34 train@pc-L6-apical-image-deepwalk-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/apical/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11207,13 +11207,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L6-apical-image-deepwalk-cnn-stratified-k-fold - md5: 064b406aab923e02a9b7918a194757c7.dir - size: 7409152 - nfiles: 13 + md5: 20afca6c3a218852bb12257db2e21d48.dir + size: 20314426 + nfiles: 34 train@in-L4-axon-image-tmd-rd-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/axon/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11227,13 +11227,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L4-axon-image-tmd-rd-xgb-stratified-k-fold - md5: 74fc459795bb5aeb0c1eeb32c5e39164.dir - size: 45924355 - nfiles: 13 + md5: 4490439658b2be43c6d60cd649f10b1a.dir + size: 126384546 + nfiles: 34 train@pc-L3-apical-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L3/apical/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11247,13 +11247,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L3-apical-image-deepwalk-decision-tree-stratified-k-fold - md5: 176a33d3a668ecb797068ce95f1c8393.dir - size: 19601791 - nfiles: 13 + md5: cb7794353db84b3f3da7a6eaa2e96a69.dir + size: 53846868 + nfiles: 34 train@pc-L6-apical-image-tmd-proj-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/apical/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11347,13 +11347,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L5-axon-image-deepwalk-decision-tree-stratified-k-fold - md5: f70c7208f5a9c84431e45f9b6d2eaa84.dir - size: 45766303 - nfiles: 13 + md5: b80895cbe1f949622de9fd71e18686d9.dir + size: 125827027 + nfiles: 34 train@pc-L2-apical-image-tmd-proj-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/apical/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11367,13 +11367,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L2-apical-image-tmd-proj-decision-tree-stratified-k-fold - md5: fedb9c8f4c0ba3133dd9d8f71fe52c50.dir - size: 20445870 - nfiles: 13 + md5: 863fdde37837fd09927d292e7e0af19f.dir + size: 56187508 + nfiles: 34 train@pc-L4-apical-image-tmd-rd-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/apical/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11387,13 +11387,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L4-apical-image-tmd-rd-decision-tree-stratified-k-fold - md5: 5fdf8650c0118f09a8d394444a6f90d1.dir - size: 38034828 - nfiles: 13 + md5: 6856116278506580473733fd1d0085b8.dir + size: 104536856 + nfiles: 34 train@pc-L4-apical-image-deepwalk-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/apical/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11427,13 +11427,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L2-apical-image-deepwalk-cnn-stratified-k-fold - md5: d10dd493410c080a953d4edca589574c.dir - size: 4680933 - nfiles: 13 + md5: 80c73d888b80f3b219df6db6f880afcb.dir + size: 12831468 + nfiles: 34 train@pc-L3-apical-image-tmd-rd-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L3/apical/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11447,13 +11447,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L3-apical-image-tmd-rd-xgb-stratified-k-fold - md5: a3622acbd9183d3e2601dbc859e738a4.dir - size: 21596263 - nfiles: 13 + md5: c71760f00aabdf3f537b7e200640bdb9.dir + size: 59345212 + nfiles: 34 train@in-L6-axon-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/axon/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11467,13 +11467,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L6-axon-diagram-deepwalk-perslay-stratified-k-fold - md5: 6304b5fee810c2a3e850c5cb8038ec3e.dir - size: 3432180 - nfiles: 13 + md5: 601fa581f3e395381b285df848a4996a.dir + size: 9382165 + nfiles: 34 train@pc-L4-apical-image-tmd-rd-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/apical/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11487,13 +11487,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L4-apical-image-tmd-rd-xgb-stratified-k-fold - md5: a8cfa0263eb07731465c86da953d03a5.dir - size: 38702617 - nfiles: 13 + md5: d8b6316908210c4f7a5e4e320f6eecd6.dir + size: 106524256 + nfiles: 34 train@in-L6-axon-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/axon/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11507,13 +11507,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L6-axon-image-deepwalk-decision-tree-stratified-k-fold - md5: 04f88aa02984340b6d8abfccbe7fee6e.dir - size: 27051745 - nfiles: 13 + md5: 0fe9e55cf2a44273cfbc4431ad85dbcf.dir + size: 74355855 + nfiles: 34 train@in-L5-axon-graph-rd-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/axon/graph-rd --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11527,13 +11527,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L5-axon-graph-rd-gnn-stratified-k-fold - md5: e051db89223045dbd6d2b043a5da1eb1.dir - size: 9636211 - nfiles: 13 + md5: 0c99cc5850e8b8dc6033c4e5013d287f.dir + size: 26381639 + nfiles: 34 train@pc-L5-apical-image-deepwalk-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L5/apical/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11547,13 +11547,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L5-apical-image-deepwalk-cnn-stratified-k-fold - md5: d722aeb46b35e3d3661e3608dc40c6a3.dir - size: 8269204 - nfiles: 13 + md5: 6dbe45194b31370a52124beb89f779d0.dir + size: 22668495 + nfiles: 34 train@pc-L6-apical-image-tmd-proj-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/apical/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11587,13 +11587,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L1-axon-image-deepwalk-xgb-stratified-k-fold - md5: 43e0461deef511e62351e8278eccfa46.dir - size: 44790752 - nfiles: 13 + md5: d184a0600027dc9722f90f5bf8661b6a.dir + size: 123368413 + nfiles: 34 train@pc-L2-apical-diagram-tmd-proj-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/apical/diagram-tmd-proj --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11607,13 +11607,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L2-apical-diagram-tmd-proj-perslay-stratified-k-fold - md5: 13890e1c2641bed98fa26ac3a5ca8e91.dir - size: 3397425 - nfiles: 13 + md5: eaa3fc87171d0ce1a94405de70664395.dir + size: 9265438 + nfiles: 34 train@in-L23-axon-diagram-tmd-rd-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/axon/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11667,13 +11667,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L4-apical-diagram-deepwalk-perslay-stratified-k-fold - md5: 80c29915d3a75594fa19b72a9fb1a7ce.dir - size: 3458874 - nfiles: 13 + md5: 525506b5a8f13a3d4e5ff7b5275b8c1a.dir + size: 9413916 + nfiles: 34 train@in-L5-axon-image-deepwalk-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/axon/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11727,13 +11727,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L3-apical-image-deepwalk-cnn-stratified-k-fold - md5: f27f8784440d7320439067ee44a06477.dir - size: 4678330 - nfiles: 13 + md5: 674c38afb59d330d9ce245aca8e7e039.dir + size: 12814870 + nfiles: 34 train@in-L23-axon-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/axon/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11767,13 +11767,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L5-apical-image-tmd-rd-cnn-stratified-k-fold - md5: 294cd056f14fb636f5ed095afc4471c9.dir - size: 8267014 - nfiles: 13 + md5: 433e26616b2a5160a9312b6a7350a070.dir + size: 22672014 + nfiles: 34 train@in-L6-axon-diagram-tmd-rd-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/axon/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11847,13 +11847,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L2-apical-image-tmd-proj-cnn-stratified-k-fold - md5: c4b5d328f85cc94148c877906162f686.dir - size: 4695631 - nfiles: 13 + md5: e7f32689513f46b0926a54b727a1428e.dir + size: 12836713 + nfiles: 34 train@pc-L4-apical-graph-rd-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/apical/graph-rd --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11887,13 +11887,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L5-apical-image-deepwalk-decision-tree-stratified-k-fold - md5: 869f39643da438df288b7b119995a15a.dir - size: 63291718 - nfiles: 13 + md5: 5c65c5e93d89679c7b96cca7a289214b.dir + size: 173975948 + nfiles: 34 train@pc-L5-apical-diagram-tmd-rd-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L5/apical/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11907,13 +11907,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L5-apical-diagram-tmd-rd-perslay-stratified-k-fold - md5: 011872f7a7d7252acd0dae961e58c136.dir - size: 3551882 - nfiles: 13 + md5: 333c180e6bf8926ff59b5fae5e860d1d.dir + size: 9689832 + nfiles: 34 train@in-L1-axon-image-tmd-rd-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/axon/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11967,13 +11967,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L6-axon-image-deepwalk-xgb-stratified-k-fold - md5: f2c14ac3e8374496c347bcf523689237.dir - size: 28111382 - nfiles: 13 + md5: 7c780e087952713be8b1801743a227b4.dir + size: 77419271 + nfiles: 34 train@in-L5-axon-image-deepwalk-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/axon/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12007,13 +12007,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L5-axon-diagram-deepwalk-perslay-stratified-k-fold - md5: 86908735262b27eddeb08924dcee7521.dir - size: 3539371 - nfiles: 13 + md5: 14e259fd0289d7d3484e4fe6e9ad6b5e.dir + size: 9620242 + nfiles: 34 train@pc-L3-apical-image-deepwalk-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L3/apical/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12027,13 +12027,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L3-apical-image-deepwalk-xgb-stratified-k-fold - md5: 65183dc0e346e6401894e3c70040a87b.dir - size: 19992873 - nfiles: 13 + md5: 36a904b8e0e9dcc5f0583ed30481b6d5.dir + size: 54910025 + nfiles: 34 train@in-L4-axon-graph-rd-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/axon/graph-rd --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12047,13 +12047,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L4-axon-graph-rd-gnn-stratified-k-fold - md5: 2ed791729b604151543f4750401724b2.dir - size: 9634832 - nfiles: 13 + md5: 8216d17d469ce4600f8095db2ff9053e.dir + size: 26431208 + nfiles: 34 train@pc-L6-apical-graph-proj-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/apical/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12067,13 +12067,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L6-apical-graph-proj-gnn-stratified-k-fold - md5: cb4b6616208c26e87de88294a79c5144.dir - size: 9745139 - nfiles: 13 + md5: b7b8f40d2e22c4c74989482304f74a2d.dir + size: 26722107 + nfiles: 34 train@in-L5-axon-diagram-tmd-rd-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/axon/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12087,13 +12087,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L5-axon-diagram-tmd-rd-perslay-stratified-k-fold - md5: 6b32ade764853034dcd6b79fb5609407.dir - size: 3539186 - nfiles: 13 + md5: d84682e24b394d137b6330cd763b32fb.dir + size: 9620241 + nfiles: 34 train@in-L6-axon-image-tmd-rd-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/axon/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12107,13 +12107,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L6-axon-image-tmd-rd-cnn-stratified-k-fold - md5: 71619eda5fb786c2fffb945bbf3c9566.dir - size: 5326908 - nfiles: 13 + md5: ea914cabd37d1f35effbb56a28ee0936.dir + size: 14638851 + nfiles: 34 train@in-L5-axon-image-tmd-rd-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/axon/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12147,13 +12147,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L2-apical-graph-proj-gnn-stratified-k-fold - md5: a445338669706cd48a884e6e74eb638f.dir - size: 8958513 - nfiles: 13 + md5: 3a0e872428f8eb97bf7b02400c3618c7.dir + size: 24585363 + nfiles: 34 train@in-L1-axon-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/axon/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12187,13 +12187,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L2-apical-image-deepwalk-xgb-stratified-k-fold - md5: 1b8390dfb3ae031815b6eff72ddae1a8.dir - size: 19893287 - nfiles: 13 + md5: 5540ac795687f24fcd4f2d2d0fb9d759.dir + size: 54710625 + nfiles: 34 train@pc-L2-apical-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/apical/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12247,13 +12247,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - 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size: 65135161 - nfiles: 13 + md5: ac2bda001e0ad1c665392b293e04e516.dir + size: 179453190 + nfiles: 34 train@in-L6-axon-image-tmd-rd-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/axon/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12627,13 +12627,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L6-axon-image-tmd-rd-xgb-stratified-k-fold - md5: b8912ee83fc5312c339e048a43a479d5.dir - size: 27052563 - nfiles: 13 + md5: a325dbc3b5fb302bb30d0e83a4ab9fe5.dir + size: 74443154 + nfiles: 34 train@in-L4-axon-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/axon/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12647,13 +12647,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L4-axon-image-deepwalk-decision-tree-stratified-k-fold - md5: f6d94f7b94f56eafe3aaaa03b4b43177.dir - size: 46620730 - nfiles: 13 + md5: fa2681ae31319b10dce3e7468b4036f0.dir + size: 128161521 + nfiles: 34 train@pc-L3-apical-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L3/apical/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12667,13 +12667,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L3-apical-diagram-deepwalk-perslay-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L4-axon-diagram-tmd-rd-perslay-stratified-k-fold - md5: ff2957c5bfe3be570ddc15db7127c0a2.dir - size: 3528099 - nfiles: 13 + md5: 152b1fe33b28ffc2b4e4db2c2b00a753.dir + size: 9613080 + nfiles: 34 train@pc-L2-apical-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/apical/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12787,13 +12787,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L2-apical-image-deepwalk-decision-tree-stratified-k-fold - md5: 5a9ee0e7af0c46f42dc1003e2e80a53b.dir - size: 19313062 - nfiles: 13 + md5: c6822fefa412f5d687496a46619ead86.dir + size: 53038019 + nfiles: 34 train@in-L23-axon-image-tmd-rd-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/axon/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12847,13 +12847,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L1-axon-image-tmd-rd-cnn-stratified-k-fold - md5: 0693c84bce7287af4c22af36dfa1613b.dir - size: 6687291 - nfiles: 13 + md5: f3cc155061fcc2551e089dae9ded0e7e.dir + size: 18318096 + nfiles: 34 train@in-L5-axon-image-tmd-rd-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/axon/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12927,13 +12927,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L3-all-graph-rd-gnn-stratified-k-fold - md5: 12a31fdfbdaf73c1754b2ea13cdc4062.dir - size: 8951247 - nfiles: 13 + md5: 47ae5e7c4e8b1e94aeafe7adcd363474.dir + size: 24567706 + nfiles: 34 train-alt-neurites@pc-L2-basal-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/basal/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13007,13 +13007,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-basal-diagram-deepwalk-perslay-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L2-basal-image-tmd-proj-decision-tree-stratified-k-fold - md5: 7b61a9d4dc05f1e407273cc7b00a4a47.dir - size: 19461360 - nfiles: 13 + md5: 9f829e64d9d7aa54ae2753e9b03f0683.dir + size: 53468498 + nfiles: 34 train-alt-neurites@pc-L3-axon-graph-rd-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L3/axon/graph-rd --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13127,13 +13127,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L6-axon-image-deepwalk-xgb-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-basal-image-tmd-rd-cnn-stratified-k-fold - md5: aca5264a219ca665783a66bd39015e12.dir - size: 5324873 - nfiles: 13 + md5: 77f97959e8fc0f1243a8ba75ec42733a.dir + size: 14624485 + nfiles: 34 train-alt-neurites@in-L4-basal-graph-rd-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/basal/graph-rd --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13207,13 +13207,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-basal-graph-rd-gnn-stratified-k-fold - md5: 44b2e45e3de092555c5a65eccbaa16af.dir - size: 9639005 - nfiles: 13 + md5: 240386065504427f6c1a5f54eee03d5b.dir + size: 26433579 + nfiles: 34 train-alt-neurites@in-L6-all-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/all/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13227,13 +13227,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-all-diagram-deepwalk-perslay-stratified-k-fold - md5: b243578a03271238ec6eb7cfc0d749ce.dir - size: 3432372 - nfiles: 13 + md5: abe0210d3ae9180089f2f108557274a8.dir + size: 9381638 + nfiles: 34 train-alt-neurites@in-L4-basal-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/basal/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13247,13 +13247,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-basal-image-deepwalk-decision-tree-stratified-k-fold - md5: f8f8b647aa9011385a9a79b72c6f4c61.dir - size: 47269227 - nfiles: 13 + md5: efe251eaff8b0ec6a1ba4bd2fede7e02.dir + size: 129951620 + nfiles: 34 train-alt-neurites@in-L6-basal-diagram-tmd-rd-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/basal/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13267,13 +13267,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-basal-diagram-tmd-rd-perslay-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L4-basal-diagram-tmd-rd-perslay-stratified-k-fold - md5: 26fc63356c436e8adbc5f52ed5a9d8b2.dir - size: 3461826 - nfiles: 13 + md5: 163c2515b805ba6f74637955b5cf7e86.dir + size: 9424383 + nfiles: 34 train-alt-neurites@in-L1-basal-image-tmd-rd-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/basal/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13347,13 +13347,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L4-all-diagram-deepwalk-perslay-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L23-basal-image-tmd-rd-cnn-stratified-k-fold - md5: 24fa57ad00996871e0a292dcbf4e2f68.dir - size: 8327993 - nfiles: 13 + md5: 0728f4dc373c0546bd45df8187a95440.dir + size: 22798356 + nfiles: 34 train-alt-neurites@pc-L2-basal-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/basal/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13407,13 +13407,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L2-basal-diagram-deepwalk-perslay-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-all-image-deepwalk-xgb-stratified-k-fold - md5: 350cde705e0ab9a828cf902559c53cce.dir - size: 50320022 - nfiles: 13 + md5: 64721a49c03d9aca1c4e168157cec80b.dir + size: 138594544 + nfiles: 34 train-alt-neurites@in-L4-all-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/all/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13487,13 +13487,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-all-diagram-deepwalk-perslay-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L5-basal-image-tmd-rd-cnn-stratified-k-fold - md5: d75a02abf3f63a63c1542390a58166de.dir - size: 8258446 - nfiles: 13 + md5: 012656ef05ed5041bdd03e403e488446.dir + size: 22672535 + nfiles: 34 train-alt-neurites@pc-L4-basal-image-tmd-rd-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/basal/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13567,13 +13567,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L4-basal-image-tmd-rd-cnn-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L5-axon-image-tmd-rd-xgb-stratified-k-fold - md5: 01490d710f9281ded41af308c5586dc4.dir - size: 65438852 - nfiles: 13 + md5: c6d2d49ad2507c53365e093b4821e619.dir + size: 180207772 + nfiles: 34 train-alt-neurites@pc-L3-basal-graph-rd-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L3/basal/graph-rd --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13647,13 +13647,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L4-all-image-tmd-rd-decision-tree-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L6-basal-image-deepwalk-decision-tree-stratified-k-fold - md5: 5a40587d2470a661e23fb045a555f27f.dir - size: 52364224 - nfiles: 13 + md5: 3f113dc1cf0d51bdfe8958231512552b.dir + size: 143960060 + nfiles: 34 train-alt-neurites@in-L6-all-image-deepwalk-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/all/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13767,13 +13767,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-all-image-deepwalk-cnn-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-basal-image-tmd-rd-cnn-stratified-k-fold - md5: d72011f72d28bd283c47b91150e2b890.dir - size: 6995560 - nfiles: 13 + md5: b132d3751d6fa4cb089c0078c874d57a.dir + size: 19168901 + nfiles: 34 train-alt-neurites@pc-L4-basal-image-tmd-rd-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/basal/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13907,13 +13907,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L4-basal-image-tmd-rd-xgb-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-basal-image-tmd-rd-xgb-stratified-k-fold - md5: 4a00d05aeeac0fdc9fe02a7719f5bc0a.dir - size: 28064123 - nfiles: 13 + md5: 67a235cc8e05b021810113d1ad5a9fea.dir + size: 77284148 + nfiles: 34 train-alt-neurites@pc-L3-axon-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L3/axon/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13987,13 +13987,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L3-axon-image-deepwalk-decision-tree-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L5-all-image-tmd-rd-decision-tree-stratified-k-fold - md5: 96af62051285e66526612590d5bc5648.dir - size: 65433269 - nfiles: 13 + md5: f3f86fb336d3f843f7c5dc63e75ff01c.dir + size: 179821809 + nfiles: 34 train-alt-neurites@pc-L2-basal-image-tmd-proj-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/basal/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14087,13 +14087,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L4-basal-diagram-deepwalk-perslay-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L4-all-image-deepwalk-cnn-stratified-k-fold - md5: 27bbeabb74d0e1c4e5aa9471288a2bd5.dir - size: 6089708 - nfiles: 13 + md5: ccff276a5ed18e6d8950ea6693499bda.dir + size: 16660743 + nfiles: 34 train-alt-neurites@pc-L6-basal-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/basal/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14447,13 +14447,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L6-basal-diagram-deepwalk-perslay-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L5-all-image-tmd-rd-cnn-stratified-k-fold - md5: 2e9cfb57bb25243131ae10bda51b0c19.dir - size: 8270360 - nfiles: 13 + md5: 24d0e4c270a5088a490f4f56c80dcbc9.dir + size: 22670317 + nfiles: 34 train-alt-neurites@in-L23-basal-graph-rd-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/basal/graph-rd --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14547,13 +14547,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L23-basal-graph-rd-gnn-stratified-k-fold - md5: 00b05c3c8205187f8bf7d332a51121b3.dir - size: 10030538 - nfiles: 13 + md5: 35960f9ae3496b4c0f820484d69e85cb.dir + size: 27482570 + nfiles: 34 train-alt-neurites@in-L6-basal-image-deepwalk-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/basal/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14587,13 +14587,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L6-all-graph-proj-gnn-stratified-k-fold - md5: 0d1bd6d1c2c02f7559a67738769d5ac3.dir - size: 9751420 - nfiles: 13 + md5: faea388ce426d4c50d54e38c4e9c4114.dir + size: 26721761 + nfiles: 34 train-alt-neurites@pc-L2-axon-image-deepwalk-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/axon/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14627,13 +14627,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L5-all-image-deepwalk-xgb-stratified-k-fold - md5: 7cf796b4cc6f9e0bf38e22354c208541.dir - size: 68605171 - nfiles: 13 + md5: 10110dd3e668e7039d6c7f6dcb89d2be.dir + size: 188835443 + nfiles: 34 train-alt-neurites@pc-L2-all-image-tmd-proj-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/all/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14807,13 +14807,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L2-all-image-tmd-proj-decision-tree-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-basal-graph-rd-gnn-stratified-k-fold - md5: 9c5dff86b3b80e5e8fe65361c4a8717b.dir - size: 9153489 - nfiles: 13 + md5: 8bc0cad08f6395878fcc5ed49475f84c.dir + size: 25117533 + nfiles: 34 train-alt-neurites@pc-L6-axon-image-tmd-proj-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/axon/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14887,13 +14887,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-all-image-deepwalk-cnn-stratified-k-fold - md5: 1fe62e18f2d2030cf70aae15b6fae4b9.dir - size: 6995282 - nfiles: 13 + md5: 123e1d9e7322618999f6232e490096c1.dir + size: 19180996 + nfiles: 34 train-alt-neurites@pc-L2-basal-diagram-tmd-proj-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/basal/diagram-tmd-proj --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14967,13 +14967,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L3-basal-image-tmd-rd-decision-tree-stratified-k-fold - md5: 44a47c5f56b7b46c3413810deac77aa6.dir - size: 21127357 - nfiles: 13 + md5: 20b6dbd8818683e185353f6bc8448bfc.dir + size: 58048040 + nfiles: 34 train-alt-neurites@pc-L2-all-image-deepwalk-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/all/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14987,13 +14987,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L2-all-image-deepwalk-xgb-stratified-k-fold - md5: 909790c030e875fb284f3309238127d0.dir - size: 21197928 - nfiles: 13 + md5: 101828923f13c7853f6a1d50cd21d2a9.dir + size: 58280943 + nfiles: 34 train-alt-neurites@pc-L4-axon-image-tmd-rd-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/axon/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15027,13 +15027,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-all-image-tmd-rd-cnn-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L2-axon-image-tmd-proj-decision-tree-stratified-k-fold - md5: 960c11edaec0e1bf65775ca2e270917e.dir - size: 18526346 - nfiles: 13 + md5: e3235f170d7d37092fc1462631e7bbd0.dir + size: 50931503 + nfiles: 34 train-alt-neurites@pc-L2-all-image-tmd-proj-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/all/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15107,13 +15107,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L2-all-image-tmd-proj-cnn-stratified-k-fold - md5: 595defb5a974325421cc1755747bc139.dir - size: 4682798 - nfiles: 13 + md5: eb3426c0af6c8b041bfc584adfe40858.dir + size: 12827211 + nfiles: 34 train-alt-neurites@pc-L4-axon-graph-rd-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/axon/graph-rd --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15147,13 +15147,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-basal-diagram-tmd-rd-perslay-stratified-k-fold - md5: 3daaa1cac508b6292b0e0f87951a650f.dir - size: 3528420 - nfiles: 13 + md5: 2ed6aa5aa82a726d5611efb7f0e90647.dir + size: 9613152 + nfiles: 34 train-lida-in-merged-bc-merged@decision-tree-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/axon/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15167,13 +15167,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-bc-merged-decision-tree-tmd-stratified-k-fold - md5: e3052030f3664ec44e2128f7c7adce35.dir - size: 154543162 - nfiles: 13 + md5: a5936e969ce63f012263a80879740a33.dir + size: 424861345 + nfiles: 34 train-alt-neurites@in-L1-all-image-tmd-rd-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/all/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15187,13 +15187,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-all-image-tmd-rd-xgb-stratified-k-fold - md5: f2e8d6f42cb8469f9cce2c3be0f8a894.dir - size: 43969952 - nfiles: 13 + md5: 808022feb006dd8093bfb96406e06bc5.dir + size: 121080543 + nfiles: 34 train-alt-neurites@in-L1-basal-diagram-tmd-rd-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/basal/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15207,13 +15207,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-basal-diagram-tmd-rd-perslay-stratified-k-fold - md5: 47602d9b8f770e6b6515a13ceaaaca90.dir - size: 3506287 - nfiles: 13 + md5: 794ce9c720191b64463d94b908a2cf5c.dir + size: 9553595 + nfiles: 34 train-alt-neurites@pc-L3-basal-image-tmd-rd-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L3/basal/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15227,13 +15227,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L3-basal-image-tmd-rd-xgb-stratified-k-fold - md5: 2c1739bab32b67607a51f7fab53ec769.dir - size: 21530449 - nfiles: 13 + md5: ee30e79b5656870a10c1428d478cc36c.dir + size: 59194986 + nfiles: 34 train-alt-neurites@pc-L2-all-graph-proj-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/all/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15247,13 +15247,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L2-all-graph-proj-gnn-stratified-k-fold - md5: 1fd9028d557adaa57c9892063d578ef7.dir - size: 8958972 - nfiles: 13 + md5: 92e84ecff70c001352a4e38a6165c41c.dir + size: 24584142 + nfiles: 34 train-alt-neurites@in-L1-basal-image-tmd-rd-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/basal/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15267,13 +15267,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-basal-image-tmd-rd-decision-tree-stratified-k-fold - md5: 32651dfac617ef1391553055c8d58a2b.dir - size: 43201328 - nfiles: 13 + md5: fafe06631807a66fab5713baf5e78b67.dir + size: 118748713 + nfiles: 34 train-alt-neurites@pc-L6-basal-image-tmd-proj-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/basal/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15287,13 +15287,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L6-basal-image-tmd-proj-xgb-stratified-k-fold - md5: 3480e6954ad9cc837b71f6c868432a3a.dir - size: 49758386 - nfiles: 13 + md5: 86c76364aab983e165902492dd0c71c3.dir + size: 137118080 + nfiles: 34 train-alt-neurites@pc-L2-basal-graph-proj-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/basal/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15327,13 +15327,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L6-all-image-deepwalk-cnn-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L23-all-image-deepwalk-xgb-stratified-k-fold - md5: 6eae0ba87ceceba3ae20971c3d33b4d5.dir - size: 67615768 - nfiles: 13 + md5: 84e53fa9a366c1cd319c70727539f104.dir + size: 186184410 + nfiles: 34 train-alt-neurites@in-L1-all-graph-rd-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/all/graph-rd --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15447,13 +15447,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L6-axon-diagram-tmd-proj-perslay-stratified-k-fold - md5: 5e3e21e04cd7543e977bebc934873188.dir - size: 3543526 - nfiles: 13 + md5: da393ed53fb866b4aabd55d2c860e492.dir + size: 9636259 + nfiles: 34 train-alt-neurites@pc-L3-basal-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L3/basal/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15467,13 +15467,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L3-basal-diagram-deepwalk-perslay-stratified-k-fold - md5: 067f0ae95c8aa2d63c6cdb9c727900b6.dir - size: 3395741 - nfiles: 13 + md5: d0abaca63b873889bb1e756044230a32.dir + size: 9246876 + nfiles: 34 train-alt-neurites@pc-L6-all-diagram-tmd-proj-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/all/diagram-tmd-proj --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15507,13 +15507,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L2-all-image-tmd-proj-xgb-stratified-k-fold - md5: 9f8b4f7f15f94149aea5806a2adb8fab.dir - size: 19683481 - nfiles: 13 + md5: 5ab85a118bfdaa0f6673ef4ead663b2e.dir + size: 54081422 + nfiles: 34 train-alt-neurites@pc-L4-basal-image-tmd-rd-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/basal/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15527,13 +15527,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L4-basal-image-tmd-rd-decision-tree-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L2-all-image-deepwalk-cnn-stratified-k-fold - md5: 5fcd5167f9385a6e6fd4b5e610dfbd49.dir - size: 4695686 - nfiles: 13 + md5: 8cd0c96b5cd5c32a43677c49dd5f0246.dir + size: 12823952 + nfiles: 34 train-alt-neurites@pc-L4-all-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/all/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15687,13 +15687,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L4-all-image-deepwalk-decision-tree-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L5-all-diagram-tmd-rd-perslay-stratified-k-fold - md5: 64c47bdbfdd6114531b653013a03973a.dir - size: 3539120 - nfiles: 13 + md5: 0b78ae4ecebaa656c6d7cbc59bbc31b0.dir + size: 9619992 + nfiles: 34 train-alt-neurites@in-L23-basal-diagram-tmd-rd-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/basal/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15747,13 +15747,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L23-basal-diagram-tmd-rd-perslay-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L3-axon-image-tmd-rd-cnn-stratified-k-fold - md5: 5184e539797a52bd0c1d1a9929c3a67a.dir - size: 4676565 - nfiles: 13 + md5: b012723c342bee5ff63c22eeece14150.dir + size: 12815106 + nfiles: 34 train-alt-neurites@pc-L5-all-image-tmd-rd-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L5/all/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15867,13 +15867,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L5-all-image-tmd-rd-xgb-stratified-k-fold - md5: 8ad970bf2e8659ea5eb687f50dcd1454.dir - size: 66481640 - nfiles: 13 + md5: 324d5baf378a8f119b3fecdcf0d64374.dir + size: 182942698 + nfiles: 34 train-alt-neurites@pc-L2-all-diagram-tmd-proj-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/all/diagram-tmd-proj --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15887,13 +15887,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L2-all-diagram-tmd-proj-perslay-stratified-k-fold - md5: 3196f91f4959e65e9faabfbf597cb896.dir - size: 3406408 - nfiles: 13 + md5: c1c9f8864528a8356bf96c589e455512.dir + size: 9263385 + nfiles: 34 train-alt-neurites@pc-L2-basal-image-deepwalk-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/basal/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15907,13 +15907,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L2-basal-image-deepwalk-xgb-stratified-k-fold - md5: b1cbf439bdcf0231bba54522a941b7b1.dir - size: 21132619 - nfiles: 13 + md5: 3574dc2885a53985a30d4bb57910329a.dir + size: 58056929 + nfiles: 34 train-alt-neurites@pc-L3-all-image-deepwalk-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L3/all/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16007,13 +16007,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L23-all-image-tmd-rd-cnn-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-all-image-tmd-rd-decision-tree-stratified-k-fold - md5: c15b2fab8dd547e3baf1685c0edafdf1.dir - size: 26029552 - nfiles: 13 + md5: d97d215c19cb3fc75d9698f2a961bbe1.dir + size: 71535893 + nfiles: 34 train-alt-neurites@pc-L6-basal-image-tmd-proj-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/basal/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16347,13 +16347,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L6-basal-image-tmd-proj-decision-tree-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L3-axon-image-tmd-rd-decision-tree-stratified-k-fold - md5: 83868ceb414768bbebcb0b6f2b7c4da6.dir - size: 20378246 - nfiles: 13 + md5: f7372c26e474b6c49b98227f462e433f.dir + size: 55989926 + nfiles: 34 train-alt-neurites@pc-L4-basal-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/basal/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16487,13 +16487,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L6-axon-image-tmd-proj-decision-tree-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L5-all-image-deepwalk-cnn-stratified-k-fold - md5: 7175ccaadc1fc232e724b0c5cffdfb9f.dir - size: 6929594 - nfiles: 13 + md5: af309aac87980116ddcbfab06cd25f5e.dir + size: 19010722 + nfiles: 34 train-alt-neurites@in-L4-all-graph-rd-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/all/graph-rd --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16567,13 +16567,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-all-graph-rd-gnn-stratified-k-fold - md5: 3b941bdbaf18c7312299840fceb7a0c9.dir - size: 9639534 - nfiles: 13 + md5: 6109e7c5fe40bf3958d560e3718432ff.dir + size: 26434083 + nfiles: 34 train-janelia-L5@decision-tree-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-janelia-L5/apical/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16627,13 +16627,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L6-all-image-deepwalk-xgb-stratified-k-fold - md5: 1ce2fafe199fa7036ae34741dbc36565.dir - size: 55755721 - nfiles: 13 + md5: dd304eb1f9f87f90ad17bf74b4ba10bc.dir + size: 153581013 + nfiles: 34 train-alt-neurites@pc-L2-axon-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/axon/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16667,13 +16667,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L5-axon-image-tmd-rd-decision-tree-stratified-k-fold - md5: 77ee1f572ef407db8c13d81de4cd25f7.dir - size: 64190379 - nfiles: 13 + md5: e6c6a669bcfc208e98c12576b09465a2.dir + size: 176442220 + nfiles: 34 train-alt-neurites@in-L23-all-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/all/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16707,13 +16707,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L2-all-diagram-deepwalk-perslay-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L6-basal-image-tmd-proj-cnn-stratified-k-fold - md5: 4d34f27610199f50c19445f025d783a8.dir - size: 7371608 - nfiles: 13 + md5: 8f7d2dbd22462930d149934a525dbe2e.dir + size: 20225907 + nfiles: 34 train-alt-neurites@pc-L3-all-image-tmd-rd-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L3/all/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16807,13 +16807,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 - outs: + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 + outs: - path: training/checkpoints-alt-neurites/pc-L3-all-image-tmd-rd-decision-tree-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L2-axon-image-tmd-proj-cnn-stratified-k-fold - md5: 3b79f0428ae01d83411322b692044496.dir - size: 4583233 - nfiles: 13 + md5: 52eb5362b7a75871e98e04858f7dd65e.dir + size: 12585372 + nfiles: 34 train-alt-neurites@pc-L4-axon-image-tmd-rd-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/axon/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16947,13 +16947,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L4-axon-image-deepwalk-cnn-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-all-image-tmd-rd-cnn-stratified-k-fold - md5: 41066da387922c83dea6f91b281cdab2.dir - size: 7005167 - nfiles: 13 + md5: ceb81a5ffe12a4aba10f8316f9ed09cc.dir + size: 19175284 + nfiles: 34 train-alt-neurites@pc-L6-axon-graph-proj-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/axon/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -17127,13 +17127,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L5-basal-diagram-deepwalk-perslay-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L23-all-image-deepwalk-decision-tree-stratified-k-fold - md5: 963489347491d475de36c714ebdac070.dir - size: 65699104 - nfiles: 13 + md5: d0085cd4d2a440b65ac8148368e0c532.dir + size: 180590410 + nfiles: 34 train-alt-neurites@in-L5-all-image-tmd-rd-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/all/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -17207,13 +17207,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-all-diagram-deepwalk-perslay-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L5-all-image-tmd-rd-decision-tree-stratified-k-fold - md5: 899924b1b1b8f003c2ac186bb2997b07.dir - size: 45193061 - nfiles: 13 + md5: c2ba577db4115794f3cbc5e2fd5446df.dir + size: 124188145 + nfiles: 34 train-alt-neurites@in-L4-basal-image-tmd-rd-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/basal/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -17327,13 +17327,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-decision-tree-deepwalk-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-xgb-tmd-stratified-k-fold - md5: ee461743ed41fe9342046e697da91bc4.dir - size: 155691553 - nfiles: 13 + md5: 386c1049362f48c8fadd1f63586e0e16.dir + size: 428408635 + nfiles: 34 train-lida-in-merged-bc-merged-all@decision-tree-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/all/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -17407,13 +17407,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-decision-tree-tmd-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-perslay-deepwalk-stratified-k-fold - md5: 97eee09d022779e1d3b80a53e7611f2b.dir - size: 3917756 - nfiles: 13 + md5: 4591d7d34201098bcaf26bed3a6c39ac.dir + size: 10652102 + nfiles: 34 train-lida-in-merged-bc-merged-all@perslay-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/all/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -17467,13 +17467,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-perslay-tmd-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-xgb-deepwalk-stratified-k-fold - md5: 9b4d5b9d97f0b83265c299a879c21e26.dir - size: 169359718 - nfiles: 13 + md5: 929cfe54b2ba37641372b4f359b744bb.dir + size: 466150713 + nfiles: 34 train-lida-in-merged-bc-merged-all@cnn-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/all/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -17587,13 +17587,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-xgb-tmd-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-decision-tree-tmd-stratified-k-fold - md5: 940bd115050d1fda51b0862f0a9f3aa7.dir - size: 152277088 - nfiles: 13 + md5: d25efa379c43764ab2480cbf232dccec.dir + size: 418636729 + nfiles: 34 train-janelia-L5-axon@decision-tree-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-janelia-L5/axon/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -17707,13 +17707,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/janelia-L5-basal-decision-tree-deepwalk-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/janelia-L5-basal-xgb-deepwalk-stratified-k-fold - md5: f215bfd759080e2a784ead34a431959f.dir - size: 27436009 - nfiles: 13 + md5: 0848bce8f23a23235b5ecf2cb05e7d69.dir + size: 75543431 + nfiles: 34 train-janelia-L5-all@cnn-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-janelia-L5/all/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -17767,13 +17767,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/janelia-L5-all-cnn-deepwalk-stratified-k-fold - md5: ecb56f6785800e7ad5af57e980417b40.dir - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/janelia-L5-basal-gnn-morphology-stratified-k-fold - md5: 81a95939cb8ed98a7ef4d356b744b8ea.dir - size: 9091365 - nfiles: 13 + md5: bd0a34b2473d43437ffa77249f7f5af9.dir + size: 24985465 + nfiles: 34 train-janelia-L5-all@perslay-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-janelia-L5/all/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -17927,13 +17927,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/janelia-L5-axon-xgb-tmd-stratified-k-fold - md5: c61da41614ca7c956411b9df09dfdd66.dir - size: 26071844 - nfiles: 13 + md5: 6a97c622d99d4d2891400b590f312f52.dir + size: 71756644 + nfiles: 34 train-janelia-L5-axon@cnn-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-janelia-L5/axon/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -17947,13 +17947,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/janelia-L5-axon-cnn-tmd-stratified-k-fold - md5: 8d099ff1427552efc81613d0d55b6f1e.dir - size: 5168312 - nfiles: 13 + md5: 8291a8fa272d595842dd2f1fb109d68b.dir + size: 14196927 + nfiles: 34 train-janelia-L5-all@decision-tree-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-janelia-L5/all/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -17967,13 +17967,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - 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size: 9105368 - nfiles: 13 + md5: 6eaa89d172e096b6c9682ad5204ef934.dir + size: 24978545 + nfiles: 34 train-janelia-L5-all@perslay-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-janelia-L5/all/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -18007,13 +18007,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/janelia-L5-all-perslay-deepwalk-stratified-k-fold - md5: a6a630e43ecea37bfe8b936f40e9e9db.dir - size: 3421140 - nfiles: 13 + md5: e2f182d3a46545db52711ff386299900.dir + size: 9339383 + nfiles: 34 train-janelia-L5-axon@cnn-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-janelia-L5/axon/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -18067,13 +18067,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/janelia-L5-all-xgb-deepwalk-stratified-k-fold - md5: a9813910df247313bf899f2f48aecc6b.dir - size: 27388213 - nfiles: 13 + md5: 0ee0833488a5c879813c82432cbbc443.dir + size: 75365547 + nfiles: 34 train-janelia-L5-axon@xgb-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-janelia-L5/axon/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -18107,13 +18107,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/janelia-L5-basal-perslay-tmd-stratified-k-fold - md5: c0d9957c85f5d89e136590a7390fc74e.dir - 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size: 3964002 - nfiles: 13 + md5: 04cb30bb738b6742b38f74dc376bc0e4.dir + size: 10681609 + nfiles: 34 train-lida-in-merged-basal@cnn-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/basal/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -18307,13 +18307,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-all-perslay-deepwalk-stratified-k-fold - md5: bb2adf21f9009106e084ac9e8d5340aa.dir - size: 3963489 - nfiles: 13 + md5: 9a2d50926235999163dd84698b8947c6.dir + size: 10681330 + nfiles: 34 train-lida-in-merged-all@xgb-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/all/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -18367,13 +18367,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-basal-decision-tree-tmd-stratified-k-fold - md5: 4026811078cc96a09721f0818175b262.dir - size: 152374350 - nfiles: 13 + md5: 03266369c46704c6a3d29fd88439c386.dir + size: 418801149 + nfiles: 34 train-lida-in-merged-basal@perslay-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/basal/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -18387,13 +18387,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-basal-perslay-tmd-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-basal-gnn-morphology-stratified-k-fold - md5: a140c7afa6085a89386a22073947ad30.dir - size: 12290011 - nfiles: 13 + md5: 5cb10e69f52900a13de5cd51c01f431c.dir + size: 33564102 + nfiles: 34 train-lida-in-merged-basal@perslay-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/basal/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -18507,13 +18507,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-all-gnn-morphology-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-morphometrics/in-L6-all-morphometrics-xgb-stratified-k-fold - md5: 08d3ec819a9a0e25fefc67921dd932a2.dir - size: 1119471 + md5: 71a1cacb4083575ad5e3b0b1e63e03e9.dir + size: 2930543 nfiles: 1 features-morphometrics@janelia-L5-all: cmd: morphoclass -vv morphometrics extract-features --dataset-csv ./data/final/janelia/L5/dataset.csv @@ -18735,12 +18735,12 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-morphometrics/janelia-L5-all-morphometrics-xgb-stratified-k-fold - md5: 6cce6ab5a8450ea0c4c30a8a39a886d7.dir - size: 984495 + md5: fe0d1536f7ca4e24264e39833bcc5988.dir + size: 2598255 nfiles: 1 features-morphometrics@pc-L2-all: cmd: morphoclass -vv morphometrics extract-features --dataset-csv ./data/final/pyramidal-cells/L2/dataset.csv @@ -18763,12 +18763,12 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-morphometrics/pc-L2-all-morphometrics-xgb-stratified-k-fold - md5: 8853b8f4dbae289282281f1c403fb0c3.dir - size: 691503 + md5: 00ec33df75a1666a8070b96e2a4ef99e.dir + size: 1781743 nfiles: 1 features-morphometrics@pc-L3-all: cmd: morphoclass -vv morphometrics extract-features --dataset-csv ./data/final/pyramidal-cells/L3/dataset.csv @@ -18847,12 +18847,12 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-morphometrics/pc-L5-all-morphometrics-xgb-stratified-k-fold - md5: 481306bdbe508efb4a451de45f494423.dir - size: 1432047 + md5: f5c058db55bbfdd7fec26c000fea70ca.dir + size: 3578543 nfiles: 1 features-morphometrics@pc-L6-all: cmd: morphoclass -vv morphometrics extract-features --dataset-csv ./data/final/pyramidal-cells/L6/dataset.csv @@ -18875,12 +18875,12 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-morphometrics/pc-L6-all-morphometrics-xgb-stratified-k-fold - md5: f95ce296c7cd45e2038c60db3d54ca7a.dir - size: 1606447 + md5: eaedb351afa86446fe0659a4d552d571.dir + size: 4111983 nfiles: 1 features-morphometrics@in-merged-all: cmd: morphoclass -vv morphometrics extract-features --dataset-csv ./data/final/IN_data.csv @@ -18931,12 +18931,12 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-morphometrics/in-merged-bc-merged-all-morphometrics-xgb-stratified-k-fold - md5: 127aa414bb7dd8eaeb3181a8e6d12c7a.dir - size: 2441839 + md5: 2429377c62788834753f437bb69c05be.dir + size: 5778223 nfiles: 1 features-in-L1-diagram-tmd-proj-all: cmd: morphoclass -v extract-features data/final/interneurons/L1/dataset.csv all @@ -19821,13 +19821,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L1-axon-diagram-tmd-proj-perslay-stratified-k-fold - md5: 4068adbf2d38d528a8940da61811ad40.dir - size: 3506284 - nfiles: 13 + md5: 7aafa297e0a9d861d43fef8579d83183.dir + size: 9553539 + nfiles: 34 train@in-L1-axon-graph-proj-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/axon/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -19841,13 +19841,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L1-axon-graph-proj-gnn-stratified-k-fold - md5: 0c28582e2958c5146422546606c94cba.dir - size: 9526396 - nfiles: 13 + md5: 257ee439abaee2441e071b421398a26a.dir + size: 26164103 + nfiles: 34 train@in-L1-axon-image-tmd-proj-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/axon/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -19861,13 +19861,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L1-axon-image-tmd-proj-cnn-stratified-k-fold - md5: 9b4f93706b13854a000e19e19c1d4299.dir - size: 6683335 - nfiles: 13 + md5: c4bc258d7ce03dbed17d60bd5499c44b.dir + size: 18318819 + nfiles: 34 train@in-L1-axon-image-tmd-proj-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/axon/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -19881,13 +19881,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L1-axon-image-tmd-proj-decision-tree-stratified-k-fold - md5: f5c8a17518889062073b94229dd98383.dir - size: 40128224 - nfiles: 13 + md5: 5d283a5d0f8b5c85f49a0ed5d487de52.dir + size: 110300798 + nfiles: 34 train@in-L1-axon-image-tmd-proj-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/axon/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -19901,13 +19901,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L1-axon-image-tmd-proj-xgb-stratified-k-fold - md5: eccee5a4adbc11eb28349b4d476ffec5.dir - size: 41470101 - nfiles: 13 + md5: 3eb15e068c98171385891c69dfccf61e.dir + size: 114181155 + nfiles: 34 train@in-L23-axon-diagram-tmd-proj-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/axon/diagram-tmd-proj --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -19941,13 +19941,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L23-axon-graph-proj-gnn-stratified-k-fold - md5: 00401c7f6c5ea6884948df446d5c6768.dir - size: 10025874 - nfiles: 13 + md5: 309249e6745467c862f524fce5f3b4ba.dir + size: 27472795 + nfiles: 34 train@in-L23-axon-image-tmd-proj-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/axon/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -19961,13 +19961,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L23-axon-image-tmd-proj-cnn-stratified-k-fold - md5: 42e797452d790f7c7dde1223452ce19c.dir - size: 8342476 - nfiles: 13 + md5: 1d200f96a8946a265c50f9bb1e8b4932.dir + size: 22799271 + nfiles: 34 train@in-L23-axon-image-tmd-proj-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/axon/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -19981,13 +19981,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L23-axon-image-tmd-proj-decision-tree-stratified-k-fold - md5: 6cfa8f5c167388ee8c796585f6402c17.dir - size: 59604689 - nfiles: 13 + md5: 512998d92a790e5bae0c3c75f9331d05.dir + size: 163791981 + nfiles: 34 train@in-L23-axon-image-tmd-proj-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/axon/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20021,13 +20021,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L4-axon-diagram-tmd-proj-perslay-stratified-k-fold - md5: 859e11859ae2a5957bf0edd4efb05276.dir - size: 3527848 - nfiles: 13 + md5: 97a966ced7a7529a803912ed616d0ee0.dir + size: 9613103 + nfiles: 34 train@in-L4-axon-graph-proj-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/axon/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20041,13 +20041,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L4-axon-graph-proj-gnn-stratified-k-fold - md5: 861cda1e4df5280ef0c70833d25c30f5.dir - size: 9644947 - nfiles: 13 + md5: 5862600f125b55513691f793d1741383.dir + size: 26430908 + nfiles: 34 train@in-L4-axon-image-tmd-proj-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/axon/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20081,13 +20081,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L4-axon-image-tmd-proj-decision-tree-stratified-k-fold - md5: 984b39149c34b0d4a3f81bc0e3b35cde.dir - size: 44137778 - nfiles: 13 + md5: ea14735b498100d657dee3f706d97e76.dir + size: 121301032 + nfiles: 34 train@in-L4-axon-image-tmd-proj-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/axon/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20101,13 +20101,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L4-axon-image-tmd-proj-xgb-stratified-k-fold - md5: 433fa029380b08acb5301104f6973dea.dir - size: 45771909 - nfiles: 13 + md5: 4dbeec49361c1286811d943c19db44d3.dir + size: 125933468 + nfiles: 34 train@in-L5-axon-diagram-tmd-proj-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/axon/diagram-tmd-proj --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20121,13 +20121,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L5-axon-diagram-tmd-proj-perslay-stratified-k-fold - md5: 8d1446b634c36d388b1b2bfbf0d48d82.dir - size: 3539377 - nfiles: 13 + md5: e1f2fe443d5f6f4b35b900d3af49f8a2.dir + size: 9621007 + nfiles: 34 train@in-L5-axon-graph-proj-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/axon/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20141,13 +20141,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L5-axon-graph-proj-gnn-stratified-k-fold - md5: d8595b749191ab663544f35504887f6b.dir - size: 9623390 - nfiles: 13 + md5: b0d4196f4cba89fa53ca5d8f2ff395be.dir + size: 26381057 + nfiles: 34 train@in-L5-axon-image-tmd-proj-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/axon/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20161,13 +20161,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L5-axon-image-tmd-proj-cnn-stratified-k-fold - md5: 1c3f9848e4f3db25796633cbe1ff0388.dir - size: 6938363 - nfiles: 13 + md5: 47f49259a6b6b5c5335036c7b5a92ccb.dir + size: 19010073 + nfiles: 34 train@in-L5-axon-image-tmd-proj-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/axon/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20181,13 +20181,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L5-axon-image-tmd-proj-decision-tree-stratified-k-fold - md5: f606380b5ecaeacf47b94af7e078e1f8.dir - size: 44599756 - nfiles: 13 + md5: 46bc3910b56903ce389edc073b85108c.dir + size: 122570364 + nfiles: 34 train@in-L5-axon-image-tmd-proj-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/axon/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20261,13 +20261,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L6-axon-image-tmd-proj-cnn-stratified-k-fold - md5: 0abf286cab214b044977d02044267c22.dir - size: 5329572 - nfiles: 13 + md5: 8e0ea763ee7184571602a06d2835fba4.dir + size: 14640651 + nfiles: 34 train@in-L6-axon-image-tmd-proj-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/axon/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20301,13 +20301,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L6-axon-image-tmd-proj-xgb-stratified-k-fold - md5: c7d54788f8867d992671e10ca7e495da.dir - size: 26943081 - nfiles: 13 + md5: 79c79580b22775d4e1928e2df909ec14.dir + size: 74151169 + nfiles: 34 train-lida-in-merged-proj@cnn-tmd-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/axon/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20321,13 +20321,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-cnn-tmd-proj-stratified-k-fold - md5: e1f0a9ed89314e4fe0e347df57cd1e35.dir - size: 16389505 - nfiles: 13 + md5: a1c331a15710e15b83bbf44fee6a4318.dir + size: 44857020 + nfiles: 34 train-lida-in-merged-proj@decision-tree-tmd-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/axon/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20341,13 +20341,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-decision-tree-tmd-proj-stratified-k-fold - md5: d47a3bd5c10db89e61381b77edee7e85.dir - size: 150386728 - nfiles: 13 + md5: 8c90d337e0ef0cfd050bc30076f6cb5f.dir + size: 413372922 + nfiles: 34 train-lida-in-merged-proj@gnn-morphology-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/axon/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20361,13 +20361,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-gnn-morphology-proj-stratified-k-fold - md5: 4e63dfd60964f8c4a3c1862f88b75a19.dir - size: 12298250 - nfiles: 13 + md5: a08f685a352092c54bc7d132f341cede.dir + size: 33584215 + nfiles: 34 train-lida-in-merged-proj@perslay-tmd-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/axon/diagram-tmd-proj --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20381,13 +20381,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-perslay-tmd-proj-stratified-k-fold - md5: b6971e4f7213c2d18d7e5a8d8ac02c1b.dir - size: 3965418 - nfiles: 13 + md5: 3bbabe0c14d8e8e58ee71fbb335171f1.dir + size: 10681214 + nfiles: 34 train-lida-in-merged-proj@xgb-tmd-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/axon/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20401,13 +20401,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-xgb-tmd-proj-stratified-k-fold - md5: 432c918393716b6a5ed9ba45fda96a2e.dir - size: 152530310 - nfiles: 13 + md5: 34e766708656230f81e364b8358567a2.dir + size: 419741948 + nfiles: 34 train-lida-in-merged-bc-merged-proj@cnn-tmd-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/axon/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20441,13 +20441,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-bc-merged-decision-tree-tmd-proj-stratified-k-fold - md5: 80d1bd482edb582b96a773ba67b6b632.dir - size: 150322494 - nfiles: 13 + md5: 02be8a0361ff8dda1d83c8a357b3daf0.dir + size: 413260591 + nfiles: 34 train-lida-in-merged-bc-merged-proj@gnn-morphology-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/axon/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20461,13 +20461,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-bc-merged-gnn-morphology-proj-stratified-k-fold - md5: e0ebb1e6cf41a6a779b26d0e8e9ad139.dir - size: 12245467 - nfiles: 13 + md5: da39e2a13a6c35573fc65c8bb3bd43f2.dir + size: 33517466 + nfiles: 34 train-lida-in-merged-bc-merged-proj@perslay-tmd-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/axon/diagram-tmd-proj --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20501,13 +20501,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-bc-merged-xgb-tmd-proj-stratified-k-fold - md5: dcbd1cfb01311c4c8ccd5fcee915dd0f.dir - size: 151810983 - nfiles: 13 + md5: 98e7b43f85827a2c3542f90ebb1c5b32.dir + size: 417676049 + nfiles: 34 train-alt-neurites@in-L5-basal-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/basal/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20561,13 +20561,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L5-basal-diagram-tmd-proj-perslay-stratified-k-fold - md5: a5bfbaee9843822481b1cec3bb69bdfe.dir - size: 3539125 - nfiles: 13 + md5: 89e88d4faddcb63165e70106a90efa27.dir + size: 9620374 + nfiles: 34 train-alt-neurites@in-L5-basal-graph-rd-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/basal/graph-rd --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20621,13 +20621,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L5-basal-image-deepwalk-cnn-stratified-k-fold - md5: 246c050350bdc683c81b4119403f02a8.dir - size: 6936243 - nfiles: 13 + md5: be622648adb8cec4eacf6819ec9c6328.dir + size: 18998785 + nfiles: 34 train-alt-neurites@in-L5-basal-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/basal/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20681,13 +20681,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L5-basal-image-tmd-rd-cnn-stratified-k-fold - md5: c58dd3d35d86efb7306057557b8b9876.dir - size: 6939142 - nfiles: 13 + md5: ef7f7ac709935fe11943707a4d739df5.dir + size: 19005689 + nfiles: 34 train-alt-neurites@in-L5-basal-image-tmd-proj-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/basal/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20701,13 +20701,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L5-basal-image-tmd-proj-cnn-stratified-k-fold - md5: 53086a4395494dfe9a5f37a08813af19.dir - size: 6939613 - nfiles: 13 + md5: 513aa9993a6eb46c3f9b162c9f804252.dir + size: 19003428 + nfiles: 34 train-alt-neurites@in-L5-basal-image-tmd-rd-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/basal/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20721,13 +20721,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L5-basal-image-tmd-rd-decision-tree-stratified-k-fold - md5: e79c54a4d4bb6f3046051d53d4d1c85a.dir - size: 43134014 - nfiles: 13 + md5: c2034ef18af2a4f53dc5a8c0df8155a8.dir + size: 118525022 + nfiles: 34 train-alt-neurites@in-L5-basal-image-tmd-proj-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/basal/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20741,13 +20741,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L5-basal-image-tmd-proj-decision-tree-stratified-k-fold - md5: bdf404d6799d44ad61e4ecf2fd16e6e5.dir - size: 43192690 - nfiles: 13 + md5: 42c4efbc77d340ba59af082e9d899dc6.dir + size: 118735205 + nfiles: 34 train-alt-neurites@in-L5-basal-image-tmd-rd-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/basal/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20761,13 +20761,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L5-basal-image-tmd-rd-xgb-stratified-k-fold - md5: 3746463bc85fccaca69d77c3b917bc8b.dir - size: 44930937 - nfiles: 13 + md5: f3f6b41e983f9d2e0d8b1aa25815facf.dir + size: 123705778 + nfiles: 34 train-alt-neurites@in-L5-basal-image-tmd-proj-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/basal/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20801,13 +20801,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-all-diagram-tmd-proj-perslay-stratified-k-fold - md5: fc7d7a30222b0abeb60526a5f010da64.dir - size: 3506095 - nfiles: 13 + md5: 2a3443c59f6d48a7c8335e327ad5f67b.dir + size: 9553466 + nfiles: 34 train-alt-neurites@in-L1-all-graph-proj-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/all/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20841,13 +20841,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-all-image-tmd-proj-cnn-stratified-k-fold - md5: 7d651c1d9cf13df0fe712dfce7547a97.dir - size: 6676952 - nfiles: 13 + md5: 9849e761fc77371f2ea864a5b8b7ecc1.dir + size: 18320168 + nfiles: 34 train-alt-neurites@in-L1-all-image-tmd-proj-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/all/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20881,13 +20881,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-all-image-tmd-proj-xgb-stratified-k-fold - md5: e61c008fbb3d47ee4026f23c89d5efe8.dir - size: 41335290 - nfiles: 13 + md5: d7099750d1c8053a3e206686785d8928.dir + size: 113841959 + nfiles: 34 train-alt-neurites@in-L1-basal-diagram-tmd-proj-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/basal/diagram-tmd-proj --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20941,13 +20941,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-basal-image-tmd-proj-cnn-stratified-k-fold - md5: af28a9e88537131db4df9df3fc348519.dir - size: 6680180 - nfiles: 13 + md5: 61f046ab5ffb80dd1ec92804df9fa6f9.dir + size: 18305419 + nfiles: 34 train-alt-neurites@in-L1-basal-image-tmd-proj-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/basal/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20981,13 +20981,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-basal-image-tmd-proj-xgb-stratified-k-fold - md5: ce5a556ff68917d8d00b855cc9e4941c.dir - size: 44030630 - nfiles: 13 + md5: 4f72fd5ced90278da33490feae3e81e9.dir + size: 121293284 + nfiles: 34 train-alt-neurites@in-L23-all-diagram-tmd-proj-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/all/diagram-tmd-proj --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21001,13 +21001,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L23-all-diagram-tmd-proj-perslay-stratified-k-fold - md5: b57e30d1cdbe49433c426ed35475142e.dir - size: 3612799 - nfiles: 13 + md5: a8f201834e3171ebbf279abac7d18f74.dir + size: 9829583 + nfiles: 34 train-alt-neurites@in-L23-all-graph-proj-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/all/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21041,13 +21041,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L23-all-image-tmd-proj-cnn-stratified-k-fold - md5: 4d2ea232bb1da1b5486eb4b6d601fa26.dir - size: 8342437 - nfiles: 13 + md5: 739e930e73b170dc2eb3fc7dadfb3ee6.dir + size: 22806574 + nfiles: 34 train-alt-neurites@in-L23-all-image-tmd-proj-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/all/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21081,13 +21081,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L23-all-image-tmd-proj-xgb-stratified-k-fold - md5: 32a13742c58d7f84ca89c01220fcc624.dir - size: 61188009 - nfiles: 13 + md5: 6fb7f461f07102ed1ab612b699bea28a.dir + size: 168358526 + nfiles: 34 train-alt-neurites@in-L23-basal-diagram-tmd-proj-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/basal/diagram-tmd-proj --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21101,13 +21101,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L23-basal-diagram-tmd-proj-perslay-stratified-k-fold - md5: d5af04474285df511d15f262f54000ef.dir - size: 3612546 - nfiles: 13 + md5: 08f8b90691ad18368f83870567fcee5b.dir + size: 9829383 + nfiles: 34 train-alt-neurites@in-L23-basal-graph-proj-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/basal/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21121,13 +21121,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L23-basal-graph-proj-gnn-stratified-k-fold - md5: 5e0080b81286efff9d4f6266dfda21f2.dir - size: 10035624 - nfiles: 13 + md5: b1dab6c433110b49d0ba0c734a0b1c34.dir + size: 27477968 + nfiles: 34 train-alt-neurites@in-L23-basal-image-tmd-proj-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/basal/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21161,13 +21161,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L23-basal-image-tmd-proj-decision-tree-stratified-k-fold - md5: 0b0b77fe5c188ea50cadb4d61cedf666.dir - size: 59163003 - nfiles: 13 + md5: 87db5027db6bdcdd5a370e09aee8a1d6.dir + size: 162656867 + nfiles: 34 train-alt-neurites@in-L23-basal-image-tmd-proj-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/basal/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21181,13 +21181,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L23-basal-image-tmd-proj-xgb-stratified-k-fold - md5: 0b81774899fc7dee62ffc18c7f4770cf.dir - size: 61139017 - nfiles: 13 + md5: 42329b8ee820b8d4cd4cdfabc64fe967.dir + size: 168360559 + nfiles: 34 train-alt-neurites@in-L4-all-diagram-tmd-proj-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/all/diagram-tmd-proj --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21201,13 +21201,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-all-diagram-tmd-proj-perslay-stratified-k-fold - md5: 1f77a76fa5282963ae5d6f4a9ed1a165.dir - size: 3528160 - nfiles: 13 + md5: 6dc1cf8da0b484436d24aa9db9b431be.dir + size: 9613013 + nfiles: 34 train-alt-neurites@in-L4-all-graph-proj-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/all/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21221,13 +21221,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-all-graph-proj-gnn-stratified-k-fold - md5: 9832ab7fcb834afe5605f0c3950204c5.dir - size: 9647222 - nfiles: 13 + md5: 8c1f012805167ef7179d532041e5e15e.dir + size: 26432568 + nfiles: 34 train-alt-neurites@in-L4-all-image-tmd-proj-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/all/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21241,13 +21241,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-all-image-tmd-proj-cnn-stratified-k-fold - md5: a6cf6bdca1d50d8ab03b5b92232ce6a7.dir - size: 7006929 - nfiles: 13 + md5: e1bca91ec03332aab4f3a7128f935f1c.dir + size: 19171797 + nfiles: 34 train-alt-neurites@in-L4-all-image-tmd-proj-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/all/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21261,13 +21261,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-all-image-tmd-proj-decision-tree-stratified-k-fold - md5: bd47d94ea040dfc121a79d3f00086476.dir - size: 44016739 - nfiles: 13 + md5: a129b8099bd9c797d91ab7cc5ecfa76c.dir + size: 120991443 + nfiles: 34 train-alt-neurites@in-L4-all-image-tmd-proj-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/all/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21301,13 +21301,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-basal-diagram-tmd-proj-perslay-stratified-k-fold - md5: 04396dfc6a20a4fbe98ff3bf57361063.dir - size: 3527260 - nfiles: 13 + md5: 25c2d585c0b1c58dc1ffe5494741c26e.dir + size: 9616283 + nfiles: 34 train-alt-neurites@in-L4-basal-graph-proj-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/basal/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21341,13 +21341,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-basal-image-tmd-proj-cnn-stratified-k-fold - md5: 62e17f05005cb640fd9c9075b3c2ae8b.dir - size: 7002302 - nfiles: 13 + md5: fc037f06a4922ca250093d79e9106c9a.dir + size: 19175099 + nfiles: 34 train-alt-neurites@in-L4-basal-image-tmd-proj-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/basal/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21361,13 +21361,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-basal-image-tmd-proj-decision-tree-stratified-k-fold - md5: 44235dab71f6ecbc9e69ffc85f2da1a8.dir - size: 44769323 - nfiles: 13 + md5: f0e5abf7b3c6fb412967c29311d7a4e8.dir + size: 123053880 + nfiles: 34 train-alt-neurites@in-L4-basal-image-tmd-proj-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/basal/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21401,13 +21401,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L5-all-diagram-tmd-proj-perslay-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L5-all-image-tmd-proj-cnn-stratified-k-fold - md5: e6132a36f5c9e015accac90174271bf6.dir - size: 6937910 - nfiles: 13 + md5: 407e87eee794ba2e2e2e34205a7be1b0.dir + size: 19003062 + nfiles: 34 train-alt-neurites@in-L5-all-image-tmd-proj-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/all/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21461,13 +21461,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L5-all-image-tmd-proj-decision-tree-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-all-diagram-tmd-proj-perslay-stratified-k-fold - md5: dfc974cc398c4605e784dbf50fbf37fd.dir - size: 3432365 - nfiles: 13 + md5: 61a1cbef4231997bef6afa119da6dc40.dir + size: 9381733 + nfiles: 34 train-alt-neurites@in-L6-all-graph-proj-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/all/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21521,13 +21521,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-all-graph-proj-gnn-stratified-k-fold - md5: a761542906ebe797bcf8d55de909eb2c.dir - size: 9151373 - nfiles: 13 + md5: 5a324ae6c86bec0ef4990528e48875ea.dir + size: 25117375 + nfiles: 34 train-alt-neurites@in-L6-all-image-tmd-proj-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/all/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21621,13 +21621,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-basal-graph-proj-gnn-stratified-k-fold - md5: 2513874a6b023c58810b262a4b23fb4e.dir - size: 9150390 - nfiles: 13 + md5: d49a7058b79df96c128821af7543ce30.dir + size: 25117171 + nfiles: 34 train-alt-neurites@in-L6-basal-image-tmd-proj-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/basal/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21641,13 +21641,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-basal-image-tmd-proj-cnn-stratified-k-fold - md5: 74a8088b1559280c1593a66b303d1031.dir - size: 5327409 - nfiles: 13 + md5: a19f8490ef4e278e7d35fb92adcf955a.dir + size: 14625355 + nfiles: 34 train-alt-neurites@in-L6-basal-image-tmd-proj-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/basal/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21661,13 +21661,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-basal-image-tmd-proj-decision-tree-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-all-decision-tree-tmd-proj-stratified-k-fold - md5: a0de30798cedf40b80b28c3090579de8.dir - size: 150136274 - nfiles: 13 + md5: 72620c9736e83092fd926ab54ea46f2e.dir + size: 412636148 + nfiles: 34 train-lida-in-merged-all-proj@gnn-morphology-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/all/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21741,13 +21741,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-all-gnn-morphology-proj-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-all-xgb-tmd-proj-stratified-k-fold - md5: 3b92f22b32819f3c42aeacfc5f16ca79.dir - size: 152261973 - nfiles: 13 + md5: 4c0e1e2a750e7320c36ed06331d439e0.dir + size: 418993855 + nfiles: 34 train-lida-in-merged-basal-proj@cnn-tmd-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/basal/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21821,13 +21821,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-basal-decision-tree-tmd-proj-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-basal-perslay-tmd-proj-stratified-k-fold - md5: b3948fe62471337a8125346fdf03d3ef.dir - size: 3962924 - nfiles: 13 + md5: 99c6f0eb091811b13a25d23b1bd7bf7f.dir + size: 10681721 + nfiles: 34 train-lida-in-merged-basal-proj@xgb-tmd-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/basal/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21901,13 +21901,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-cnn-tmd-proj-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-perslay-tmd-proj-stratified-k-fold - md5: fc233669f644c61e22fb7aa13544c41a.dir - size: 3916606 - nfiles: 13 + md5: 058409156475048f0713eba6ffa301c1.dir + size: 10652811 + nfiles: 34 train-lida-in-merged-bc-merged-all-proj@xgb-tmd-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/all/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21981,13 +21981,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-xgb-tmd-proj-stratified-k-fold - md5: 24d05bc721620769b97addb4309f0c94.dir - size: 151562042 - nfiles: 13 + md5: b7af148106a657b6cf5c7c3ae8eb434a.dir + size: 416961900 + nfiles: 34 train-lida-in-merged-bc-merged-basal-proj@cnn-tmd-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/basal/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -22021,13 +22021,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-decision-tree-tmd-proj-stratified-k-fold - md5: c0ea0f73adde812761ce93dd6d1efaef.dir - size: 150409326 - nfiles: 13 + md5: b93d8756a673c183aa7a16ad7eee4523.dir + size: 413505816 + nfiles: 34 train-lida-in-merged-bc-merged-basal-proj@gnn-morphology-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/basal/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -22061,13 +22061,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-perslay-tmd-proj-stratified-k-fold - md5: 621f3a75ed80d20666f2a3552bdf3ce9.dir - size: 3917504 - nfiles: 13 + md5: 6b8f6d30f7e6bd4181eb657d1cbef261.dir + size: 10652815 + nfiles: 34 train-lida-in-merged-bc-merged-basal-proj@xgb-tmd-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/basal/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -22498,3 +22498,2719 @@ stages: - path: evaluation/pc-L2-axon-diagram-deepwalk-perslay-stratified-k-fold.html md5: 45863a9312538055d955f7992c745c9d size: 10383 + evaluate-lida-in-merged@cnn-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-cnn-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-cnn-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-cnn-deepwalk-stratified-k-fold/checkpoint.chk + md5: 4365c73b9514cbb3610f9ad95538c7b7 + size: 35852280 + outs: + - path: evaluation/checkpoints-lida/in-merged-cnn-deepwalk-stratified-k-fold + md5: 29ebb8469e8974035f7b2afb4cfa8d71.dir + size: 9005423 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-cnn-deepwalk-stratified-k-fold.html + md5: e84a60e15aa5b25b0bc4604cdbf9d9c1 + size: 12574 + evaluate-alt-neurites@in-L23-all-diagram-tmd-proj-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-all-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L23-all-diagram-tmd-proj-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-all-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + md5: 63c3e743d676798d93120a7e7dfe7088 + size: 751221 + outs: + - path: evaluation/in-L23-all-diagram-tmd-proj-perslay-stratified-k-fold + md5: 147218c44eb7544dbabf627b082eb21b.dir + size: 9078522 + nfiles: 33 + - path: evaluation/in-L23-all-diagram-tmd-proj-perslay-stratified-k-fold.html + md5: 3b37738ff6748241d1dbb29341dbd475 + size: 13352 + evaluate-alt-neurites@pc-L5-basal-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-basal-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-basal-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-basal-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: 4afd397bcac25900bf21e5ddff3c0cea + size: 13721404 + outs: + - path: evaluation/pc-L5-basal-image-tmd-rd-cnn-stratified-k-fold + md5: b93c7f3f77ee2bcdb6b27766cf6c47f6.dir + size: 8951291 + nfiles: 33 + - path: evaluation/pc-L5-basal-image-tmd-rd-cnn-stratified-k-fold.html + md5: ea3c1d0148bea5dece2253b96d1b597c + size: 10863 + evaluate@in-L4-axon-image-tmd-proj-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L4-axon-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L4-axon-image-tmd-proj-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L4-axon-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + md5: 8f74c49658443cf94fb753ccfacf9034 + size: 112272751 + outs: + - path: evaluation/in-L4-axon-image-tmd-proj-decision-tree-stratified-k-fold + md5: cb39ef78804ab9919c7fdfd210020cb5.dir + size: 9028441 + nfiles: 33 + - path: evaluation/in-L4-axon-image-tmd-proj-decision-tree-stratified-k-fold.html + md5: d883af744309aa8c81cc395d27f09bc7 + size: 13282 + evaluate-alt-neurites@in-L4-all-image-tmd-proj-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-all-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L4-all-image-tmd-proj-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-all-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + md5: 4b459b92b2b4bb2317d152749d5951e8 + size: 10154158 + outs: + - path: evaluation/in-L4-all-image-tmd-proj-cnn-stratified-k-fold + md5: 21a154b12001ccf3dabdfee4a3e214ce.dir + size: 9017799 + nfiles: 33 + - path: evaluation/in-L4-all-image-tmd-proj-cnn-stratified-k-fold.html + md5: 3d2a8ab9d91d6ae60ec1e7de66d8745b + size: 13239 + evaluate@in-L23-axon-image-tmd-proj-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L23-axon-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L23-axon-image-tmd-proj-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L23-axon-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + md5: e8011d30f28e1231308064f46cc0220b + size: 13729771 + outs: + - path: evaluation/in-L23-axon-image-tmd-proj-cnn-stratified-k-fold + md5: cb51d8faaa8ef90951d5c827ffb11920.dir + size: 9069660 + nfiles: 33 + - path: evaluation/in-L23-axon-image-tmd-proj-cnn-stratified-k-fold.html + md5: 0328e5ce6eacccf0cf6dc8f614ebe8c8 + size: 13252 + evaluate-lida-in-merged-bc-merged-all@cnn-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-cnn-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-cnn-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-cnn-deepwalk-stratified-k-fold/checkpoint.chk + md5: a3d1e26fc5b9c1a41d4fddebd31463fd + size: 35669419 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-cnn-deepwalk-stratified-k-fold + md5: 2f3883863df090ec0c9f694168262b77.dir + size: 9007999 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-cnn-deepwalk-stratified-k-fold.html + md5: 01b28bc2f823ae409d5254811b1e23e5 + size: 11577 + evaluate-alt-neurites@in-L6-all-diagram-tmd-proj-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-all-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L6-all-diagram-tmd-proj-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-all-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + md5: f996df770fa33c5be09e91856eb72e23 + size: 413118 + outs: + - path: evaluation/in-L6-all-diagram-tmd-proj-perslay-stratified-k-fold + md5: a6688c8a806855e4e664ab0f82c828c2.dir + size: 8968775 + nfiles: 33 + - path: evaluation/in-L6-all-diagram-tmd-proj-perslay-stratified-k-fold.html + md5: 539d9d9bd772ba3c7499d95a5ecf4356 + size: 11558 + evaluate-alt-neurites@pc-L6-basal-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-basal-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-basal-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-basal-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 988048d14b629d89d27d646ccc409d49 + size: 134961007 + outs: + - path: evaluation/pc-L6-basal-image-deepwalk-decision-tree-stratified-k-fold + md5: 5c29b0668530dfa2fa97b7df3a2e8927.dir + size: 8999213 + nfiles: 33 + - path: evaluation/pc-L6-basal-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 80cb39d40494598ef68c91c9384c05d0 + size: 12120 + evaluate-lida-in-merged-all@perslay-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-all-perslay-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-all-perslay-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-all-perslay-deepwalk-stratified-k-fold/checkpoint.chk + md5: 09cfa4f599a7115222ad691fda40cd03 + size: 1677228 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-perslay-deepwalk-stratified-k-fold + md5: 5471af273fd5ad691c54a1cc7564062e.dir + size: 9004262 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-perslay-deepwalk-stratified-k-fold.html + md5: c7fcf7dfe6edf289e6f93868056318de + size: 12711 + evaluate@in-L5-axon-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L5-axon-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L5-axon-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L5-axon-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: 6271e179ab2cf48592fcc00678f4406f + size: 593460 + outs: + - path: evaluation/in-L5-axon-diagram-deepwalk-perslay-stratified-k-fold + md5: 9aaf33bc138f0874e2f41a6b8c6e50e1.dir + size: 9026942 + nfiles: 33 + - path: evaluation/in-L5-axon-diagram-deepwalk-perslay-stratified-k-fold.html + md5: f2169c09198809a1b17d1b3b88af8ec1 + size: 13339 + evaluate-alt-neurites@in-L1-basal-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-basal-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L1-basal-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-basal-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: 6996cce6eb229ef4d13b6ca6468f60a5 + size: 564660 + outs: + - path: evaluation/in-L1-basal-diagram-deepwalk-perslay-stratified-k-fold + md5: afcb67e292bf26612086f06d8c6b1de9.dir + size: 8988904 + nfiles: 33 + - path: evaluation/in-L1-basal-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 00f1dbb821fc843ec572e5dcea4a023a + size: 12177 + evaluate-alt-neurites@pc-L6-all-graph-proj-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-all-graph-proj-gnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-all-graph-proj-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-all-graph-proj-gnn-stratified-k-fold/checkpoint.chk + md5: 48087bc28d08f1423b291893508d98ae + size: 17725367 + outs: + - path: evaluation/pc-L6-all-graph-proj-gnn-stratified-k-fold + md5: fc6b43e32b6645ecc70cb458d50d69db.dir + size: 8996554 + nfiles: 33 + - path: evaluation/pc-L6-all-graph-proj-gnn-stratified-k-fold.html + md5: b08aefad125d2fa02dbeb46ba823bc46 + size: 12093 + evaluate-lida-in-merged-bc-merged-all@decision-tree-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-decision-tree-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-decision-tree-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-decision-tree-tmd-stratified-k-fold/checkpoint.chk + md5: e7cac8592c061224d01c9b86533991e1 + size: 414555951 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-decision-tree-tmd-stratified-k-fold + md5: aaf0cd3584de36025fc52839b8c7ba88.dir + size: 9019584 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-decision-tree-tmd-stratified-k-fold.html + md5: e827822ed7efd0dd54f1ca3ba7298ffc + size: 11558 + evaluate-alt-neurites@in-L23-basal-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-basal-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L23-basal-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-basal-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: 05ed8b1d95dd582ff0db35319d016200 + size: 18403283 + outs: + - path: evaluation/in-L23-basal-graph-rd-gnn-stratified-k-fold + md5: 85813c3f9ebb9577dfde72e637ee2b93.dir + size: 9079447 + nfiles: 33 + - path: evaluation/in-L23-basal-graph-rd-gnn-stratified-k-fold.html + md5: 501ddfd4b7d6797597047e1c0b04959b + size: 13294 + evaluate-janelia-L5-basal@cnn-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-basal-cnn-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-cnn-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-basal-cnn-deepwalk-stratified-k-fold/checkpoint.chk + md5: eedd2a654021d8cb9dfe3d047764d0ae + size: 5243758 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-cnn-deepwalk-stratified-k-fold + md5: 645dffec9b4ed4d7f602f5e4d2c92772.dir + size: 8949547 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-cnn-deepwalk-stratified-k-fold.html + md5: 61781281cf2dd8fa86474a4746de86b7 + size: 10892 + evaluate-alt-neurites@in-L5-basal-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-basal-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L5-basal-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-basal-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: fa1faace73161422197fbd3ba288f711 + size: 9987495 + outs: + - path: evaluation/in-L5-basal-image-deepwalk-cnn-stratified-k-fold + md5: 412adefe789fb4fce3d33b32ccf3bf89.dir + size: 9011450 + nfiles: 33 + - path: evaluation/in-L5-basal-image-deepwalk-cnn-stratified-k-fold.html + md5: 6453a0f917e7dfdff436170bdf2999ad + size: 13265 + evaluate@in-L1-axon-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L1-axon-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L1-axon-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L1-axon-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: dc88b2265c7d8ac80d49eec2aedad56f + size: 564848 + outs: + - path: evaluation/in-L1-axon-diagram-tmd-rd-perslay-stratified-k-fold + md5: e8bcb926bd7422cfb79320d2f394ac40.dir + size: 8988904 + nfiles: 33 + - path: evaluation/in-L1-axon-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: 5f5881e8dd4cad76d7ec8352c288498c + size: 12125 + evaluate-alt-neurites@pc-L3-axon-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-axon-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-axon-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-axon-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: d01edcee87cada9e294bee2121ef02cc + size: 3912691 + outs: + - path: evaluation/pc-L3-axon-image-tmd-rd-cnn-stratified-k-fold + md5: 8a392e0e2136f015f71e22eaee909cbc.dir + size: 8902575 + nfiles: 33 + - path: evaluation/pc-L3-axon-image-tmd-rd-cnn-stratified-k-fold.html + md5: e78913419f188b2dd7d6395b61080fd2 + size: 9662 + evaluate-lida-in-merged@cnn-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-cnn-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-cnn-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-cnn-tmd-stratified-k-fold/checkpoint.chk + md5: 63294eea5668b964dd60ee1180d6569c + size: 35848622 + outs: + - path: evaluation/checkpoints-lida/in-merged-cnn-tmd-stratified-k-fold + md5: cb1bd5d299283d874a2dcc36fc61ec26.dir + size: 9004879 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-cnn-tmd-stratified-k-fold.html + md5: 9e30b9e31bdb627f9f5113e2a3d33a3c + size: 12513 + evaluate-lida-in-merged-bc-merged@xgb-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-bc-merged-xgb-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-bc-merged-xgb-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-bc-merged-xgb-deepwalk-stratified-k-fold/checkpoint.chk + md5: 281ef87d192c34f167ef52011476c60b + size: 450765743 + outs: + - path: evaluation/checkpoints-lida/in-merged-bc-merged-xgb-deepwalk-stratified-k-fold + md5: b067731586df24255759ea956d779686.dir + size: 9012869 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-bc-merged-xgb-deepwalk-stratified-k-fold.html + md5: c51a0930104859389778ad0677147db9 + size: 11509 + evaluate-alt-neurites@pc-L2-all-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-all-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-all-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-all-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: 642581d2e3f4d1993df7220016783902 + size: 341997 + outs: + - path: evaluation/pc-L2-all-diagram-deepwalk-perslay-stratified-k-fold + md5: 228de6acc47cc439443c840cf789c7b5.dir + size: 8923395 + nfiles: 33 + - path: evaluation/pc-L2-all-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 8502bcba681ee0ec370cd20d048c2fb5 + size: 10370 + evaluate@in-L6-axon-image-tmd-proj-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L6-axon-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L6-axon-image-tmd-proj-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L6-axon-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + md5: 7ef38d47ba96296baeb5f4452c0f6912 + size: 5660202 + outs: + - path: evaluation/in-L6-axon-image-tmd-proj-cnn-stratified-k-fold + md5: 0398ad55d6205067d470bddffeb89d4d.dir + size: 8980609 + nfiles: 33 + - path: evaluation/in-L6-axon-image-tmd-proj-cnn-stratified-k-fold.html + md5: 30d80ba1505832518511215ffa24ddb9 + size: 11457 + evaluate@pc-L2-apical-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L2-apical-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-apical-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L2-apical-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: 4169214e73bab1726ea41e0f998dc57a + size: 45794159 + outs: + - path: evaluation/pc-L2-apical-image-deepwalk-xgb-stratified-k-fold + md5: c0ec2d0f5f19ee4234fe66345717b2ca.dir + size: 8916626 + nfiles: 33 + - path: evaluation/pc-L2-apical-image-deepwalk-xgb-stratified-k-fold.html + md5: 7fff712d82926f9c2ed8eb4ff9f0b2d8 + size: 10287 + evaluate-lida-in-merged-bc-merged-all-proj@cnn-tmd-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-cnn-tmd-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-cnn-tmd-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-cnn-tmd-proj-stratified-k-fold/checkpoint.chk + md5: b539c94dd32d390b7baf79315db8078c + size: 35667300 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-cnn-tmd-proj-stratified-k-fold + md5: 0c174c6f62b34b6dac763622477f3f4d.dir + size: 9002299 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-cnn-tmd-proj-stratified-k-fold.html + md5: b9f9e491ec8516db7d07dc5670faec78 + size: 11577 + evaluate-alt-neurites@in-L4-basal-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-basal-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L4-basal-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-basal-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: a74c2e870fdea65ed38c5a5fc62cf217 + size: 10154469 + outs: + - path: evaluation/in-L4-basal-image-tmd-rd-cnn-stratified-k-fold + md5: 304daef8f8169e86ad781f76e6b26d1b.dir + size: 9014592 + nfiles: 33 + - path: evaluation/in-L4-basal-image-tmd-rd-cnn-stratified-k-fold.html + md5: c3e9b9e06505b4a3dee0226266122d7d + size: 13239 + evaluate-lida-in-merged-all-proj@perslay-tmd-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-all-perslay-tmd-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-all-perslay-tmd-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-all-perslay-tmd-proj-stratified-k-fold/checkpoint.chk + md5: 973e533194f01ea713b60f6523c25ff6 + size: 1676847 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-perslay-tmd-proj-stratified-k-fold + md5: 8dd82e924e0130ab0a1b15fd46ca089a.dir + size: 9004262 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-perslay-tmd-proj-stratified-k-fold.html + md5: 718bf0c3fa77ba9a21dd7d7ec03cb6e2 + size: 12711 + evaluate@pc-L2-apical-diagram-tmd-proj-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L2-apical-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-apical-diagram-tmd-proj-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L2-apical-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + md5: b85012822c77518930baad19984864a3 + size: 341996 + outs: + - path: evaluation/pc-L2-apical-diagram-tmd-proj-perslay-stratified-k-fold + md5: b2c01519258da3d7870fe553965a5e06.dir + size: 8923602 + nfiles: 33 + - path: evaluation/pc-L2-apical-diagram-tmd-proj-perslay-stratified-k-fold.html + md5: b8509e6fbee2ea7c5156159991fb679f + size: 10396 + evaluate-lida-in-merged-bc-merged-proj@xgb-tmd-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-bc-merged-xgb-tmd-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-bc-merged-xgb-tmd-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-bc-merged-xgb-tmd-proj-stratified-k-fold/checkpoint.chk + md5: ff7ea6d7a25ee7b59e5815204680f177 + size: 408650479 + outs: + - path: evaluation/checkpoints-lida/in-merged-bc-merged-xgb-tmd-proj-stratified-k-fold + md5: 4083ab7458215429519038581cf60ee1.dir + size: 9025730 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-bc-merged-xgb-tmd-proj-stratified-k-fold.html + md5: c8f1b79f272989a3ebfef6ebbdf66263 + size: 11509 + evaluate-alt-neurites@pc-L5-basal-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-basal-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-basal-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-basal-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: a81db59136c7730ac63538aad61b07d3 + size: 746113 + outs: + - path: evaluation/pc-L5-basal-diagram-deepwalk-perslay-stratified-k-fold + md5: 359ea011d6e379e0a48608df2e8227b2.dir + size: 8936285 + nfiles: 33 + - path: evaluation/pc-L5-basal-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 0b3d76fc31dd3e7841727070ed10324a + size: 10990 + evaluate-alt-neurites@pc-L4-all-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-all-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-all-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L4-all-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: 4f22525f48360f72c807064244b698b3 + size: 94934255 + outs: + - path: evaluation/pc-L4-all-image-tmd-rd-decision-tree-stratified-k-fold + md5: bcb5f04a64546c50e56d4a8b185e7cf1.dir + size: 8926960 + nfiles: 33 + - path: evaluation/pc-L4-all-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: 51891398d97b84498c82e7e1652e47c9 + size: 10286 + evaluate-alt-neurites@in-L6-all-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-all-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L6-all-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-all-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: fd36753da130f544345dbebe93404d78 + size: 413023 + outs: + - path: evaluation/in-L6-all-diagram-deepwalk-perslay-stratified-k-fold + md5: 91284183ada2e97a233a367e662268ee.dir + size: 8968775 + nfiles: 33 + - path: evaluation/in-L6-all-diagram-deepwalk-perslay-stratified-k-fold.html + md5: c9790d4653b03ef6722f22a34c5c63e9 + size: 11558 + evaluate-alt-neurites@in-L23-basal-graph-proj-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-basal-graph-proj-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L23-basal-graph-proj-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-basal-graph-proj-gnn-stratified-k-fold/checkpoint.chk + md5: 03059b1444baf42a5591fdb997739821 + size: 18403408 + outs: + - path: evaluation/in-L23-basal-graph-proj-gnn-stratified-k-fold + md5: f4deb193134347b6a2c3b34796da7c0a.dir + size: 9074720 + nfiles: 33 + - path: evaluation/in-L23-basal-graph-proj-gnn-stratified-k-fold.html + md5: 1816254c8eb6a393f749c95ade64dbb3 + size: 13320 + evaluate-alt-neurites@in-L23-all-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-all-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L23-all-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-all-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: bfca1a130edd013d7001200097249cd1 + size: 171518255 + outs: + - path: evaluation/in-L23-all-image-deepwalk-decision-tree-stratified-k-fold + md5: 8f948b8b0728849ec7e2040350491d62.dir + size: 9072315 + nfiles: 33 + - path: evaluation/in-L23-all-image-deepwalk-decision-tree-stratified-k-fold.html + md5: bbab801db47ce625795caa153c7b767b + size: 13295 + evaluate-alt-neurites@pc-L2-all-diagram-tmd-proj-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-all-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-all-diagram-tmd-proj-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-all-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + md5: c825eac02a7484e892a19014ee4bb8a8 + size: 342001 + outs: + - path: evaluation/pc-L2-all-diagram-tmd-proj-perslay-stratified-k-fold + md5: 3cb8435c2d67a989a42cee615375911f.dir + size: 8921544 + nfiles: 33 + - path: evaluation/pc-L2-all-diagram-tmd-proj-perslay-stratified-k-fold.html + md5: dd665935dd5857bb56011cfdf4c9e1cf + size: 10370 + evaluate-alt-neurites@in-L1-all-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-all-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L1-all-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-all-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: 84f106cdcff4fe073bb341d1c850f383 + size: 564782 + outs: + - path: evaluation/in-L1-all-diagram-deepwalk-perslay-stratified-k-fold + md5: d2746504a37b1d615cf9967b31b3a7ea.dir + size: 8988904 + nfiles: 33 + - path: evaluation/in-L1-all-diagram-deepwalk-perslay-stratified-k-fold.html + md5: dd9b8f7594cc5fecef504c3750b2e9a4 + size: 12151 + evaluate-alt-neurites@pc-L3-axon-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-axon-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-axon-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-axon-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: 7d8c81b04b78889e300bafb19955d94b + size: 46145135 + outs: + - path: evaluation/pc-L3-axon-image-deepwalk-xgb-stratified-k-fold + md5: 29601d762c88463799c6b1f5f9471519.dir + size: 8907995 + nfiles: 33 + - 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path: evaluation/pc-L2-all-image-tmd-proj-decision-tree-stratified-k-fold.html + md5: a19e0fb5e6782322292ba8f7918903df + size: 10312 + evaluate-alt-neurites@in-L23-all-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-all-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L23-all-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-all-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: 1d096f30428ae1da7e68bccde27130db + size: 160046703 + outs: + - path: evaluation/in-L23-all-image-tmd-rd-xgb-stratified-k-fold + md5: b4a7c2392e12117ce03f7a57466c26c2.dir + size: 9078057 + nfiles: 33 + - path: evaluation/in-L23-all-image-tmd-rd-xgb-stratified-k-fold.html + md5: 0630032bbd4316a4832bd4733252fd20 + size: 13218 + evaluate-janelia-L5-basal@cnn-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-basal-cnn-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-cnn-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-basal-cnn-tmd-stratified-k-fold/checkpoint.chk + md5: 923e60620fa7756b896382d09adb102c + size: 5243892 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-cnn-tmd-stratified-k-fold + md5: c77de4d36d0f2f57e442791aae53bd0d.dir + size: 8952410 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-cnn-tmd-stratified-k-fold.html + md5: f68c64c038bf3a315ff21ee02dabf0b0 + size: 10830 + evaluate-janelia-L5-all@cnn-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-all-cnn-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-cnn-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-all-cnn-deepwalk-stratified-k-fold/checkpoint.chk + md5: 0baa5bf177eb696f97a7aaf632410c6d + size: 5243753 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-cnn-deepwalk-stratified-k-fold + md5: fdae5231e895195813b616c463e17d18.dir + size: 8950516 + nfiles: 33 + - 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path: training/checkpoints-alt-neurites/pc-L4-all-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: ca2db8aa48967307f9c28f9b2aabee80 + size: 97113455 + outs: + - path: evaluation/pc-L4-all-image-tmd-rd-xgb-stratified-k-fold + md5: c14c7b31b3c6d589135381de933bd941.dir + size: 8919343 + nfiles: 33 + - path: evaluation/pc-L4-all-image-tmd-rd-xgb-stratified-k-fold.html + md5: c35e4dbf8eead1978a59e7a4514932bd + size: 10235 + evaluate-alt-neurites@in-L1-basal-image-tmd-proj-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-basal-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L1-basal-image-tmd-proj-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-basal-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + md5: 50b2e7c5436bddc335b84f00dc87dcf5 + size: 9319276 + outs: + - path: evaluation/in-L1-basal-image-tmd-proj-cnn-stratified-k-fold + md5: 5fb622a0aa1cf8e3807d34962ba22004.dir + size: 8986303 + nfiles: 33 + - 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path: training/checkpoints-alt-neurites/in-L4-basal-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + md5: 0768919d1e984957ba7f84a351502be9 + size: 600313 + outs: + - path: evaluation/in-L4-basal-diagram-tmd-proj-perslay-stratified-k-fold + md5: 6bd13f0655e79d270f0400ca61dda588.dir + size: 9016130 + nfiles: 33 + - path: evaluation/in-L4-basal-diagram-tmd-proj-perslay-stratified-k-fold.html + md5: f109735e66a3b36c3a53bcaa5102aa67 + size: 13365 + evaluate-alt-neurites@in-L23-all-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-all-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L23-all-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-all-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: 9618ba6d574405a392d04afa8d3e1e9f + size: 177113583 + outs: + - path: evaluation/in-L23-all-image-deepwalk-xgb-stratified-k-fold + md5: dfdb8162ceefe78973255d09c86c9b8a.dir + size: 9070987 + nfiles: 33 + - path: evaluation/in-L23-all-image-deepwalk-xgb-stratified-k-fold.html + md5: 24d7d9bfee476cb1be794f49513156bd + size: 13244 + evaluate-janelia-L5-basal@perslay-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-basal-perslay-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-perslay-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-basal-perslay-tmd-stratified-k-fold/checkpoint.chk + md5: c816c676c033fb120306e893c5327cb8 + size: 396215 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-perslay-tmd-stratified-k-fold + md5: 606f6c6c3445f2e4dbdb6f368c07d179.dir + size: 8943327 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-perslay-tmd-stratified-k-fold.html + md5: 4d6b2e7a9c6ae41c27dd2f006dc1f3e8 + size: 10907 + evaluate@pc-L3-apical-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L3-apical-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-apical-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L3-apical-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: 2c5eb561669082a95c701093ea2c0b13 + size: 3912500 + outs: + - path: evaluation/pc-L3-apical-image-tmd-rd-cnn-stratified-k-fold + md5: dbf3d69c5d81b772864205862bb1879c.dir + size: 8906878 + nfiles: 33 + - path: evaluation/pc-L3-apical-image-tmd-rd-cnn-stratified-k-fold.html + md5: 0f734f03f01d842979dd344481a701cc + size: 9675 + evaluate@in-L5-axon-graph-proj-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L5-axon-graph-proj-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L5-axon-graph-proj-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L5-axon-graph-proj-gnn-stratified-k-fold/checkpoint.chk + md5: 9e2d264cec87aaeeb42afca95caf6a4f + size: 17358284 + outs: + - path: evaluation/in-L5-axon-graph-proj-gnn-stratified-k-fold + md5: 7dd6129be6642ecdcf4fc7615e270b2b.dir + size: 9022933 + nfiles: 33 + - path: evaluation/in-L5-axon-graph-proj-gnn-stratified-k-fold.html + md5: c87bbc56042869531122816e4ff5dfe2 + size: 13281 + evaluate-lida-in-merged-bc-merged-basal-proj@decision-tree-tmd-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-decision-tree-tmd-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-decision-tree-tmd-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-decision-tree-tmd-proj-stratified-k-fold/checkpoint.chk + md5: 6d8e46fb7e8e9cf959a0afb443ad1879 + size: 404493359 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-decision-tree-tmd-proj-stratified-k-fold + md5: 8808dfbcb5011990d968c63b116c3e97.dir + size: 9012617 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-decision-tree-tmd-proj-stratified-k-fold.html + md5: 3fed8619da9d8f28c17cd06d52cba93d + size: 11646 + evaluate-alt-neurites@in-L5-all-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-all-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L5-all-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-all-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: d02103b879c81869e2ebf9671dab9857 + size: 593619 + outs: + - path: evaluation/in-L5-all-diagram-deepwalk-perslay-stratified-k-fold + md5: cecbadc14ca141a18470538a22df6b50.dir + size: 9026942 + nfiles: 33 + - path: evaluation/in-L5-all-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 7380dd0984c017519672716d785ce524 + size: 13339 + evaluate@in-L6-axon-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L6-axon-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L6-axon-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L6-axon-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: 6883fc26b6dd3de2660cdf632e5015f3 + size: 65473263 + outs: + - path: evaluation/in-L6-axon-image-tmd-rd-xgb-stratified-k-fold + md5: d01733f347dcb10c19b58d5cab0c69e8.dir + size: 8970051 + nfiles: 33 + - path: evaluation/in-L6-axon-image-tmd-rd-xgb-stratified-k-fold.html + md5: 7615412962622ea036d1d39cafc9cb08 + size: 11423 + evaluate-lida-in-merged-basal@perslay-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-basal-perslay-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-basal-perslay-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-basal-perslay-tmd-stratified-k-fold/checkpoint.chk + md5: 24837fab90bd669ad78194e043857169 + size: 1677369 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-perslay-tmd-stratified-k-fold + md5: 3062b7697ca8b21fe4441152cfe24b5b.dir + size: 9004262 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-perslay-tmd-stratified-k-fold.html + md5: b7f53e2aae668d2a3003b0eb5682a5d9 + size: 12675 + evaluate@in-L5-axon-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L5-axon-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L5-axon-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L5-axon-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: 8ff1e605157c51a7c136b1869043b019 + size: 17358222 + outs: + - path: evaluation/in-L5-axon-graph-rd-gnn-stratified-k-fold + md5: 2be47014a28728e0065b5197332f7135.dir + size: 9023577 + nfiles: 33 + - path: evaluation/in-L5-axon-graph-rd-gnn-stratified-k-fold.html + md5: 52682aa2a2f06f00afbd2b15e9799cf7 + size: 13255 + evaluate-alt-neurites@in-L4-basal-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-basal-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L4-basal-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-basal-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: d31a569df2d75953aa63dd5369db0648 + size: 600443 + outs: + - path: evaluation/in-L4-basal-diagram-tmd-rd-perslay-stratified-k-fold + md5: d227aa8b00f6db08de1b48f96c64948b.dir + size: 9012869 + nfiles: 33 + - path: evaluation/in-L4-basal-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: 285730f1e7450badcdd165c0137bda43 + size: 13339 + evaluate@in-L1-axon-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L1-axon-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L1-axon-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L1-axon-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: cbb8177d056d43166fb9ee5abf15dadb + size: 110133231 + outs: + - path: evaluation/in-L1-axon-image-deepwalk-decision-tree-stratified-k-fold + md5: d6d1d9952ddb63f58b59c3880e849b94.dir + size: 8983735 + nfiles: 33 + - path: evaluation/in-L1-axon-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 2fb7c10b74a6dc255afe00fd99550591 + size: 12094 + evaluate-alt-neurites@pc-L2-basal-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-basal-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-basal-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-basal-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: 4b899ddc6f4118c5edcffe81e3aeaed0 + size: 342083 + outs: + - path: evaluation/pc-L2-basal-diagram-deepwalk-perslay-stratified-k-fold + md5: 1961a9c166c218aed2a005c2281a3f36.dir + size: 8919923 + nfiles: 33 + - path: evaluation/pc-L2-basal-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 0cfb128b85a5471fe767156968a138e9 + size: 10396 + evaluate@in-L4-axon-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L4-axon-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L4-axon-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L4-axon-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: 641d8f7432c10adace8be12456c82ff7 + size: 117357423 + outs: + - path: evaluation/in-L4-axon-image-tmd-rd-xgb-stratified-k-fold + md5: 624916e3ddff1ebb37d9d32828606969.dir + size: 9027283 + nfiles: 33 + - path: evaluation/in-L4-axon-image-tmd-rd-xgb-stratified-k-fold.html + md5: 1c57a9c45218ba7560c48fbdb26d8b4a + size: 13205 + evaluate-lida-in-merged-bc-merged-basal@xgb-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-xgb-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-xgb-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-xgb-tmd-stratified-k-fold/checkpoint.chk + md5: 5e82cf89dc09da5467dd2ce910d972f8 + size: 415444143 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-xgb-tmd-stratified-k-fold + md5: 0ede1d2a235aa694670e009d798886ca.dir + size: 9001956 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-xgb-tmd-stratified-k-fold.html + md5: 8d5c0e920af426e60097f10da7a28780 + size: 11533 + evaluate-alt-neurites@in-L5-all-image-tmd-proj-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-all-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L5-all-image-tmd-proj-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-all-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + md5: 22611ef107965c8c4b728e19fc425c70 + size: 9986925 + outs: + - path: evaluation/in-L5-all-image-tmd-proj-cnn-stratified-k-fold + md5: 023b5eeb181822a63cb7c50ac40e8c92.dir + size: 9016297 + nfiles: 33 + - path: evaluation/in-L5-all-image-tmd-proj-cnn-stratified-k-fold.html + md5: 3281ba9b1944231ccc5f2d6b27c4ee68 + size: 13239 + evaluate-alt-neurites@in-L1-all-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-all-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L1-all-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-all-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: bb322f93d0a5908012a0770ab9af5131 + size: 115533103 + outs: + - path: evaluation/in-L1-all-image-deepwalk-decision-tree-stratified-k-fold + md5: 2bd32c0876d9606f1dfcabaf3d75a4d3.dir + size: 8985079 + nfiles: 33 + - path: evaluation/in-L1-all-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 415c5eee009a58691a24cb3a0e854498 + size: 12094 + evaluate@in-L6-axon-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L6-axon-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L6-axon-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L6-axon-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: 42d29d0a2b8652b9eb8b56366bab143e + size: 68443503 + outs: + - path: evaluation/in-L6-axon-image-deepwalk-xgb-stratified-k-fold + md5: 3a93d569b40adc259bc31015416711c5.dir + size: 8975928 + nfiles: 33 + - path: evaluation/in-L6-axon-image-deepwalk-xgb-stratified-k-fold.html + md5: a0ff7b86c19bd57b9e3801728d4cd0db + size: 11449 + evaluate@in-L1-axon-image-tmd-proj-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L1-axon-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L1-axon-image-tmd-proj-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L1-axon-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + md5: 3e44fc75e3cc12dd9c513e2e6f13ee90 + size: 101296751 + outs: + - path: evaluation/in-L1-axon-image-tmd-proj-decision-tree-stratified-k-fold + md5: 45f41048dc008fdf23c7a994fb12dcdb.dir + size: 9004207 + nfiles: 33 + - path: evaluation/in-L1-axon-image-tmd-proj-decision-tree-stratified-k-fold.html + md5: 5251708829809026da2f1b6da8bb00e3 + size: 12094 + evaluate@in-L4-axon-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L4-axon-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L4-axon-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L4-axon-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: ef5682cae40bbff16c68a6bbfa1b41c0 + size: 119144623 + outs: + - path: evaluation/in-L4-axon-image-deepwalk-decision-tree-stratified-k-fold + md5: 5dc73aba515aa05630b98620fc141019.dir + size: 9017058 + nfiles: 33 + - path: evaluation/in-L4-axon-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 9929331877ad7a2c4de07d769de8d69c + size: 13282 + evaluate-alt-neurites@in-L4-basal-image-tmd-proj-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-basal-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L4-basal-image-tmd-proj-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-basal-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + md5: cc8f0e5fec9db505523c1fadd5117e3a + size: 10154289 + outs: + - path: evaluation/in-L4-basal-image-tmd-proj-cnn-stratified-k-fold + md5: 1a2b25f18e5e15ab69cc94f58829daef.dir + size: 9020970 + nfiles: 33 + - path: evaluation/in-L4-basal-image-tmd-proj-cnn-stratified-k-fold.html + md5: b29088e200abf5229dbc95de53013f93 + size: 13265 + evaluate@in-L1-axon-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L1-axon-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L1-axon-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L1-axon-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: 3ff446ff1e66e485722d625f61f17581 + size: 114377263 + outs: + - path: evaluation/in-L1-axon-image-deepwalk-xgb-stratified-k-fold + md5: 3f4e37e323e99f94099f0f87c3cde460.dir + size: 8991310 + nfiles: 33 + - path: evaluation/in-L1-axon-image-deepwalk-xgb-stratified-k-fold.html + md5: f517943387e774c369456a68ca4be3c4 + size: 12043 + evaluate@pc-L6-apical-graph-proj-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L6-apical-graph-proj-gnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-apical-graph-proj-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L6-apical-graph-proj-gnn-stratified-k-fold/checkpoint.chk + md5: 0473a1837fe5cf270cd9d0306523a6b1 + size: 17724953 + outs: + - path: evaluation/pc-L6-apical-graph-proj-gnn-stratified-k-fold + md5: 5e37951e5227516226d98b444a0227cf.dir + size: 8997314 + nfiles: 33 + - path: evaluation/pc-L6-apical-graph-proj-gnn-stratified-k-fold.html + md5: bac9f01519898607ecee10242f6c67bd + size: 12119 + evaluate-alt-neurites@in-L4-all-diagram-tmd-proj-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-all-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L4-all-diagram-tmd-proj-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-all-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + md5: f171d90da2ea9bf30252c997a33c9d1c + size: 600304 + outs: + - path: evaluation/in-L4-all-diagram-tmd-proj-perslay-stratified-k-fold + md5: da205e0879d5e7b3855e7201884d8864.dir + size: 9012869 + nfiles: 33 + - path: evaluation/in-L4-all-diagram-tmd-proj-perslay-stratified-k-fold.html + md5: 3ae84eb579b8e90b8ebb92abcdfbd092 + size: 13339 + evaluate-lida-in-merged-bc-merged-all@decision-tree-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-decision-tree-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-decision-tree-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-decision-tree-deepwalk-stratified-k-fold/checkpoint.chk + md5: 1c03970e727beb52895f555e1987bb3e + size: 464997039 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-decision-tree-deepwalk-stratified-k-fold + md5: ef2acd9aca2ba535693fbb4bc2775ac6.dir + size: 9002742 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-decision-tree-deepwalk-stratified-k-fold.html + md5: 34f905aeb0602e848dcce1aec0758f70 + size: 11620 + evaluate-lida-in-merged-all@decision-tree-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-all-decision-tree-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-all-decision-tree-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-all-decision-tree-deepwalk-stratified-k-fold/checkpoint.chk + md5: a040bacf6432137ff8addf0b85d4f5fa + size: 465148207 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-decision-tree-deepwalk-stratified-k-fold + md5: dc58c036ec5eba4766b292abf91756fc.dir + size: 9000259 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-decision-tree-deepwalk-stratified-k-fold.html + md5: 073aafa7164c49ddd62c062dc202945f + size: 12678 + evaluate@pc-L4-apical-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L4-apical-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-apical-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L4-apical-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: 5522e245da171246aeaf049bab3410d0 + size: 95613871 + outs: + - path: evaluation/pc-L4-apical-image-tmd-rd-decision-tree-stratified-k-fold + md5: 477079295ded1d632f01e4e6d848349d.dir + size: 8923145 + nfiles: 33 + - path: evaluation/pc-L4-apical-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: 426cc676f617eb98c0076d80a8a5b0d8 + size: 10312 + evaluate-alt-neurites@in-L6-basal-image-tmd-proj-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-basal-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L6-basal-image-tmd-proj-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-basal-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + md5: 954fbe06e45a120fd10490c77e2df42c + size: 63847919 + outs: + - path: evaluation/in-L6-basal-image-tmd-proj-decision-tree-stratified-k-fold + md5: 50e4c6bc541a0388d27f7c4ee7f9f499.dir + size: 8969389 + nfiles: 33 + - path: evaluation/in-L6-basal-image-tmd-proj-decision-tree-stratified-k-fold.html + md5: ae35b5ccc2c747a91ac869519148803f + size: 11526 + evaluate-alt-neurites@in-L1-all-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-all-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L1-all-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-all-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: ae7521a9b46b3d72c791b640edb6e8f9 + size: 112087151 + outs: + - path: evaluation/in-L1-all-image-tmd-rd-xgb-stratified-k-fold + md5: 04d12edaf908816229cf37c33c4a945d.dir + size: 8993552 + nfiles: 33 + - path: evaluation/in-L1-all-image-tmd-rd-xgb-stratified-k-fold.html + md5: 46742a4cb7529b76271045f206bdb86e + size: 12017 + evaluate-janelia-L5-basal@perslay-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-basal-perslay-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-perslay-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-basal-perslay-deepwalk-stratified-k-fold/checkpoint.chk + md5: 410d4da8c8cf71b22e93dbee06c23f17 + size: 396216 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-perslay-deepwalk-stratified-k-fold + md5: acb15882f833a2e7de336e0a4a015524.dir + size: 8943327 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-perslay-deepwalk-stratified-k-fold.html + md5: 5df5bf6c6c4b0d1f96bb09740c134d69 + size: 10969 + evaluate-alt-neurites@pc-L4-all-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-all-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-all-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L4-all-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 66d4113f3e70b659017fada0d30aaec9 + size: 98004847 + outs: + - path: evaluation/pc-L4-all-image-deepwalk-decision-tree-stratified-k-fold + md5: 089acd83232f4e69ef93ec885c536ead.dir + size: 8914396 + nfiles: 33 + - path: evaluation/pc-L4-all-image-deepwalk-decision-tree-stratified-k-fold.html + md5: c38f4a2c8c4aeb2516ab7e565b4fec6e + size: 10312 + evaluate-alt-neurites@pc-L4-all-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-all-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-all-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L4-all-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: e1c207e9c875855241e2415a39209b92 + size: 7735468 + outs: + - path: evaluation/pc-L4-all-image-deepwalk-cnn-stratified-k-fold + md5: b7daf487be512f9e82651bf8c55492ad.dir + size: 8925435 + nfiles: 33 + - path: evaluation/pc-L4-all-image-deepwalk-cnn-stratified-k-fold.html + md5: 7e33af8aee9d72b912f9f6fbf5b5dca9 + size: 10269 + evaluate@in-L1-axon-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L1-axon-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L1-axon-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L1-axon-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: 870b39e28f29b77eeb1d3b6c2c349935 + size: 17170458 + outs: + - path: evaluation/in-L1-axon-graph-rd-gnn-stratified-k-fold + md5: c63aec060131360111ad97dfabec291e.dir + size: 8992082 + nfiles: 33 + - path: evaluation/in-L1-axon-graph-rd-gnn-stratified-k-fold.html + md5: c3fbf31f1ef0fdda038eae59152fef02 + size: 12067 + evaluate-alt-neurites@in-L4-all-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-all-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L4-all-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-all-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: dcda33963d7281a1798c121b02667e48 + size: 10154670 + outs: + - path: evaluation/in-L4-all-image-deepwalk-cnn-stratified-k-fold + md5: d34cfe0656d56243ca177b254524282c.dir + size: 9026486 + nfiles: 33 + - path: evaluation/in-L4-all-image-deepwalk-cnn-stratified-k-fold.html + md5: eb3fe24a247a3b518cb8d0d481052e88 + size: 13239 + evaluate-alt-neurites@in-L23-basal-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-basal-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L23-basal-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-basal-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: 8c2e8e27689d664b75d55253e4c6f06d + size: 13731116 + outs: + - path: evaluation/in-L23-basal-image-tmd-rd-cnn-stratified-k-fold + md5: d946fade9f430859e08dfb994847b813.dir + size: 9067400 + nfiles: 33 + - path: evaluation/in-L23-basal-image-tmd-rd-cnn-stratified-k-fold.html + md5: 0c7354a238c651658372c4bef8dc6456 + size: 13252 + evaluate-alt-neurites@pc-L4-basal-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-basal-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-basal-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L4-basal-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: ae20718dfea72f51598ce19e1a25bbd7 + size: 499064 + outs: + - path: evaluation/pc-L4-basal-diagram-tmd-rd-perslay-stratified-k-fold + md5: 93f8daa2075ec4edbc1d293bc06c53a8.dir + size: 8925479 + nfiles: 33 + - path: evaluation/pc-L4-basal-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: 5a7417e5c80e9e93ac0919532fe82dd3 + size: 10370 + evaluate@in-L6-axon-image-tmd-proj-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L6-axon-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L6-axon-image-tmd-proj-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L6-axon-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + md5: 32753e9c36bb432bd013a7ba8c9f1767 + size: 65174575 + outs: + - path: evaluation/in-L6-axon-image-tmd-proj-xgb-stratified-k-fold + md5: 062464bb2ec93a68c26748e0557e3cff.dir + size: 8976754 + nfiles: 33 + - path: evaluation/in-L6-axon-image-tmd-proj-xgb-stratified-k-fold.html + md5: 647fb97aca49a017df5a8c694bae4444 + size: 11449 + evaluate-alt-neurites@pc-L5-basal-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-basal-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-basal-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-basal-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: 2674297549b428b0495ab670e7d1962d + size: 177705903 + outs: + - path: evaluation/pc-L5-basal-image-deepwalk-xgb-stratified-k-fold + md5: 51b8e8a0f36a47e811ec60afe4a12524.dir + size: 8951115 + nfiles: 33 + - path: evaluation/pc-L5-basal-image-deepwalk-xgb-stratified-k-fold.html + md5: 25f1c84c6261bf6dbf6359e38572877b + size: 10881 + evaluate-alt-neurites@pc-L3-axon-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-axon-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-axon-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-axon-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: cbed625f9c4ab81feb6b1ee14014b6f1 + size: 47076975 + outs: + - path: evaluation/pc-L3-axon-image-tmd-rd-decision-tree-stratified-k-fold + md5: 561e2e40a68fb136973313596cb53ed9.dir + size: 8913111 + nfiles: 33 + - path: evaluation/pc-L3-axon-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: 1f65f921cb940f1be4d616a4f3ea5922 + size: 9705 + evaluate-lida-in-merged-bc-merged-all@perslay-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-perslay-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-perslay-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-perslay-tmd-stratified-k-fold/checkpoint.chk + md5: abb73327b4c3a09ba820640df2acbc24 + size: 1656384 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-perslay-tmd-stratified-k-fold + md5: 0d98b2b12de5defb7662e6fef673d206.dir + size: 8996596 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-perslay-tmd-stratified-k-fold.html + md5: f36b55eee16a09edb8679963690b8913 + size: 11592 + evaluate-lida-in-merged-bc-merged-basal@xgb-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-xgb-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-xgb-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-xgb-deepwalk-stratified-k-fold/checkpoint.chk + md5: 76bbbd1eb0745728810b92d9ffdbd7ed + size: 457123887 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-xgb-deepwalk-stratified-k-fold + md5: d04ebb803757c0e8107dded059585c63.dir + size: 9026986 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-xgb-deepwalk-stratified-k-fold.html + md5: 1a50763b68d32b544ee67a84f8c55501 + size: 11595 + evaluate-alt-neurites@in-L4-basal-image-tmd-proj-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-basal-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L4-basal-image-tmd-proj-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-basal-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + md5: 421a05687677b753436f99e9272984ab + size: 114026927 + outs: + - path: evaluation/in-L4-basal-image-tmd-proj-decision-tree-stratified-k-fold + md5: 7d6eaa76c1d482583dd613036664ed1c.dir + size: 9027113 + nfiles: 33 + - path: evaluation/in-L4-basal-image-tmd-proj-decision-tree-stratified-k-fold.html + md5: 1012dbf7d4102ac5ca21197906e22819 + size: 13308 + evaluate@in-L5-axon-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L5-axon-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L5-axon-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L5-axon-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: c8f208717a2651b528273ae5b7244d90 + size: 593459 + outs: + - path: evaluation/in-L5-axon-diagram-tmd-rd-perslay-stratified-k-fold + md5: 1d55bb478bdcb825c38fa54b5947c5fe.dir + size: 9026942 + nfiles: 33 + - path: evaluation/in-L5-axon-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: a735bc5740365b49f1dbd4a6dc065b9f + size: 13313 + evaluate@in-L23-axon-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L23-axon-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L23-axon-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L23-axon-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 84d4684a06cf07dd41c2d1f18f9098a0 + size: 164271407 + outs: + - path: evaluation/in-L23-axon-image-deepwalk-decision-tree-stratified-k-fold + md5: 029b3c22e16ca36369b076d3ec9871b4.dir + size: 9064244 + nfiles: 33 + - path: evaluation/in-L23-axon-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 622b5c04460f3d35f1e0d5bee14fce07 + size: 13295 + evaluate-alt-neurites@pc-L5-all-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-all-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-all-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-all-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: 008e44391b935a54c26d30dc45001ba9 + size: 746107 + outs: + - path: evaluation/pc-L5-all-diagram-tmd-rd-perslay-stratified-k-fold + md5: 830c6cfd3fca35571c8a4c9dc5f60738.dir + size: 8936285 + nfiles: 33 + - path: evaluation/pc-L5-all-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: 89ba2294560eaa69c130a2a985aab031 + size: 10938 + evaluate@pc-L2-apical-graph-proj-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L2-apical-graph-proj-gnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-apical-graph-proj-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L2-apical-graph-proj-gnn-stratified-k-fold/checkpoint.chk + md5: 72e1d942e09f7dba4ac4c284545bf8d4 + size: 15661804 + outs: + - path: evaluation/pc-L2-apical-graph-proj-gnn-stratified-k-fold + md5: 832f006b1562b5ee52b74915d5443c61.dir + size: 8923719 + nfiles: 33 + - path: evaluation/pc-L2-apical-graph-proj-gnn-stratified-k-fold.html + md5: d4889179d5950829cdbfd09264abd1d8 + size: 10337 + evaluate-alt-neurites@pc-L4-all-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-all-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-all-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L4-all-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: 011e174879257fee320fcff59162264d + size: 7735277 + outs: + - path: evaluation/pc-L4-all-image-tmd-rd-cnn-stratified-k-fold + md5: 53681b46e3b48eb873f19ce363752a85.dir + size: 8924351 + nfiles: 33 + - path: evaluation/pc-L4-all-image-tmd-rd-cnn-stratified-k-fold.html + md5: 31f1986569854b0fd07e8f52acd6536d + size: 10243 + evaluate-alt-neurites@pc-L4-all-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-all-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-all-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L4-all-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: 332996df7fc9578742cfadaaf3745dcb + size: 499058 + outs: + - path: evaluation/pc-L4-all-diagram-deepwalk-perslay-stratified-k-fold + md5: b24ae46ef5f0979b4e5d676fc2a9231a.dir + size: 8925479 + nfiles: 33 + - path: evaluation/pc-L4-all-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 7644398ad17f9fc1f4d8606501ebb918 + size: 10370 + evaluate-alt-neurites@pc-L5-axon-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-axon-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-axon-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-axon-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: cea837fbdb5bcfcdfbd2f892cf326933 + size: 167487151 + outs: + - path: evaluation/pc-L5-axon-image-tmd-rd-decision-tree-stratified-k-fold + md5: 80bcc69722ffb0dfe1aada0b21b91563.dir + size: 8955229 + nfiles: 33 + - path: evaluation/pc-L5-axon-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: 5277ba95c56c995909c726c22579620b + size: 10893 + evaluate-alt-neurites@pc-L6-all-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-all-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-all-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-all-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: 961a9640ba44c7749f10780e6132a8ae + size: 11315055 + outs: + - path: evaluation/pc-L6-all-image-deepwalk-cnn-stratified-k-fold + md5: e9f87d00ee925ba959e7c89b98b3df26.dir + size: 8996281 + nfiles: 33 + - path: evaluation/pc-L6-all-image-deepwalk-cnn-stratified-k-fold.html + md5: 8031fa5abd77b6fa7f94f82dd7c9d9b1 + size: 12050 + evaluate@pc-L6-apical-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L6-apical-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-apical-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L6-apical-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: ac94ca4287e4d1e862c9a732511647ad + size: 136339247 + outs: + - path: evaluation/pc-L6-apical-image-deepwalk-xgb-stratified-k-fold + md5: 5859f2b145d866ed32940f60aab0b72c.dir + size: 8991211 + nfiles: 33 + - path: evaluation/pc-L6-apical-image-deepwalk-xgb-stratified-k-fold.html + md5: 0859619b62090249dc39c0d9ba417713 + size: 12069 + evaluate-alt-neurites@pc-L4-all-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-all-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-all-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L4-all-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: 4daf631896029ec9f8595543bc759077 + size: 16725539 + outs: + - path: evaluation/pc-L4-all-graph-rd-gnn-stratified-k-fold + md5: 0bdbb49e329a744280b3fbfd0ae37f37.dir + size: 8926896 + nfiles: 33 + - path: evaluation/pc-L4-all-graph-rd-gnn-stratified-k-fold.html + md5: f4e6ab11a0466db50d9c792f6197262c + size: 10285 + evaluate@in-L1-axon-image-tmd-proj-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L1-axon-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L1-axon-image-tmd-proj-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L1-axon-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + md5: 8938e6bde0d7b805b18b51b5e123bf23 + size: 105187567 + outs: + - path: evaluation/in-L1-axon-image-tmd-proj-xgb-stratified-k-fold + md5: d042445a9c76e793435e89424c346bf7.dir + size: 8993748 + nfiles: 33 + - path: evaluation/in-L1-axon-image-tmd-proj-xgb-stratified-k-fold.html + md5: 9e3bc28db17e623ed0be55d0311f18c6 + size: 12043 + evaluate-alt-neurites@in-L5-basal-image-tmd-proj-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-basal-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L5-basal-image-tmd-proj-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-basal-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + md5: bbd5219099b67b18af0abea3f1aa7b0f + size: 9987694 + outs: + - path: evaluation/in-L5-basal-image-tmd-proj-cnn-stratified-k-fold + md5: f3dfd329edb5e3fc48242a2654e8f5c3.dir + size: 9015894 + nfiles: 33 + - path: evaluation/in-L5-basal-image-tmd-proj-cnn-stratified-k-fold.html + md5: 23b117da07b24849ca779abc67b9bc7e + size: 13265 + evaluate-alt-neurites@in-L23-basal-image-tmd-proj-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-basal-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L23-basal-image-tmd-proj-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-basal-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + md5: 74e7e4a330d7ae250cce241847fbf6f4 + size: 159284463 + outs: + - path: evaluation/in-L23-basal-image-tmd-proj-xgb-stratified-k-fold + md5: e91b90107dcd140b09448a9d67f6bde9.dir + size: 9076256 + nfiles: 33 + - path: evaluation/in-L23-basal-image-tmd-proj-xgb-stratified-k-fold.html + md5: 116c1adb6d816bfaa1d7d6defaf77d54 + size: 13270 + evaluate-lida-in-merged-bc-merged-all@xgb-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-xgb-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-xgb-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-xgb-tmd-stratified-k-fold/checkpoint.chk + md5: 216cf7c5edb9e050281b05581a8355ce + size: 419389295 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-xgb-tmd-stratified-k-fold + md5: 1383b2cb8091cd64514ff219ca4fb4b3.dir + size: 9019500 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-xgb-tmd-stratified-k-fold.html + md5: b06fe6490d4d62919c2ce5f6911d8679 + size: 11507 + evaluate@in-L4-axon-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L4-axon-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L4-axon-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L4-axon-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: 782c35329c9a77330f62451ec2236a5d + size: 600371 + outs: + - path: evaluation/in-L4-axon-diagram-tmd-rd-perslay-stratified-k-fold + md5: 3a1ccbaf26d2997df5071f73ea1e7670.dir + size: 9012869 + nfiles: 33 + - path: evaluation/in-L4-axon-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: 4b99541331283de517edce2b91da8b70 + size: 13313 + evaluate-lida-in-merged-proj@gnn-morphology-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-gnn-morphology-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-gnn-morphology-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-gnn-morphology-proj-stratified-k-fold/checkpoint.chk + md5: f75b37906cd5b330df15b04e7f22a363 + size: 24566915 + outs: + - path: evaluation/checkpoints-lida/in-merged-gnn-morphology-proj-stratified-k-fold + md5: 8cef190cafd3d929293ead9e7789ff68.dir + size: 9017460 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-gnn-morphology-proj-stratified-k-fold.html + md5: 7f4f24bd9363b4847463e9003d3103b1 + size: 12749 + evaluate-alt-neurites@pc-L4-basal-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-basal-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-basal-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L4-basal-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: b4387804fbf54ddf72ecf1fad2acb115 + size: 93238255 + outs: + - path: evaluation/pc-L4-basal-image-tmd-rd-decision-tree-stratified-k-fold + md5: 6b1636597fba033c8c80fd0f8c696863.dir + size: 8924055 + nfiles: 33 + - path: evaluation/pc-L4-basal-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: 44bc94abef38cf6e2260afb3bd3dce6b + size: 10312 + evaluate-alt-neurites@in-L6-all-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-all-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L6-all-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-all-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: bb7a45c9640b618c10edb3502da5e423 + size: 5660142 + outs: + - path: evaluation/in-L6-all-image-tmd-rd-cnn-stratified-k-fold + md5: 16770f90ad9e8d7b5e6e515a0426fe21.dir + size: 8967990 + nfiles: 33 + - path: evaluation/in-L6-all-image-tmd-rd-cnn-stratified-k-fold.html + md5: 586737d36834d194e4af055335c18a91 + size: 11431 + evaluate-alt-neurites@in-L6-basal-graph-proj-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-basal-graph-proj-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L6-basal-graph-proj-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-basal-graph-proj-gnn-stratified-k-fold/checkpoint.chk + md5: e2196d45b2a46ac80cbf76f70fac7e37 + size: 16149713 + outs: + - path: evaluation/in-L6-basal-graph-proj-gnn-stratified-k-fold + md5: b12b555ab4de29755c0ef97eab31acc0.dir + size: 8967618 + nfiles: 33 + - path: evaluation/in-L6-basal-graph-proj-gnn-stratified-k-fold.html + md5: a73304ffb66b7aa1b56d7717e284a2c7 + size: 11525 + evaluate-alt-neurites@pc-L2-all-graph-proj-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-all-graph-proj-gnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-all-graph-proj-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-all-graph-proj-gnn-stratified-k-fold/checkpoint.chk + md5: d1de1cbaf1dc9be23072e79f62880d1d + size: 15662090 + outs: + - path: evaluation/pc-L2-all-graph-proj-gnn-stratified-k-fold + md5: 70b2ad19dc1995ed273ef98f02084023.dir + size: 8922212 + nfiles: 33 + - path: evaluation/pc-L2-all-graph-proj-gnn-stratified-k-fold.html + md5: 58308738d51a60a09e83140ef9de977b + size: 10311 + evaluate-alt-neurites@pc-L2-axon-diagram-tmd-proj-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-axon-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-axon-diagram-tmd-proj-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-axon-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + md5: af5f4c5baff346b1e5899d906c2ce32e + size: 335292 + outs: + - path: evaluation/pc-L2-axon-diagram-tmd-proj-perslay-stratified-k-fold + md5: 4baa2042a21a0f7f79f36a166b41c5ff.dir + size: 8914193 + nfiles: 33 + - path: evaluation/pc-L2-axon-diagram-tmd-proj-perslay-stratified-k-fold.html + md5: 61307c3ba3ccc8f8a6964db9c0abd63e + size: 10383 + evaluate@in-L5-axon-image-tmd-proj-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L5-axon-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L5-axon-image-tmd-proj-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L5-axon-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + md5: 7228d3a86b197bac50078aa5d1363a75 + size: 9986924 + outs: + - path: evaluation/in-L5-axon-image-tmd-proj-cnn-stratified-k-fold + md5: 10a1f3e2ed90b1fe4d06703d41e2f632.dir + size: 9023309 + nfiles: 33 + - path: evaluation/in-L5-axon-image-tmd-proj-cnn-stratified-k-fold.html + md5: 91ed6dbfccc3f3dbfe3b1202044e0009 + size: 13239 + evaluate-alt-neurites@in-L4-all-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-all-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L4-all-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-all-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: f161f63930134853810470c804faf6ed + size: 10154348 + outs: + - path: evaluation/in-L4-all-image-tmd-rd-cnn-stratified-k-fold + md5: 5b07213169294f4da799e37429d41b6d.dir + size: 9021096 + nfiles: 33 + - path: evaluation/in-L4-all-image-tmd-rd-cnn-stratified-k-fold.html + md5: 966c737a3403cf41e0e3605db80e462c + size: 13213 + evaluate-alt-neurites@in-L6-all-graph-proj-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-all-graph-proj-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L6-all-graph-proj-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-all-graph-proj-gnn-stratified-k-fold/checkpoint.chk + md5: 0e17abe63236f93830bcc20256dd93d1 + size: 16149642 + outs: + - path: evaluation/in-L6-all-graph-proj-gnn-stratified-k-fold + md5: e83c89231a3579985bb0b659cd031ed5.dir + size: 8967893 + nfiles: 33 + - path: evaluation/in-L6-all-graph-proj-gnn-stratified-k-fold.html + md5: 4a9f913692e7e95cbc69693ff539c364 + size: 11499 + evaluate@pc-L6-apical-diagram-tmd-proj-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L6-apical-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-apical-diagram-tmd-proj-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L6-apical-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + md5: ad207f9ccf90aac49c74cdd2e6cfc264 + size: 647213 + outs: + - path: evaluation/pc-L6-apical-diagram-tmd-proj-perslay-stratified-k-fold + md5: 8218dc9fc67129ceb1e359456440278d.dir + size: 8987791 + nfiles: 33 + - path: evaluation/pc-L6-apical-diagram-tmd-proj-perslay-stratified-k-fold.html + md5: ef13ce73855ccefba402c1d869b11fd2 + size: 12178 + evaluate-janelia-L5-basal@gnn-morphology: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-basal-gnn-morphology-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-gnn-morphology-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-basal-gnn-morphology-stratified-k-fold/checkpoint.chk + md5: dd430144f4659cf860485a612d7511e0 + size: 16033170 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-gnn-morphology-stratified-k-fold + md5: e17ae9a0de1236747f17ff22bf0dd99e.dir + size: 8952455 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-gnn-morphology-stratified-k-fold.html + md5: c5aa1a57198839355a4ecbfedd18eeb3 + size: 11004 + evaluate-janelia-L5-basal@xgb-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-basal-xgb-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-xgb-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-basal-xgb-deepwalk-stratified-k-fold/checkpoint.chk + md5: 4bf3011e40d44dfaba2de5c15653affe + size: 66594799 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-xgb-deepwalk-stratified-k-fold + md5: 2947d3bcc7ef18c7ee40b2fcaaa6f431.dir + size: 8948792 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-xgb-deepwalk-stratified-k-fold.html + md5: 0025dfaee39e7ee4855779728584d69d + size: 10884 + evaluate@pc-L5-apical-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L5-apical-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-apical-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L5-apical-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: b12adc5f73903c010e4e48893685b9d4 + size: 13720360 + outs: + - path: evaluation/pc-L5-apical-image-tmd-rd-cnn-stratified-k-fold + md5: 48c6c5850c9a8efb88c0c35de576a81f.dir + size: 8951814 + nfiles: 33 + - path: evaluation/pc-L5-apical-image-tmd-rd-cnn-stratified-k-fold.html + md5: 87380a8b64d043075c0c9f2a14e968b5 + size: 10863 + evaluate-alt-neurites@in-L1-basal-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-basal-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L1-basal-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-basal-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: 4744c0fb83dd9a5fbe5142af4a612f2b + size: 109763247 + outs: + - path: evaluation/in-L1-basal-image-tmd-rd-decision-tree-stratified-k-fold + md5: 62f8922824ca508ccaf70b3f13dad0d2.dir + size: 8985626 + nfiles: 33 + - path: evaluation/in-L1-basal-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: b0dd687d4ebec8d33022f5fa8870b7fe + size: 12094 + evaluate-alt-neurites@pc-L2-basal-image-tmd-proj-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-basal-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-basal-image-tmd-proj-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-basal-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + md5: 720c040ba2411ed789d2816b0ca307f3 + size: 44543791 + outs: + - path: evaluation/pc-L2-basal-image-tmd-proj-decision-tree-stratified-k-fold + md5: a9d6841b869d14d12cce249e6fa8715f.dir + size: 8924867 + nfiles: 33 + - path: evaluation/pc-L2-basal-image-tmd-proj-decision-tree-stratified-k-fold.html + md5: c2abf4db411b1967270d5a906a38cf0b + size: 10338 + evaluate-alt-neurites@pc-L5-all-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-all-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-all-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-all-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: ee33e7b13585da489b526ca4f001160b + size: 170880111 + outs: + - path: evaluation/pc-L5-all-image-tmd-rd-decision-tree-stratified-k-fold + md5: 05ec7273906a2199762b265463b3f50e.dir + size: 8941858 + nfiles: 33 + - path: evaluation/pc-L5-all-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: 1ff09800a0e3121fd4ef08bc1f26b838 + size: 10880 + evaluate-alt-neurites@in-L23-all-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-all-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L23-all-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-all-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: fd77c343260960da21e25c07e62db749 + size: 751152 + outs: + - path: evaluation/in-L23-all-diagram-tmd-rd-perslay-stratified-k-fold + md5: 9c8448d87be409f7d26a758079fa2d07.dir + size: 9078522 + nfiles: 33 + - path: evaluation/in-L23-all-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: a1c59b57a2011e319c3a0ee2a8106874 + size: 13326 + evaluate-alt-neurites@pc-L2-axon-image-tmd-proj-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-axon-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-axon-image-tmd-proj-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-axon-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + md5: 5988581b68370228ff9d7cc253e88d8f + size: 3663725 + outs: + - path: evaluation/pc-L2-axon-image-tmd-proj-cnn-stratified-k-fold + md5: 2ff3469eef0f41015eac3330730c5165.dir + size: 8921807 + nfiles: 33 + - path: evaluation/pc-L2-axon-image-tmd-proj-cnn-stratified-k-fold.html + md5: 09d231be033aebb3dda09cdd2892269c + size: 10282 + evaluate@pc-L6-apical-image-tmd-proj-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L6-apical-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-apical-image-tmd-proj-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L6-apical-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + md5: 23c3d8eade0ee5a76e360601224d8f1a + size: 141463599 + outs: + - path: evaluation/pc-L6-apical-image-tmd-proj-xgb-stratified-k-fold + md5: 180136b6a0d8c00f6459f82364f08182.dir + size: 8997048 + nfiles: 33 + - path: evaluation/pc-L6-apical-image-tmd-proj-xgb-stratified-k-fold.html + md5: 3b251df5eef017c9e5472dab0e804e05 + size: 12069 + evaluate@in-L4-axon-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L4-axon-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L4-axon-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L4-axon-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: eadcc5d5380656553c13e3e9653d9800 + size: 10154619 + outs: + - path: evaluation/in-L4-axon-image-deepwalk-cnn-stratified-k-fold + md5: d56b4825c6363450de36bf776b20985b.dir + size: 9027215 + nfiles: 33 + - path: evaluation/in-L4-axon-image-deepwalk-cnn-stratified-k-fold.html + md5: 877cd03615f80d68289b46f7e0e91bb9 + size: 13239 + evaluate-alt-neurites@in-L6-basal-image-tmd-proj-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-basal-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L6-basal-image-tmd-proj-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-basal-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + md5: 03d17007c23100d75d1e3a362decf3f4 + size: 5660333 + outs: + - path: evaluation/in-L6-basal-image-tmd-proj-cnn-stratified-k-fold + md5: 83bb7be5834ea725b237c90c5138610f.dir + size: 8965182 + nfiles: 33 + - path: evaluation/in-L6-basal-image-tmd-proj-cnn-stratified-k-fold.html + md5: b4afaabd66a828ecf690c2def13e8996 + size: 11483 + evaluate-alt-neurites@pc-L4-basal-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-basal-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-basal-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L4-basal-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: d1a64a5e0ffd205388ead9570d918d51 + size: 7735150 + outs: + - path: evaluation/pc-L4-basal-image-tmd-rd-cnn-stratified-k-fold + md5: 1eb4dc85e451462cb5a2bc95e02407b4.dir + size: 8924669 + nfiles: 33 + - path: evaluation/pc-L4-basal-image-tmd-rd-cnn-stratified-k-fold.html + md5: c3fef61cc47cf234622a6c5b38e869f5 + size: 10269 + evaluate-alt-neurites@in-L4-all-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-all-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L4-all-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-all-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: 9c7a7ab76385470b5cb84e17d1b64810 + size: 129577583 + outs: + - path: evaluation/in-L4-all-image-deepwalk-xgb-stratified-k-fold + md5: df89cae08870f78abd4002a8d8a81003.dir + size: 9017121 + nfiles: 33 + - path: evaluation/in-L4-all-image-deepwalk-xgb-stratified-k-fold.html + md5: 7ad4c491c2015447cffcc37c9892c67a + size: 13231 + evaluate-alt-neurites@pc-L3-basal-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-basal-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-basal-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-basal-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: 79bc35a19f4b668723f32a6c9ee3d009 + size: 342843 + outs: + - path: evaluation/pc-L3-basal-diagram-deepwalk-perslay-stratified-k-fold + md5: 7742f0893cac0830a8ca9991f17429ed.dir + size: 8904193 + nfiles: 33 + - path: evaluation/pc-L3-basal-diagram-deepwalk-perslay-stratified-k-fold.html + md5: a78f2f9c612113b4eb0b92773dfc0bac + size: 9802 + evaluate-alt-neurites@pc-L3-basal-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-basal-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-basal-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-basal-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: 78db575871655254c2133c1da6e80ac9 + size: 50288623 + outs: + - path: evaluation/pc-L3-basal-image-tmd-rd-xgb-stratified-k-fold + md5: 86ad11ad851b140cbe71b811f0be34b9.dir + size: 8906523 + nfiles: 33 + - path: evaluation/pc-L3-basal-image-tmd-rd-xgb-stratified-k-fold.html + md5: 1d3fc8d1e0f6affde4817608ca5398d8 + size: 9667 + evaluate-alt-neurites@pc-L2-all-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-all-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-all-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-all-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 755412ad81f4efd523ea9001dfc2ec95 + size: 47738223 + outs: + - path: evaluation/pc-L2-all-image-deepwalk-decision-tree-stratified-k-fold + md5: cbc17e196ca3b8f6821b69b6e10cfbc7.dir + size: 8917133 + nfiles: 33 + - path: evaluation/pc-L2-all-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 8003fc4bfa8af2ec004f1ddb27533949 + size: 10312 + evaluate-alt-neurites@pc-L6-basal-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-basal-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-basal-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-basal-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: d5a43080fd25ebcab76d6ba0528cae0a + size: 139631855 + outs: + - path: evaluation/pc-L6-basal-image-deepwalk-xgb-stratified-k-fold + md5: a623992e065b0dd99382b45b003dfa9d.dir + size: 8996392 + nfiles: 33 + - path: evaluation/pc-L6-basal-image-deepwalk-xgb-stratified-k-fold.html + md5: 8451ea54c16196601371e0360f645f7d + size: 12069 + evaluate-alt-neurites@pc-L6-all-image-tmd-proj-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-all-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-all-image-tmd-proj-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-all-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + md5: eb54eb9d3c881211409fba9e43f52a0b + size: 137325807 + outs: + - path: evaluation/pc-L6-all-image-tmd-proj-xgb-stratified-k-fold + md5: 8d9103d45c434625e2d259bf37d80bb6.dir + size: 8990200 + nfiles: 33 + - path: evaluation/pc-L6-all-image-tmd-proj-xgb-stratified-k-fold.html + md5: 2eeb3f2008f034895d10d75c050f0879 + size: 12043 + evaluate@pc-L3-apical-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L3-apical-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-apical-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L3-apical-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: c6fcf4cab04a44719216eb5dcedc554b + size: 15661408 + outs: + - path: evaluation/pc-L3-apical-graph-rd-gnn-stratified-k-fold + md5: ae2d518c4e3046cc342f830e48886eb0.dir + size: 8897039 + nfiles: 33 + - path: evaluation/pc-L3-apical-graph-rd-gnn-stratified-k-fold.html + md5: bbfd39e8982c4ca8bf64724bd17b6d7f + size: 9717 + evaluate-lida-in-merged-all-proj@cnn-tmd-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-all-cnn-tmd-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-all-cnn-tmd-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-all-cnn-tmd-proj-stratified-k-fold/checkpoint.chk + md5: 3044dacbe1224a76e5891b553c418cf2 + size: 35847665 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-cnn-tmd-proj-stratified-k-fold + md5: 89acc81e2090d8403e8c89267047fa54.dir + size: 9010683 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-cnn-tmd-proj-stratified-k-fold.html + md5: 0d82630434b58bc27b351148fde3e8dc + size: 12635 + evaluate@pc-L2-apical-image-tmd-proj-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L2-apical-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-apical-image-tmd-proj-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L2-apical-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + md5: 02e27d266b9e8e18aa050040f7740b1f + size: 47262447 + outs: + - path: evaluation/pc-L2-apical-image-tmd-proj-decision-tree-stratified-k-fold + md5: 90b68444498ee17b55a149ba3bc1731a.dir + size: 8925221 + nfiles: 33 + - 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path: training/checkpoints-lida-alt-neurites/janelia-L5-axon-perslay-tmd-stratified-k-fold/checkpoint.chk + md5: d1cefcf552302e4cb5738f2887a2b8e7 + size: 396156 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-perslay-tmd-stratified-k-fold + md5: 88f23976a99a0d4a246e72332677df30.dir + size: 8943327 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-perslay-tmd-stratified-k-fold.html + md5: 670cb631e4ca0c127eb117b1bc7f94c8 + size: 10894 + evaluate-lida-in-merged-bc-merged@decision-tree-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-bc-merged-decision-tree-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-bc-merged-decision-tree-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-bc-merged-decision-tree-tmd-stratified-k-fold/checkpoint.chk + md5: 3ebe6326adc73cc66e29e9fb46690ca1 + size: 415851119 + outs: + - path: evaluation/checkpoints-lida/in-merged-bc-merged-decision-tree-tmd-stratified-k-fold + md5: 5b0d33189691fccf76fe1d4612a59edf.dir + size: 9010386 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-bc-merged-decision-tree-tmd-stratified-k-fold.html + md5: 0d580efbdb41cae50d898fc612a81665 + size: 11498 + evaluate@in-L6-axon-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L6-axon-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L6-axon-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L6-axon-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 209130e296d96ed101258c404df6dc3f + size: 65391087 + outs: + - path: evaluation/in-L6-axon-image-deepwalk-decision-tree-stratified-k-fold + md5: 139b3617f93a56dc5de5d637aab535d9.dir + size: 8964928 + nfiles: 33 + - path: evaluation/in-L6-axon-image-deepwalk-decision-tree-stratified-k-fold.html + md5: df469c2ced9622ff49feec7e30aa279b + size: 11500 + evaluate@in-L6-axon-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L6-axon-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L6-axon-graph-rd-gnn-stratified-k-fold.html + deps: + - 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path: evaluation/in-L1-basal-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: e997d16b8a96127085079546d52cc1b8 + size: 12151 + evaluate-lida-in-merged-basal-proj@gnn-morphology-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-basal-gnn-morphology-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-basal-gnn-morphology-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-basal-gnn-morphology-proj-stratified-k-fold/checkpoint.chk + md5: 792cceae483af10f3cd9abdcea97cda1 + size: 24569911 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-gnn-morphology-proj-stratified-k-fold + md5: 329d7b89bd481abb8e547f1a51b0b980.dir + size: 8990920 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-gnn-morphology-proj-stratified-k-fold.html + md5: 25905507e9ec7b9a44dc524fb52cc70f + size: 12835 + evaluate-alt-neurites@pc-L4-all-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-all-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-all-image-deepwalk-xgb-stratified-k-fold.html + deps: + - 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path: evaluation/pc-L3-axon-image-deepwalk-cnn-stratified-k-fold.html + md5: 1258dc8e6da913111ab2559046e13d7e + size: 9688 + evaluate-alt-neurites@pc-L5-all-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-all-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-all-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-all-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: a03a4d7d8403e30ccec1e4930174e474 + size: 179882927 + outs: + - path: evaluation/pc-L5-all-image-deepwalk-xgb-stratified-k-fold + md5: a9d832bfea76f8f69ad9d3edcc61e395.dir + size: 8952676 + nfiles: 33 + - path: evaluation/pc-L5-all-image-deepwalk-xgb-stratified-k-fold.html + md5: 33e0bffc0772392ea37af5646056df5b + size: 10855 + evaluate-lida-in-merged-bc-merged-basal@perslay-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-perslay-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-perslay-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-perslay-deepwalk-stratified-k-fold/checkpoint.chk + md5: 7105a0fcb21232cca4e5fa7eec455b05 + size: 1656570 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-perslay-deepwalk-stratified-k-fold + md5: 605b10a3dfe81b33edbe1d5d7810c4ce.dir + size: 8996596 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-perslay-deepwalk-stratified-k-fold.html + md5: ef46810a3642888fb6bd23e2971fc5ec + size: 11680 + evaluate-alt-neurites@in-L5-basal-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-basal-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L5-basal-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-basal-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: 5501f5ba412b3ada104e5d2de84594fe + size: 9987503 + outs: + - path: evaluation/in-L5-basal-image-tmd-rd-cnn-stratified-k-fold + md5: b6f65486423e0387875f0c6bc28303bc.dir + size: 9018346 + nfiles: 33 + - path: evaluation/in-L5-basal-image-tmd-rd-cnn-stratified-k-fold.html + md5: 26ad70d0a64bacf48157461c1de9a748 + size: 13239 + evaluate@pc-L5-apical-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L5-apical-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-apical-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L5-apical-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: b1260669be1fe196b463818189fa4c68 + size: 745466 + outs: + - path: evaluation/pc-L5-apical-diagram-tmd-rd-perslay-stratified-k-fold + md5: 217d1814e2c20b8bd05daf0088a53f66.dir + size: 8944526 + nfiles: 33 + - path: evaluation/pc-L5-apical-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: 3bc71986563c44b95845a0fe878866e1 + size: 10964 + evaluate@pc-L4-apical-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L4-apical-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-apical-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L4-apical-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: cd2c7be0ad7ba0eef2a5d0b201f0459f + size: 498860 + outs: + - path: evaluation/pc-L4-apical-diagram-deepwalk-perslay-stratified-k-fold + md5: 42db17eae8994cef1a2f99eef63c9753.dir + size: 8915216 + nfiles: 33 + - path: evaluation/pc-L4-apical-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 0d038a2d95c4d223cff7b2f9e34a9550 + size: 10396 + evaluate-alt-neurites@pc-L2-basal-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-basal-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-basal-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-basal-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: f91e807aff458f7799a293d218f8f275 + size: 49146223 + outs: + - path: evaluation/pc-L2-basal-image-deepwalk-xgb-stratified-k-fold + md5: 051a12649cc9eabe088026545ef25762.dir + size: 8910866 + nfiles: 33 + - path: evaluation/pc-L2-basal-image-deepwalk-xgb-stratified-k-fold.html + md5: 60fc2b06e846091474a1a41e174ca07e + size: 10287 + evaluate-lida-in-merged-basal@xgb-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-basal-xgb-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-basal-xgb-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-basal-xgb-deepwalk-stratified-k-fold/checkpoint.chk + md5: 5908f5b964de5b24344fb6d041f81447 + size: 459687599 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-xgb-deepwalk-stratified-k-fold + md5: f352ec897ee10ee6543348a3d4896edb.dir + size: 9013548 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-xgb-deepwalk-stratified-k-fold.html + md5: 45db06367ba9b44639ddd5a07ce18478 + size: 12653 + evaluate-lida-in-merged-bc-merged@decision-tree-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-bc-merged-decision-tree-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-bc-merged-decision-tree-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-bc-merged-decision-tree-deepwalk-stratified-k-fold/checkpoint.chk + md5: 67621bb793af56790b9583819a485655 + size: 444663471 + outs: + - path: evaluation/checkpoints-lida/in-merged-bc-merged-decision-tree-deepwalk-stratified-k-fold + md5: 07364808bf3a955c514d6dee0211f544.dir + size: 9001146 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-bc-merged-decision-tree-deepwalk-stratified-k-fold.html + md5: c10699e10f4fb54324c2494721e4b133 + size: 11560 + evaluate-alt-neurites@pc-L3-axon-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-axon-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-axon-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-axon-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 998b1d74da20b8dcb9251d0a443cbaec + size: 44958191 + outs: + - path: evaluation/pc-L3-axon-image-deepwalk-decision-tree-stratified-k-fold + md5: 412b08df28fca31597820260c91a0cc4.dir + size: 8909721 + nfiles: 33 + - path: evaluation/pc-L3-axon-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 45835328eac78280e7eb6691c70462ca + size: 9731 + evaluate@in-L1-axon-image-tmd-proj-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L1-axon-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L1-axon-image-tmd-proj-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L1-axon-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + md5: 6caae89303ec85e66f2dc65e4cd29f96 + size: 9319409 + outs: + - path: evaluation/in-L1-axon-image-tmd-proj-cnn-stratified-k-fold + md5: 9c2a9a87fdf830ddb92a7a4b0bd342b2.dir + size: 8999570 + nfiles: 33 + - path: evaluation/in-L1-axon-image-tmd-proj-cnn-stratified-k-fold.html + md5: c16c386d9db53510005c35789765d6e1 + size: 12051 + evaluate-alt-neurites@pc-L3-basal-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-basal-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-basal-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-basal-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 4cc71ea6ed8f89dc27e5a3dabec2203c + size: 48557679 + outs: + - path: evaluation/pc-L3-basal-image-deepwalk-decision-tree-stratified-k-fold + md5: beaa81ef043b04de9c24185da14b4793.dir + size: 8912889 + nfiles: 33 + - path: evaluation/pc-L3-basal-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 8074dfefd2260fe695308d9e855a34af + size: 9744 + evaluate@pc-L4-apical-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L4-apical-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-apical-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L4-apical-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: 4d32362698c8e4f915c70f4827fb58d7 + size: 97591087 + outs: + - path: evaluation/pc-L4-apical-image-tmd-rd-xgb-stratified-k-fold + md5: c833ea6d47f4cd399c3ca9d8f712137e.dir + size: 8933329 + nfiles: 33 + - path: evaluation/pc-L4-apical-image-tmd-rd-xgb-stratified-k-fold.html + md5: 5a3f645a7cb8efc888301a444f0d5ab3 + size: 10261 + evaluate-alt-neurites@pc-L2-all-image-tmd-proj-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-all-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-all-image-tmd-proj-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-all-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + md5: c29bf743d18bdd5c889df5388e0915bf + size: 3913266 + outs: + - path: evaluation/pc-L2-all-image-tmd-proj-cnn-stratified-k-fold + md5: 6a6b3c8e2e78070398474b4710d960f0.dir + size: 8914105 + nfiles: 33 + - path: evaluation/pc-L2-all-image-tmd-proj-cnn-stratified-k-fold.html + md5: 02eb32a4ec8fa7a7afe35dbda25dc372 + size: 10269 + evaluate-janelia-L5@gnn-morphology: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/janelia-L5-gnn-morphology-stratified-k-fold/checkpoint.chk + evaluation/janelia-L5/gnn-morphology-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/janelia-L5-gnn-morphology-stratified-k-fold + md5: fa46e7616c1697fba39f8340df0627a6.dir + size: 24975377 + nfiles: 34 + outs: + - path: evaluation/janelia-L5/gnn-morphology-stratified-k-fold + md5: 6309ea0bd4d96944581866291632b754.dir + size: 8942438 + nfiles: 33 + - path: evaluation/janelia-L5/gnn-morphology-stratified-k-fold.html + md5: 0cd67c10037f0d68237226a5ef2d84ea + size: 10799 + evaluate@pc-L6-apical-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L6-apical-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-apical-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L6-apical-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: 8cfe4707cc62b7dcea924d478a85b1c1 + size: 11315308 + outs: + - path: evaluation/pc-L6-apical-image-deepwalk-cnn-stratified-k-fold + md5: fa4c1df95f86831b100d3798756d31ad.dir + size: 8999278 + nfiles: 33 + - path: evaluation/pc-L6-apical-image-deepwalk-cnn-stratified-k-fold.html + md5: 0fd8aa0c966e2e85f89284fc57346982 + size: 12077 + evaluate-lida-in-merged-proj@perslay-tmd-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-perslay-tmd-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-perslay-tmd-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-perslay-tmd-proj-stratified-k-fold/checkpoint.chk + md5: 3f68d68c72b4a37cd9cf95bd5e0298f5 + size: 1677112 + outs: + - path: evaluation/checkpoints-lida/in-merged-perslay-tmd-proj-stratified-k-fold + md5: e796ede39049cf4acaba527148d6f7fe.dir + size: 9004262 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-perslay-tmd-proj-stratified-k-fold.html + md5: fc1bcf7cfd78f5048eddf3fb9a934f94 + size: 12651 + evaluate@in-L1-axon-graph-proj-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L1-axon-graph-proj-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L1-axon-graph-proj-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L1-axon-graph-proj-gnn-stratified-k-fold/checkpoint.chk + md5: ff3590a442e9fabda3e9c66fd9b35488 + size: 17170193 + outs: + - path: evaluation/in-L1-axon-graph-proj-gnn-stratified-k-fold + md5: e3d0858dc5897e2d50f59b9c6b880658.dir + size: 8994070 + nfiles: 33 + - path: evaluation/in-L1-axon-graph-proj-gnn-stratified-k-fold.html + md5: b2afe7d9e8aa35beaa53c2f21c52df5f + size: 12093 + evaluate-janelia-L5-all@gnn-morphology: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-all-gnn-morphology-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-gnn-morphology-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-all-gnn-morphology-stratified-k-fold/checkpoint.chk + md5: f04d3b6ce4318067a46b31d32fbaa93b + size: 16032929 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-gnn-morphology-stratified-k-fold + md5: fe181a8b5cf5e1459aad72362570544c.dir + size: 8945776 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-gnn-morphology-stratified-k-fold.html + md5: dbbed46e6b92540fd2583c92d8cb433f + size: 10978 + evaluate-alt-neurites@pc-L4-basal-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-basal-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-basal-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L4-basal-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: 9eef49b8a93be2644f81e5738d046ac9 + size: 95454063 + outs: + - path: evaluation/pc-L4-basal-image-tmd-rd-xgb-stratified-k-fold + md5: de9ce9890dc7e3acf4b6294abf4db325.dir + size: 8916181 + nfiles: 33 + - path: evaluation/pc-L4-basal-image-tmd-rd-xgb-stratified-k-fold.html + md5: a46529f107e787d5f915fbd0ffa6f6f9 + size: 10261 From 506ee02e09b7d27b5a93a131548773c66037429e Mon Sep 17 00:00:00 2001 From: Emilie Delattre Date: Tue, 8 Nov 2022 11:00:00 +0100 Subject: [PATCH 03/12] Update 2 --- dvc/dvc.lock | 1489 +++++++++++++++++++++++++++++++++++++++----------- 1 file changed, 1181 insertions(+), 308 deletions(-) diff --git a/dvc/dvc.lock b/dvc/dvc.lock index cab5285..dab2842 100644 --- a/dvc/dvc.lock +++ b/dvc/dvc.lock @@ -7221,13 +7221,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-bc-merged-cnn-deepwalk-stratified-k-fold - md5: 496acc1c16060e1d35994d5fe88bb11e.dir - size: 16294497 - nfiles: 13 + md5: 11788ae72f2cbcdcdd68052699574e89.dir + size: 44686458 + nfiles: 34 train-lida-in-merged-bc-merged@gnn-morphology: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/axon/graph-rd --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -7241,13 +7241,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-bc-merged-gnn-morphology-stratified-k-fold - md5: 8585af0c7d4b321e1e29a37360580761.dir - size: 12230296 - nfiles: 13 + md5: 3da7578a3432b0053e58e64b0f6ebfc4.dir + size: 33523103 + nfiles: 34 train-lida-in-merged-bc-merged@cnn-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/axon/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -7327,13 +7327,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-bc-merged-perslay-deepwalk-stratified-k-fold - md5: 1ef84e832ade1adb71979c2f6571fd5a.dir - size: 3917235 - nfiles: 13 + md5: 2a03472cb3af4cbfd2526936712b3789.dir + size: 10652353 + nfiles: 34 train-lida-in-merged-bc-merged@xgb-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/axon/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -7427,13 +7427,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-xgb-tmd-stratified-k-fold - md5: 991dcd03b461cdedeb415cad8657803a.dir - size: 156842316 - nfiles: 13 + md5: 6b84b8e72e9904ce825451a73a1bcf4b.dir + size: 431682318 + nfiles: 34 train-lida-in-merged@decisiontree-deepwalk: cmd: morphoclass -v train --dataset-config training/extra-configs/lida-in-merged.yaml --model-config training/configs/model-decisiontree-deepwalk.yaml --splitter-config @@ -7976,13 +7976,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/janelia-L5-cnn-tmd-stratified-k-fold - md5: a3c98a33f9886eac201509ae816f15c1.dir - size: 5167565 - nfiles: 13 + md5: ad85c8b910447a1e16d082224e2e6e21.dir + size: 14190108 + nfiles: 34 train-janelia-L5@gnn-morphology: cmd: morphoclass -v train --features-dir extract-features/lida-janelia-L5/apical/graph-rd --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11107,13 +11107,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L5-axon-image-tmd-rd-decision-tree-stratified-k-fold - md5: 2de68cedbfd39f2239cadc1b1602e12b.dir - size: 45322167 - nfiles: 13 + md5: 88796ba9d0406922583a43c398e29a58.dir + size: 124551410 + nfiles: 34 train@pc-L3-apical-diagram-tmd-rd-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L3/apical/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11147,13 +11147,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L23-axon-image-deepwalk-cnn-stratified-k-fold - md5: ad71b3c6145d335745af15f5f1ace471.dir - size: 8323950 - nfiles: 13 + md5: 1dc62d3f38a6c72eb91f81d0d7bd7586.dir + size: 22799388 + nfiles: 34 train@pc-L5-apical-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L5/apical/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11267,13 +11267,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L6-apical-image-tmd-proj-cnn-stratified-k-fold - md5: b3a51dc5e7c2a08ba805ff7706cab9e1.dir - size: 7423585 - nfiles: 13 + md5: a333107598dd5f28f3bfcf1990c80d7b.dir + size: 20299149 + nfiles: 34 train@in-L4-axon-image-deepwalk-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/axon/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11407,13 +11407,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L4-apical-image-deepwalk-cnn-stratified-k-fold - md5: b5579b46e1a29b9f1f11b755bf289d34.dir - size: 6082553 - nfiles: 13 + md5: 41533ae9a73380dec79698e0733f16a9.dir + size: 16658508 + nfiles: 34 train@pc-L2-apical-image-deepwalk-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/apical/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11707,13 +11707,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L4-apical-diagram-tmd-rd-perslay-stratified-k-fold - md5: 9081500a032d14b138288ab0e97fc044.dir - size: 3444463 - nfiles: 13 + md5: ff445bb3f927ccb4ebbbb5b3960a4972.dir + size: 9423433 + nfiles: 34 train@pc-L3-apical-image-deepwalk-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L3/apical/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11807,13 +11807,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L4-apical-image-deepwalk-xgb-stratified-k-fold - md5: b6bc8989bef9151cd13667de4d4f1a66.dir - size: 36177986 - nfiles: 13 + md5: 772a8f121aa191eb6fb955c674b63d33.dir + size: 99581571 + nfiles: 34 train@in-L23-axon-image-tmd-rd-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/axon/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12267,13 +12267,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L1-axon-image-deepwalk-cnn-stratified-k-fold - md5: 2ad7f492eeedcf13dcc30eb70e0c4a4a.dir - size: 6686161 - nfiles: 13 + md5: cddf31e57770eb657bf0bb7b7c92a153.dir + size: 18306691 + nfiles: 34 train@pc-L5-apical-image-deepwalk-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L5/apical/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12347,13 +12347,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L5-apical-image-tmd-rd-decision-tree-stratified-k-fold - md5: ebbf6a917dafa44e3c5128bb332a6b3f.dir - size: 67528959 - nfiles: 13 + md5: 1656e5e3b15d2b1a9d9423a422bc602b.dir + size: 185615794 + nfiles: 34 train@pc-L2-apical-image-tmd-proj-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/apical/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12367,13 +12367,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L2-apical-image-tmd-proj-xgb-stratified-k-fold - md5: c476286e591df7452877ee6f46ec34a6.dir - size: 21031438 - nfiles: 13 + md5: cc17b4c186c52b8dabbd7ab4c46cd300.dir + size: 57775606 + nfiles: 34 train@in-L1-axon-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/axon/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12487,13 +12487,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L6-axon-image-deepwalk-cnn-stratified-k-fold - md5: 01369cb11e8946aef77ec71f43519402.dir - size: 5335129 - nfiles: 13 + md5: ea649d0422d5cb3359a481987a1c238d.dir + size: 14621115 + nfiles: 34 train@in-L23-axon-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/axon/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12587,13 +12587,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L6-apical-diagram-deepwalk-perslay-stratified-k-fold - md5: 3aada5cc8d4030d800907fba35689b97.dir - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L3-all-image-deepwalk-cnn-stratified-k-fold - md5: 245df1853e958307774481377d5b6a3e.dir - size: 4691754 - nfiles: 13 + md5: 0557960414ce0a7d63f178efff2ab9ef.dir + size: 12814050 + nfiles: 34 train-alt-neurites@in-L1-all-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/all/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13687,13 +13687,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-basal-image-deepwalk-decision-tree-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L6-all-image-tmd-proj-decision-tree-stratified-k-fold - md5: 3b939452a551d87b15d027f108fba65d.dir - size: 51827904 - nfiles: 13 + md5: b010bcf4337002798abb28c2c61af9d1.dir + size: 142453797 + nfiles: 34 train-alt-neurites@pc-L4-basal-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/basal/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14227,13 +14227,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-all-image-deepwalk-xgb-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L5-basal-image-deepwalk-decision-tree-stratified-k-fold - md5: 015de5fe889a5acc844b267a970bbab5.dir - size: 66580582 - nfiles: 13 + md5: be48a7aaaeb539fc436411b73d45e8e4.dir + size: 183020055 + nfiles: 34 train-lida-in-merged@decision-tree-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/axon/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14487,13 +14487,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L23-all-image-deepwalk-cnn-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L5-basal-diagram-tmd-rd-perslay-stratified-k-fold - md5: d635bb15afc1a7b0f85213d722d307d0.dir - size: 3540375 - nfiles: 13 + md5: d7194c4d2be19f0d80431c19518b8ea2.dir + size: 9682154 + nfiles: 34 train-alt-neurites@pc-L2-axon-diagram-tmd-proj-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/axon/diagram-tmd-proj --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15127,13 +15127,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L4-axon-graph-rd-gnn-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L3-basal-diagram-tmd-rd-perslay-stratified-k-fold - md5: b4987ffc0e09f181237dedffb2e66a14.dir - size: 3382119 - nfiles: 13 + md5: 134dbbb5f566a852812df058a0d5e93f.dir + size: 9238758 + nfiles: 34 train-alt-neurites@in-L5-all-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/all/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15567,13 +15567,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L5-all-image-deepwalk-decision-tree-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L4-basal-graph-rd-gnn-stratified-k-fold - md5: 0f3a1de6c075387e7f27a7f2bcecec2e.dir - size: 9338507 - nfiles: 13 + md5: 55082abc9e23125063a2c705b6e3e3a4.dir + size: 25647872 + nfiles: 34 train-alt-neurites@pc-L3-axon-image-deepwalk-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L3/axon/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16127,13 +16127,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L3-all-image-tmd-rd-cnn-stratified-k-fold - md5: f0d094200fb41368b8945ca7a48998ee.dir - size: 4687702 - nfiles: 13 + md5: ae0a458a0a7cd244e9f42686011f1bcc.dir + size: 12820561 + nfiles: 34 train-alt-neurites@pc-L5-axon-image-tmd-rd-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L5/axon/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16227,13 +16227,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L5-basal-image-tmd-rd-decision-tree-stratified-k-fold - md5: aec35010c380d0196e5ccaca26ca92f4.dir - size: 62761941 - nfiles: 13 + md5: 39f34ab36ce4f1d43ce276370e799fdc.dir + size: 172486227 + nfiles: 34 train-alt-neurites@pc-L3-all-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L3/all/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16267,13 +16267,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L3-axon-diagram-deepwalk-perslay-stratified-k-fold - md5: 8d343eed325be5950cd8fef1fb447960.dir - size: 3399611 - nfiles: 13 + md5: 39b2759571b9d0ab2f5bea6a50014817.dir + size: 9248682 + nfiles: 34 train-alt-neurites@pc-L4-axon-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/axon/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16387,13 +16387,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-basal-image-deepwalk-cnn-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L2-basal-image-deepwalk-cnn-stratified-k-fold - md5: 2ca4f9acb51f0da62121585b98211765.dir - size: 4676534 - nfiles: 13 + md5: 3faa8fe65da46e4035ecd3b37dfde3a4.dir + size: 12833109 + nfiles: 34 train-alt-neurites@pc-L6-axon-image-tmd-proj-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/axon/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16587,13 +16587,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/janelia-L5-decision-tree-tmd-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-cnn-tmd-stratified-k-fold - md5: 74d2c67d48ea27bec42827004dc86d70.dir - size: 16303489 - nfiles: 13 + md5: fef58119f1bb785d1949e5c9f9c8a3c6.dir + size: 44692513 + nfiles: 34 train-lida-in-merged-bc-merged-basal@cnn-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/basal/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -17647,13 +17647,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-xgb-deepwalk-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/janelia-L5-axon-perslay-deepwalk-stratified-k-fold - md5: adb449bfedd244f07a5f16684265909a.dir - size: 3421067 - nfiles: 13 + md5: e4945a3cfa1412a7639a214d33f6747a.dir + size: 9339325 + nfiles: 34 train-janelia-L5-all@xgb-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-janelia-L5/all/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -17907,13 +17907,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/janelia-L5-all-xgb-tmd-stratified-k-fold - md5: 664325af797cbd3a42e7350d11aaf39d.dir - size: 26006532 - nfiles: 13 + md5: 386d1ad7e92c74d2835e4f814d800485.dir + size: 71552382 + nfiles: 34 train-janelia-L5-axon@xgb-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-janelia-L5/axon/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -18087,13 +18087,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/janelia-L5-axon-xgb-deepwalk-stratified-k-fold - md5: 264a3570f5b84dfe5c0f1ee65eab12e9.dir - size: 26315482 - nfiles: 13 + md5: 334da6eb0a6ac85d0dd5bb2f0d50f62b.dir + size: 72484047 + nfiles: 34 train-janelia-L5-basal@perslay-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-janelia-L5/basal/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -18247,13 +18247,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-all-cnn-tmd-stratified-k-fold - md5: c8955adb0c38e742e8181d507ec9f6fb.dir - size: 16397666 - nfiles: 13 + md5: 70aede80cca9c8319f2bea3f9b40f643.dir + size: 44855425 + nfiles: 34 train-lida-in-merged-all@perslay-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/all/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -18407,13 +18407,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-all-decision-tree-tmd-stratified-k-fold - md5: 432be1419d9bc3f8fdf2f3486c59abcd.dir - size: 154141351 - nfiles: 13 + md5: 59608b274eb9700737b28cfcf97c3a6c.dir + size: 423675330 + nfiles: 34 train-lida-in-merged-all@decision-tree-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/all/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -18447,13 +18447,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-all-xgb-deepwalk-stratified-k-fold - md5: 3cb2d66adbe4ac693036d9010ce8e9ae.dir - size: 175055603 - nfiles: 13 + md5: 2e8a5d1925f287ae8bedc1ac8c8653a7.dir + size: 481905976 + nfiles: 34 train-lida-in-merged-basal@gnn-morphology: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/basal/graph-rd --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -18487,13 +18487,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-basal-perslay-deepwalk-stratified-k-fold - md5: d2ce0bde7a0b9fc492942a8c98a22c5b.dir - size: 3964834 - nfiles: 13 + md5: cf7135ae8ecc11a513f18231cc3a26ce.dir + size: 10681599 + nfiles: 34 train-lida-in-merged-all@gnn-morphology: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/all/graph-rd --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -18547,13 +18547,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-basal-cnn-tmd-stratified-k-fold - md5: 203b126b3f2ad7f486f357c642782996.dir - size: 16385967 - nfiles: 13 + md5: 84447cad52b5d7ac149d3044d2897e47.dir + size: 44845620 + nfiles: 34 train-lida-in-merged-all@cnn-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/all/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -18819,12 +18819,12 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-morphometrics/pc-L4-all-morphometrics-xgb-stratified-k-fold - md5: 047ef94e19b0816abb93d71aae03f480.dir - size: 871407 + md5: 2f4f1bba73390c943018aaa91b2a209b.dir + size: 2192623 nfiles: 1 features-morphometrics@pc-L5-all: cmd: morphoclass -vv morphometrics extract-features --dataset-csv ./data/final/pyramidal-cells/L5/dataset.csv @@ -18903,12 +18903,12 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-morphometrics/in-merged-all-morphometrics-xgb-stratified-k-fold - md5: c480ab6eab1303f806050fff927f4c60.dir - size: 3126127 + md5: 34fc033df57e06a36c738497fe5cb742.dir + size: 7789295 nfiles: 1 features-morphometrics@in-merged-bc-merged-all: cmd: morphoclass -vv morphometrics extract-features --dataset-csv ./data/final/IN_data_BC_merged.csv @@ -20221,13 +20221,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L6-axon-diagram-tmd-proj-perslay-stratified-k-fold - md5: fb6a64567c614740e9ad237638a9fca0.dir - size: 3425161 - nfiles: 13 + md5: e2cae577b4c0d90688d65db8896cdc4a.dir + size: 9381736 + nfiles: 34 train@in-L6-axon-graph-proj-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/axon/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20241,13 +20241,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L6-axon-graph-proj-gnn-stratified-k-fold - md5: 9f55069db06d067770d0267fa47123ee.dir - size: 9147580 - nfiles: 13 + md5: 663827abbe48e30c0325c9089caea047.dir + size: 25118997 + nfiles: 34 train@in-L6-axon-image-tmd-proj-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/axon/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20421,13 +20421,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-bc-merged-cnn-tmd-proj-stratified-k-fold - md5: 372765baf39a2006f2dbcf0fc60af3f9.dir - size: 16296952 - nfiles: 13 + md5: b2358891270fb47f5f42c827645af470.dir + size: 44658416 + nfiles: 34 train-lida-in-merged-bc-merged-proj@decision-tree-tmd-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/axon/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20581,13 +20581,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L5-basal-graph-rd-gnn-stratified-k-fold - md5: 80965bbd88562028bcd4e61cc451c669.dir - size: 9616434 - nfiles: 13 + md5: 3c4d5a5833f9c52497d43b5c2379afa5.dir + size: 26386142 + nfiles: 34 train-alt-neurites@in-L5-basal-graph-proj-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/basal/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20641,13 +20641,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L5-basal-image-deepwalk-decision-tree-stratified-k-fold - md5: d1b56ca9a462e25940ea8ea95ad7529c.dir - size: 47092517 - nfiles: 13 + md5: 498edd10b77ce85771bc307cd6c14230.dir + size: 129445588 + nfiles: 34 train-alt-neurites@in-L5-basal-image-deepwalk-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/basal/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20861,13 +20861,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-all-image-tmd-proj-decision-tree-stratified-k-fold - md5: b4b5b7d64578dd5969a900171f1ca247.dir - size: 39983044 - nfiles: 13 + md5: 6c41df4ddb79d30563548ffb86d81560.dir + size: 109942287 + nfiles: 34 train-alt-neurites@in-L1-all-image-tmd-proj-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/all/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21601,13 +21601,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-basal-diagram-tmd-proj-perslay-stratified-k-fold - md5: 3a37d9c904944e8e2cf5eb4a754f1ed9.dir - size: 3432248 - nfiles: 13 + md5: 4b72fe363a920fc2d798d77976f84820.dir + size: 9381789 + nfiles: 34 train-alt-neurites@in-L6-basal-graph-proj-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/basal/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21801,13 +21801,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-basal-cnn-tmd-proj-stratified-k-fold - md5: 071cf06ceb49bb19865263dd262f3b49.dir - size: 16388045 - nfiles: 13 + md5: 1abc44159eb06a1b3ef04c7a86befd3c.dir + size: 44844859 + nfiles: 34 train-lida-in-merged-basal-proj@decision-tree-tmd-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/basal/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -25214,3 +25214,876 @@ stages: - path: evaluation/pc-L4-basal-image-tmd-rd-xgb-stratified-k-fold.html md5: a46529f107e787d5f915fbd0ffa6f6f9 size: 10261 + evaluate-lida-in-merged-bc-merged@cnn-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-bc-merged-cnn-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-bc-merged-cnn-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-bc-merged-cnn-deepwalk-stratified-k-fold/checkpoint.chk + md5: 9b881ff0b7cacc5b61edf01f1edca1d4 + size: 35669867 + outs: + - path: evaluation/checkpoints-lida/in-merged-bc-merged-cnn-deepwalk-stratified-k-fold + md5: 63f6d727c6cfb61a7777a40d3356b110.dir + size: 9016751 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-bc-merged-cnn-deepwalk-stratified-k-fold.html + md5: d7d7592fc06c74666d823078e487e12a + size: 11517 + evaluate-alt-neurites@in-L4-all-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-all-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L4-all-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-all-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: f58e3665a22552209c883e3b716418fa + size: 17405280 + outs: + - path: evaluation/in-L4-all-graph-rd-gnn-stratified-k-fold + md5: 2b2ebc3fbb06b6739b63944c2df43f9e.dir + size: 9028963 + nfiles: 33 + - path: evaluation/in-L4-all-graph-rd-gnn-stratified-k-fold.html + md5: be5287ae03d742310e29f99e6f7ecdb1 + size: 13255 + evaluate@in-L5-axon-diagram-tmd-proj-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L5-axon-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L5-axon-diagram-tmd-proj-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L5-axon-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + md5: fce904119fc79fc44082c8cfffd6fe95 + size: 593521 + outs: + - path: evaluation/in-L5-axon-diagram-tmd-proj-perslay-stratified-k-fold + md5: f1eebdfc3f2c4189be7b88e6f60a8fe4.dir + size: 9027646 + nfiles: 33 + - path: evaluation/in-L5-axon-diagram-tmd-proj-perslay-stratified-k-fold.html + md5: 7d6b643fef6de9aee2cf545e1864164d + size: 13339 + evaluate-alt-neurites@in-L4-basal-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-basal-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L4-basal-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-basal-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: 559c181ed66bb7d5e9e3fa5eacffebcd + size: 600376 + outs: + - path: evaluation/in-L4-basal-diagram-deepwalk-perslay-stratified-k-fold + md5: 5ea83163a94877c8722760060ba9a6b6.dir + size: 9012869 + nfiles: 33 + - path: evaluation/in-L4-basal-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 4bf13ba60137659cae81221131ff37a3 + size: 13365 + evaluate-alt-neurites@pc-L4-basal-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-basal-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-basal-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L4-basal-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: 294495de6b74a4425c3722361d720745 + size: 16725986 + outs: + - path: evaluation/pc-L4-basal-graph-rd-gnn-stratified-k-fold + md5: 48ee7a012811140538785e8525af1354.dir + size: 8922046 + nfiles: 33 + - path: evaluation/pc-L4-basal-graph-rd-gnn-stratified-k-fold.html + md5: 6e6ee332dccfd4000312c745fdb900a9 + size: 10311 + evaluate-alt-neurites@in-L1-basal-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-basal-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L1-basal-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-basal-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: 27bc592976c179e959b3d695f8e1b2bf + size: 9319338 + outs: + - path: evaluation/in-L1-basal-image-deepwalk-cnn-stratified-k-fold + md5: f23e2aecd1806fe1a47a3dadf0623319.dir + size: 8988027 + nfiles: 33 + - path: evaluation/in-L1-basal-image-deepwalk-cnn-stratified-k-fold.html + md5: ded90a3fceb8084b384f6facfe4af4b2 + size: 12077 + evaluate-alt-neurites@in-L1-basal-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-basal-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L1-basal-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-basal-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 3e7364f9a31a00d8ad2a878590dec1d6 + size: 113531247 + outs: + - path: evaluation/in-L1-basal-image-deepwalk-decision-tree-stratified-k-fold + md5: 7b51754cc152a3a2d871639c0a03b5e0.dir + size: 8996007 + nfiles: 33 + - path: evaluation/in-L1-basal-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 148ed8c36edcbb11c8045a251c047e86 + size: 12120 + evaluate-janelia-L5@decision-tree-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/janelia-L5-decision-tree-tmd-stratified-k-fold/checkpoint.chk + evaluation/janelia-L5/decision-tree-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/janelia-L5-decision-tree-tmd-stratified-k-fold + md5: 94e2cfc58c6b76a047244002ab6734f9.dir + size: 72401472 + nfiles: 34 + outs: + - path: evaluation/janelia-L5/decision-tree-tmd-stratified-k-fold + md5: c90e5705a9ac34c0f9e97f251f554bde.dir + size: 8951153 + nfiles: 33 + - path: evaluation/janelia-L5/decision-tree-tmd-stratified-k-fold.html + md5: ee08c2a655e58dee1e8b422fa968b299 + size: 10668 + evaluate@in-L5-axon-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L5-axon-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L5-axon-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L5-axon-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: 8a4a931ff67a08dc7e7efae6e1306eef + size: 115537263 + outs: + - path: evaluation/in-L5-axon-image-tmd-rd-decision-tree-stratified-k-fold + md5: aee1353741d8f23ddd75269fab25d4a1.dir + size: 9014307 + nfiles: 33 + - path: evaluation/in-L5-axon-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: 3f5c5a4d2176b3c24aae6ea98ddf2ece + size: 13256 + evaluate-alt-neurites@pc-L6-basal-image-tmd-proj-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-basal-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-basal-image-tmd-proj-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-basal-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + md5: ded677260afb70b4c341070f885e933e + size: 11232173 + outs: + - path: evaluation/pc-L6-basal-image-tmd-proj-cnn-stratified-k-fold + md5: f67d43b794579c5306567e7758284e18.dir + size: 8993894 + nfiles: 33 + - path: evaluation/pc-L6-basal-image-tmd-proj-cnn-stratified-k-fold.html + md5: f56a864404f60b03b951a199892d6714 + size: 12077 + evaluate-lida-in-merged-basal-proj@cnn-tmd-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-basal-cnn-tmd-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-basal-cnn-tmd-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-basal-cnn-tmd-proj-stratified-k-fold/checkpoint.chk + md5: db04f63c38bae1d6bbb5a227447175c0 + size: 35849838 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-cnn-tmd-proj-stratified-k-fold + md5: 6b423bf75eb6ac54967ca8b53f2e9d49.dir + size: 8995181 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-cnn-tmd-proj-stratified-k-fold.html + md5: 57a63ac8b4ddd0230082a216c31a2c97 + size: 12661 + evaluate-janelia-L5-axon@cnn-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-axon-cnn-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-cnn-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-axon-cnn-tmd-stratified-k-fold/checkpoint.chk + md5: 5805b286322b1b7fa00fa3d146fd8e8d + size: 5243824 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-cnn-tmd-stratified-k-fold + md5: aff2b56d23d6407c7994a3ea65dc7a1d.dir + size: 8953263 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-cnn-tmd-stratified-k-fold.html + md5: 5debff6db6a425ca165718a59173798e + size: 10817 + evaluate@in-L23-axon-graph-proj-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L23-axon-graph-proj-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L23-axon-graph-proj-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L23-axon-graph-proj-gnn-stratified-k-fold/checkpoint.chk + md5: 51628b93ac9657e4c387a9ac5b4ca56a + size: 18402145 + outs: + - path: evaluation/in-L23-axon-graph-proj-gnn-stratified-k-fold + md5: f61fcfea78d7e707c2905a503713c8fd.dir + size: 9070810 + nfiles: 33 + - path: evaluation/in-L23-axon-graph-proj-gnn-stratified-k-fold.html + md5: bd7a551a5dc9baa2ea5f69a70b406068 + size: 13294 + evaluate@in-L6-axon-diagram-tmd-proj-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L6-axon-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L6-axon-diagram-tmd-proj-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L6-axon-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + md5: 9098044a07366dc7769017d45ac728b0 + size: 413121 + outs: + - path: evaluation/in-L6-axon-diagram-tmd-proj-perslay-stratified-k-fold + md5: 94e1958034bc9fd916d19b195af78dc7.dir + size: 8968775 + nfiles: 33 + - path: evaluation/in-L6-axon-diagram-tmd-proj-perslay-stratified-k-fold.html + md5: 0ea34e5ae434ebeaf703d4b6648e86cb + size: 11558 + evaluate-lida-in-merged-basal@cnn-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-basal-cnn-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-basal-cnn-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-basal-cnn-tmd-stratified-k-fold/checkpoint.chk + md5: 526d860300dbbdcde6ddc5942aac2164 + size: 35849455 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-cnn-tmd-stratified-k-fold + md5: a79c23587486e46d0b323238558ea2dc.dir + size: 8996325 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-cnn-tmd-stratified-k-fold.html + md5: 9684f18d034a902f1b881afc4840e4f2 + size: 12599 + evaluate-janelia-L5-axon@perslay-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-axon-perslay-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-perslay-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-axon-perslay-deepwalk-stratified-k-fold/checkpoint.chk + md5: f6cae1e640b9c614d476db19664b5ab6 + size: 396158 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-perslay-deepwalk-stratified-k-fold + md5: f39a7b9439bb8d4bb86253a58634ba7b.dir + size: 8943327 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-perslay-deepwalk-stratified-k-fold.html + md5: 610d857894ee5ca4733460cdd582f269 + size: 10956 + evaluate@pc-L2-apical-image-tmd-proj-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L2-apical-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-apical-image-tmd-proj-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L2-apical-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + md5: eda6aa652de4a72c77aba2170252118b + size: 48853679 + outs: + - path: evaluation/pc-L2-apical-image-tmd-proj-xgb-stratified-k-fold + md5: e79947aa49b4b79faf3277b3f7283d7d.dir + size: 8922087 + nfiles: 33 + - path: evaluation/pc-L2-apical-image-tmd-proj-xgb-stratified-k-fold.html + md5: e0578b9d6d921d822313bb6f9d0f8948 + size: 10287 + evaluate-lida-in-merged-basal@gnn-morphology: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-basal-gnn-morphology-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-basal-gnn-morphology-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-basal-gnn-morphology-stratified-k-fold/checkpoint.chk + md5: 316bb8d9c1da885878104f31c02c3d0c + size: 24569477 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-gnn-morphology-stratified-k-fold + md5: d84b66d07b4d86ee9119f698a07eb402.dir + size: 8994785 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-gnn-morphology-stratified-k-fold.html + md5: a47f5133e441e2265ae0391993a18166 + size: 12773 + evaluate-alt-neurites@in-L6-basal-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-basal-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L6-basal-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-basal-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: aba4fd87e7a3d2a2f7c7edb1a68df769 + size: 68306351 + outs: + - path: evaluation/in-L6-basal-image-tmd-rd-xgb-stratified-k-fold + md5: df6609ee04f45e8a5acc21b40a082dd2.dir + size: 8977957 + nfiles: 33 + - path: evaluation/in-L6-basal-image-tmd-rd-xgb-stratified-k-fold.html + md5: 036599e71730e85869993ab7b1cd9d17 + size: 11449 + evaluate-janelia-L5-basal@decision-tree-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-basal-decision-tree-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-decision-tree-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-basal-decision-tree-tmd-stratified-k-fold/checkpoint.chk + md5: c5734e44afb1a0d485d124b6696487fb + size: 58246447 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-decision-tree-tmd-stratified-k-fold + md5: 537edb9c841158d2279fc115fec06fa9.dir + size: 8941869 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-decision-tree-tmd-stratified-k-fold.html + md5: 74c3d724e5a8d2bb339f118508f35b18 + size: 10873 + evaluate@in-L5-axon-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L5-axon-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L5-axon-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L5-axon-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 05385e49072dde19f7a82543f1e636a3 + size: 116799151 + outs: + - path: evaluation/in-L5-axon-image-deepwalk-decision-tree-stratified-k-fold + md5: 5d1a14fb59d8160cac43b87a89e0ea19.dir + size: 9028036 + nfiles: 33 + - path: evaluation/in-L5-axon-image-deepwalk-decision-tree-stratified-k-fold.html + md5: b8f08d696318a41cb4e554ea4d870ca4 + size: 13282 + evaluate@pc-L5-apical-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L5-apical-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-apical-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L5-apical-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: fea0309037ff25db765aed2df8d1afb6 + size: 176658159 + outs: + - path: evaluation/pc-L5-apical-image-tmd-rd-decision-tree-stratified-k-fold + md5: 84c886be0358f385b7089e67411bda24.dir + size: 8957795 + nfiles: 33 + - path: evaluation/pc-L5-apical-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: 2567d3b0a71389dde7413cd2d4f0fee0 + size: 10906 + evaluate-alt-neurites@in-L1-all-image-tmd-proj-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-all-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L1-all-image-tmd-proj-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-all-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + md5: 3ebeaaa11d76f55d74719d86f84023c9 + size: 100942703 + outs: + - path: evaluation/in-L1-all-image-tmd-proj-decision-tree-stratified-k-fold + md5: a9ca4bd3e75d9993992e698e0aaf8c6c.dir + size: 8999744 + nfiles: 33 + - path: evaluation/in-L1-all-image-tmd-proj-decision-tree-stratified-k-fold.html + md5: 82ecbff6228a6515488484bd2bf83c96 + size: 12094 + evaluate-alt-neurites@pc-L3-basal-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-basal-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-basal-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-basal-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: b2c55827ed9cf7027ba2508464448537 + size: 3912747 + outs: + - path: evaluation/pc-L3-basal-image-tmd-rd-cnn-stratified-k-fold + md5: 7d549fb661eb2d2d8e2f5274ec52be83.dir + size: 8907751 + nfiles: 33 + - path: evaluation/pc-L3-basal-image-tmd-rd-cnn-stratified-k-fold.html + md5: 13926a7a994f2e9bb7416bd2a040b999 + size: 9675 + evaluate-lida-in-merged-all@decision-tree-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-all-decision-tree-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-all-decision-tree-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-all-decision-tree-tmd-stratified-k-fold/checkpoint.chk + md5: 6dff4e3d63970a715b58306c7d723233 + size: 414668591 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-decision-tree-tmd-stratified-k-fold + md5: 868c9ce2fc8e3ab604a7564fb7f96114.dir + size: 9006899 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-decision-tree-tmd-stratified-k-fold.html + md5: 457eedc1bbdd570cb1b37a455fd07a23 + size: 12616 + evaluate-alt-neurites@pc-L2-all-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-all-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-all-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-all-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: 384bf656914740a8545af3f12cf1c233 + size: 49360879 + outs: + - path: evaluation/pc-L2-all-image-deepwalk-xgb-stratified-k-fold + md5: ca3c626b9d2b09d64e11730838ea0fe2.dir + size: 8920224 + nfiles: 33 + - path: evaluation/pc-L2-all-image-deepwalk-xgb-stratified-k-fold.html + md5: 5028b4cb8366ce6bd1c357365c8d07ba + size: 10261 + evaluate@pc-L4-apical-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L4-apical-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-apical-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L4-apical-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: 225a5a35291b8ca9b1459295074023e6 + size: 498860 + outs: + - path: evaluation/pc-L4-apical-diagram-tmd-rd-perslay-stratified-k-fold + md5: 810e7cd4ca4aa765129362e2f511d4c5.dir + size: 8924733 + nfiles: 33 + - path: evaluation/pc-L4-apical-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: 04107a8dff95bfe7be362af8675fd3a7 + size: 10370 + evaluate-alt-neurites@in-L23-all-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-all-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L23-all-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-all-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: ee2edfcc2b3953a9edb74320316519ed + size: 13730989 + outs: + - path: evaluation/in-L23-all-image-deepwalk-cnn-stratified-k-fold + md5: 01c84404ef52ea5700cb6470adb18d0f.dir + size: 9076700 + nfiles: 33 + - path: evaluation/in-L23-all-image-deepwalk-cnn-stratified-k-fold.html + md5: 6d0dffe1ab4d7a93a6db77d90c6c41a6 + size: 13252 + evaluate-lida-in-merged-bc-merged-all-proj@gnn-morphology-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-gnn-morphology-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-gnn-morphology-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-gnn-morphology-proj-stratified-k-fold/checkpoint.chk + md5: 5f9b08ca028d70136a347a061ec3fa95 + size: 24506399 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-gnn-morphology-proj-stratified-k-fold + md5: 35c67bda0eafa4cdc1214637b503968d.dir + size: 9009097 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-gnn-morphology-proj-stratified-k-fold.html + md5: 42c9f39e4db296fbaf5be99406827f8a + size: 11751 + evaluate-alt-neurites@pc-L3-axon-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-axon-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-axon-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-axon-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: ebfdb49d1e34d3812a2998beb238c5d3 + size: 342837 + outs: + - path: evaluation/pc-L3-axon-diagram-tmd-rd-perslay-stratified-k-fold + md5: 5609164186042cf1c6653e08473d4d44.dir + size: 8906061 + nfiles: 33 + - path: evaluation/pc-L3-axon-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: 26ab7a4d8131994a803f1a0920989cbd + size: 9763 + evaluate-alt-neurites@pc-L4-axon-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-axon-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-axon-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L4-axon-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: c1187c39071028b78906b1a64930a573 + size: 16725969 + outs: + - path: evaluation/pc-L4-axon-graph-rd-gnn-stratified-k-fold + md5: 4f6da2c6be69cd7fd2531ff9393aa513.dir + size: 8933559 + nfiles: 33 + - path: evaluation/pc-L4-axon-graph-rd-gnn-stratified-k-fold.html + md5: 0cc35780ae7e4da200ce87c6474a16b3 + size: 10298 + evaluate-alt-neurites@pc-L6-all-image-tmd-proj-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-all-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-all-image-tmd-proj-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-all-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + md5: 311707e78e8cb6b2feb46bcc410c1de1 + size: 133448687 + outs: + - path: evaluation/pc-L6-all-image-tmd-proj-decision-tree-stratified-k-fold + md5: 158ad14470a4a088a237f90292d64595.dir + size: 9005270 + nfiles: 33 + - path: evaluation/pc-L6-all-image-tmd-proj-decision-tree-stratified-k-fold.html + md5: dd1c45837887e6614531a6208b9d1eb2 + size: 12094 + evaluate@pc-L6-apical-image-tmd-proj-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L6-apical-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-apical-image-tmd-proj-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L6-apical-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + md5: 0b8c8c7b8185ff6c7957eb4a43046a15 + size: 11313518 + outs: + - path: evaluation/pc-L6-apical-image-tmd-proj-cnn-stratified-k-fold + md5: d9aa6725438745c85489ea0be02e6e24.dir + size: 8985791 + nfiles: 33 + - path: evaluation/pc-L6-apical-image-tmd-proj-cnn-stratified-k-fold.html + md5: 9879476cf24d3b5c3a6046dd528848a0 + size: 12077 + evaluate-janelia-L5@perslay-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/janelia-L5-perslay-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/janelia-L5/perslay-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/janelia-L5-perslay-deepwalk-stratified-k-fold + md5: 84188477339ee87fb5af7a9659d49f98.dir + size: 9339193 + nfiles: 34 + outs: + - path: evaluation/janelia-L5/perslay-deepwalk-stratified-k-fold + md5: 7c23548fa84a8bf2a65d183a0816b9d3.dir + size: 8943327 + nfiles: 33 + - path: evaluation/janelia-L5/perslay-deepwalk-stratified-k-fold.html + md5: 6a578ca1dbd52a4a2750ebed751a550e + size: 10764 + evaluate-lida-in-merged-bc-merged@perslay-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-bc-merged-perslay-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-bc-merged-perslay-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-bc-merged-perslay-deepwalk-stratified-k-fold/checkpoint.chk + md5: 09504184f5cf677301eeae335c2cbaa2 + size: 1655917 + outs: + - path: evaluation/checkpoints-lida/in-merged-bc-merged-perslay-deepwalk-stratified-k-fold + md5: deaf333e677d538a33fe56e1794e10fd.dir + size: 8996596 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-bc-merged-perslay-deepwalk-stratified-k-fold.html + md5: 0ff73aaa498fba97ac218ebbc7d54ab2 + size: 11594 + evaluate@pc-L4-apical-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L4-apical-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-apical-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L4-apical-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: 7321180149f8fb1f5e9452beec0fedf2 + size: 7735213 + outs: + - path: evaluation/pc-L4-apical-image-deepwalk-cnn-stratified-k-fold + md5: 9a9302bc4aa5cd9133eaa9bcd1474566.dir + size: 8923455 + nfiles: 33 + - path: evaluation/pc-L4-apical-image-deepwalk-cnn-stratified-k-fold.html + md5: c9d98bf07aa0c19bd33df0adaa78c393 + size: 10295 + evaluate-alt-neurites@in-L1-all-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-all-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L1-all-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-all-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: f43a9b31cecde5b9571584bd213174b2 + size: 119595503 + outs: + - path: evaluation/in-L1-all-image-deepwalk-xgb-stratified-k-fold + md5: 17d605e752a2314f4017e5941c844ec5.dir + size: 8989694 + nfiles: 33 + - path: evaluation/in-L1-all-image-deepwalk-xgb-stratified-k-fold.html + md5: b3fa631b382aa5a4777069fd4a4c7458 + size: 12043 + evaluate-alt-neurites@pc-L3-all-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-all-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-all-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-all-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: d96a5d7ba9133327811c9eabdceb65ae + size: 15661318 + outs: + - path: evaluation/pc-L3-all-graph-rd-gnn-stratified-k-fold + md5: f0bdcbc5f3948bb5a43dd3687a23d447.dir + size: 8906548 + nfiles: 33 + - path: evaluation/pc-L3-all-graph-rd-gnn-stratified-k-fold.html + md5: b824389dec99d9d6b7b6c9233ced74de + size: 9691 + evaluate@in-L6-axon-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L6-axon-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L6-axon-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L6-axon-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: 396ffef5650d0c6ec3aa0b4dda24807a + size: 413116 + outs: + - path: evaluation/in-L6-axon-diagram-deepwalk-perslay-stratified-k-fold + md5: 29ac93e6b534d63cd054c29d92e0d414.dir + size: 8969209 + nfiles: 33 + - path: evaluation/in-L6-axon-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 3674a1571cb623f34bf1dfa1cb414774 + size: 11558 + evaluate-lida-in-merged-bc-merged-basal@decision-tree-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-decision-tree-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-decision-tree-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-decision-tree-deepwalk-stratified-k-fold/checkpoint.chk + md5: 54da6f55f3e91d4e36a4804cb0bb9287 + size: 451534639 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-decision-tree-deepwalk-stratified-k-fold + md5: 8f752d7236b846234ec56f873ab843ea.dir + size: 8998894 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-decision-tree-deepwalk-stratified-k-fold.html + md5: 5e0d86fe0f1613780927a846a43ec62f + size: 11646 + evaluate-janelia-L5@xgb-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/janelia-L5-xgb-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/janelia-L5/xgb-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/janelia-L5-xgb-deepwalk-stratified-k-fold + md5: f64cc0d7a08c48c3b25ac7e6ff991d67.dir + size: 71768257 + nfiles: 34 + outs: + - path: evaluation/janelia-L5/xgb-deepwalk-stratified-k-fold + md5: 27685086e6c1bd47624f097d471cf10b.dir + size: 8952754 + nfiles: 33 + - path: evaluation/janelia-L5/xgb-deepwalk-stratified-k-fold.html + md5: 530abd76a74a6ac313a615e26a3df7e3 + size: 10679 + evaluate@pc-L2-apical-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L2-apical-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-apical-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L2-apical-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: b68cd45ab7d84d1ce53c3da11763d121 + size: 44116719 + outs: + - path: evaluation/pc-L2-apical-image-deepwalk-decision-tree-stratified-k-fold + md5: bcf5b6af6670ba3e394e6b7494fd4e2f.dir + size: 8921460 + nfiles: 33 + - path: evaluation/pc-L2-apical-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 83edab7371faf116c475380af2b9fd47 + size: 10338 + evaluate-lida-in-merged-bc-merged-all@xgb-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-xgb-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-xgb-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-xgb-deepwalk-stratified-k-fold/checkpoint.chk + md5: fb5a1577094cdd4497e1c4c8a00125e6 + size: 470454959 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-xgb-deepwalk-stratified-k-fold + md5: 65d37132abc10d34c6e28b51228152ea.dir + size: 9008293 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-xgb-deepwalk-stratified-k-fold.html + md5: 69b4014ef21a72805fbe4dd9d6a9f64a + size: 11569 + evaluate-lida-in-merged-bc-merged-basal@perslay-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-perslay-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-perslay-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-perslay-tmd-stratified-k-fold/checkpoint.chk + md5: 135a017ce93002db1a5786aee1ab677e + size: 1656488 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-perslay-tmd-stratified-k-fold + md5: f52e5758cbfc63ca74a9783c35d1afc4.dir + size: 8996596 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-perslay-tmd-stratified-k-fold.html + md5: cdf3e7e24694c3c2bbf484369c506932 + size: 11618 + evaluate@in-L23-axon-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L23-axon-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L23-axon-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L23-axon-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: cc82136f4036377f189dacd5c144e83a + size: 751025 + outs: + - path: evaluation/in-L23-axon-diagram-deepwalk-perslay-stratified-k-fold + md5: 8ea742a00c61a7b376967391a25692b1.dir + size: 9078522 + nfiles: 33 + - path: evaluation/in-L23-axon-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 747cbccc3fff88ab42f729065131b18a + size: 13352 + evaluate-janelia-L5-all@decision-tree-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-all-decision-tree-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-decision-tree-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-all-decision-tree-deepwalk-stratified-k-fold/checkpoint.chk + md5: 3e60d93d6184a98fc07d1c33eaf09f2f + size: 64008303 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-decision-tree-deepwalk-stratified-k-fold + md5: f58415f897a4091dcf42322bdd32828f.dir + size: 8946246 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-decision-tree-deepwalk-stratified-k-fold.html + md5: 40f015cb5f6ba6ab8de36821d654f394 + size: 10909 + evaluate-alt-neurites@pc-L5-all-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-all-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-all-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-all-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: 042e58a8a0a086bbca0cf04f5edd86a4 + size: 746170 + outs: + - path: evaluation/pc-L5-all-diagram-deepwalk-perslay-stratified-k-fold + md5: 3cb5f6fcfd5508ec25f2796331899c23.dir + size: 8936285 + nfiles: 33 + - path: evaluation/pc-L5-all-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 6d62c4fe67216c03674a05126d4ac061 + size: 10964 + evaluate@pc-L5-apical-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L5-apical-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-apical-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L5-apical-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: b908e9d23c4a64478e7afc446aa8fbc2 + size: 13721519 + outs: + - path: evaluation/pc-L5-apical-image-deepwalk-cnn-stratified-k-fold + md5: a4dbade9880c84f8c050a00fc8f65748.dir + size: 8947136 + nfiles: 33 + - path: evaluation/pc-L5-apical-image-deepwalk-cnn-stratified-k-fold.html + md5: c3598b8da5ba4b4a3fccd9cc27345d22 + size: 10889 + evaluate-lida-in-merged@xgb-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-xgb-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-xgb-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-xgb-deepwalk-stratified-k-fold/checkpoint.chk + md5: 50be03d73f104d1794c34fed9b519e32 + size: 453274287 + outs: + - path: evaluation/checkpoints-lida/in-merged-xgb-deepwalk-stratified-k-fold + md5: 053e147a8df77e0fc48f6c8ff25d8e2a.dir + size: 8998041 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-xgb-deepwalk-stratified-k-fold.html + md5: ae7fdb411c942e97ddf31014c1488a1a + size: 12567 + evaluate@pc-L4-apical-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L4-apical-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-apical-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L4-apical-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: 442764edd10cab3735674acd50cb6e32 + size: 7734706 + outs: + - path: evaluation/pc-L4-apical-image-tmd-rd-cnn-stratified-k-fold + md5: 2a778421299d48d0289ab75915cc10df.dir + size: 8911810 + nfiles: 33 + - path: evaluation/pc-L4-apical-image-tmd-rd-cnn-stratified-k-fold.html + md5: 06d2eeedf7895dab8c3b71387f09420b + size: 10269 + evaluate-alt-neurites@in-L1-all-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-all-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L1-all-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-all-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: b24d4858048518ddd152794f476ba0b9 + size: 9319272 + outs: + - path: evaluation/in-L1-all-image-tmd-rd-cnn-stratified-k-fold + md5: 23f8ce559dbbe594aa1cb60ec2c2efde.dir + size: 8990740 + nfiles: 33 + - path: evaluation/in-L1-all-image-tmd-rd-cnn-stratified-k-fold.html + md5: 2199632ae4035a224c29939971823f3a + size: 12025 + evaluate-janelia-L5-axon@xgb-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-axon-xgb-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-xgb-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-axon-xgb-tmd-stratified-k-fold/checkpoint.chk + md5: 034219b8b2eadeae4ef0730a2ebafb65 + size: 62813999 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-xgb-tmd-stratified-k-fold + md5: 0402db2a48bff9aa12a8ff75bdf476a0.dir + size: 8942805 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-xgb-tmd-stratified-k-fold.html + md5: 152fed23fee84a89b4e8bb0487daf853 + size: 10809 + evaluate-alt-neurites@in-L6-basal-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-basal-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L6-basal-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-basal-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: 47a166b45ea69e886ba5eab8e4df517e + size: 70185519 + outs: + - path: evaluation/in-L6-basal-image-deepwalk-xgb-stratified-k-fold + md5: 0488dc39b66718e9d31bc9dddb47c4d1.dir + size: 8974817 + nfiles: 33 + - path: evaluation/in-L6-basal-image-deepwalk-xgb-stratified-k-fold.html + md5: cfe1faf2941854228dd81392988cbdc5 + size: 11475 + evaluate@in-L1-axon-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L1-axon-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L1-axon-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L1-axon-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: 5cdb261abb51c74f3819fb3524867632 + size: 9319420 + outs: + - path: evaluation/in-L1-axon-image-deepwalk-cnn-stratified-k-fold + md5: 7123d58fbb4cd20d0ad95445226d402f.dir + size: 8987431 + nfiles: 33 + - path: evaluation/in-L1-axon-image-deepwalk-cnn-stratified-k-fold.html + md5: be600083264afb42e8e856bf290210cf + size: 12051 + evaluate-alt-neurites@in-L5-basal-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-basal-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L5-basal-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-basal-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 0592d61c89d2ef36361233b5d2459809 + size: 120420271 + outs: + - path: evaluation/in-L5-basal-image-deepwalk-decision-tree-stratified-k-fold + md5: 7d97634fa3843ceceed211c91436fa9e.dir + size: 9025477 + nfiles: 33 + - path: evaluation/in-L5-basal-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 8407c1f49966ac9d69ee8b54660c00a0 + size: 13308 + evaluate-alt-neurites@in-L5-all-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-all-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L5-all-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-all-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 05786909a6858c24d1c3f56607be77f2 + size: 122303087 + outs: + - path: evaluation/in-L5-all-image-deepwalk-decision-tree-stratified-k-fold + md5: 651b4fc0ffd90983468192e8b966c444.dir + size: 9019961 + nfiles: 33 + - path: evaluation/in-L5-all-image-deepwalk-decision-tree-stratified-k-fold.html + md5: ff35fc5a7c758b99d26ec46fbc46ccc0 + size: 13282 + evaluate-alt-neurites@pc-L2-basal-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-basal-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-basal-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-basal-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: f573806a69d823211a20b2b00416f065 + size: 3913257 + outs: + - path: evaluation/pc-L2-basal-image-deepwalk-cnn-stratified-k-fold + md5: 5bb8b7ecab252f4d26ef564d7b7ad725.dir + size: 8920012 + nfiles: 33 + - path: evaluation/pc-L2-basal-image-deepwalk-cnn-stratified-k-fold.html + md5: 006886991fe460188ee515acdcc13c57 + size: 10295 + evaluate-lida-in-merged-bc-merged-all-proj@xgb-tmd-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-xgb-tmd-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-xgb-tmd-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-xgb-tmd-proj-stratified-k-fold/checkpoint.chk + md5: 003d4ec1c612612605fe4a90c57399ab + size: 407945327 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-xgb-tmd-proj-stratified-k-fold + md5: 0b001264da2888b4cc30c5e305eec80e.dir + size: 9016733 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-xgb-tmd-proj-stratified-k-fold.html + md5: 79efd244d594462a27bd5f21b0a7ce29 + size: 11569 From 2d043776a8bccbf9c92d27620a1ddcf6da89e852 Mon Sep 17 00:00:00 2001 From: Emilie Delattre Date: Tue, 8 Nov 2022 17:17:53 +0100 Subject: [PATCH 04/12] Update 3 --- dvc/dvc.lock | 635 ++++++++++++++++++++++++++++++++++++++++----------- 1 file changed, 505 insertions(+), 130 deletions(-) diff --git a/dvc/dvc.lock b/dvc/dvc.lock index dab2842..bb06e00 100644 --- a/dvc/dvc.lock +++ b/dvc/dvc.lock @@ -11687,13 +11687,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L5-axon-image-deepwalk-xgb-stratified-k-fold - md5: 34c71bd8ffc1527a7b17159e2486de35.dir - size: 47587408 - nfiles: 13 + md5: c1a279ed8b0313b240d3f59346a2256a.dir + size: 131007746 + nfiles: 34 train@pc-L4-apical-diagram-tmd-rd-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/apical/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11987,13 +11987,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L5-axon-image-deepwalk-cnn-stratified-k-fold - md5: e61f0649bf68c4b4cff98845adddf9d0.dir - size: 6940987 - nfiles: 13 + md5: 27eab32bea893ecfa5ab2c24941e68f9.dir + size: 19014092 + nfiles: 34 train@in-L5-axon-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/axon/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12687,13 +12687,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L5-apical-image-tmd-rd-xgb-stratified-k-fold - md5: c769eaa0d44fee312070a5be6a3ddc8e.dir - size: 68540613 - nfiles: 13 + md5: 1c3c5fb3b4f368f914f3f327955d594e.dir + size: 188517778 + nfiles: 34 train@in-L4-axon-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/axon/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12707,13 +12707,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-basal-image-tmd-rd-cnn-stratified-k-fold - md5: f3a957ddb8226b9d71195bad74de2ccc.dir - size: 6686664 - nfiles: 13 + md5: ba6abe009cdf5f62e72262fa19e68596.dir + size: 18304066 + nfiles: 34 train-alt-neurites@pc-L4-all-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/all/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13447,13 +13447,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L5-all-graph-rd-gnn-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-decision-tree-deepwalk-stratified-k-fold - md5: 0d0a6a67f922256842e1de5195d46ebf.dir - size: 165088260 - nfiles: 13 + md5: 1b5b9701fecfe91fd47709a8aeabd650.dir + size: 453801425 + nfiles: 34 train-alt-neurites@pc-L6-axon-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/axon/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15007,13 +15007,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L4-axon-image-tmd-rd-decision-tree-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L3-all-image-deepwalk-decision-tree-stratified-k-fold - md5: d5e9a651bbdee9f833b60c5b9b70a41e.dir - size: 20875981 - nfiles: 13 + md5: a078911acb6e6b88b0aadccfc0a3fd8b.dir + size: 57379473 + nfiles: 34 train-alt-neurites@pc-L3-axon-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L3/axon/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16287,13 +16287,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L4-axon-diagram-deepwalk-perslay-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-cnn-tmd-stratified-k-fold - md5: 438b1dd67df64263049d4313275f17d2.dir - size: 16300385 - nfiles: 13 + md5: 1b811e5f8bbc6140c066d06e7bc649f4.dir + size: 44684445 + nfiles: 34 train-lida-in-merged-bc-merged-basal@xgb-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/basal/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -17687,13 +17687,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/janelia-L5-axon-decision-tree-deepwalk-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-basal-cnn-deepwalk-stratified-k-fold - md5: 301615570a25963fe90c317057d4a3e4.dir - size: 16392929 - nfiles: 13 + md5: 69ef9b74a3ec73958adfaa74c4ace433.dir + size: 44859305 + nfiles: 34 train-lida-in-merged-all@perslay-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/all/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -18567,13 +18567,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-all-cnn-deepwalk-stratified-k-fold - md5: b134081ad8164d0cd4cae11cc2571528.dir - size: 16388857 - nfiles: 13 + md5: a628a634998ab3c3dafafee8f9fd8d40.dir + size: 44861122 + nfiles: 34 features-morphometrics@in-L1-all: cmd: morphoclass -vv morphometrics extract-features --dataset-csv ./data/final/interneurons/L1/dataset.csv --morphometrics-config ./extract-features-morphometrics/configs/morphometrics_config_all.yaml @@ -20541,13 +20541,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L5-basal-diagram-tmd-rd-perslay-stratified-k-fold - md5: 59eceb0fb53f7bdd8b2e3ca5688d1c19.dir - size: 3539245 - nfiles: 13 + md5: 22d063a1b39665194256bab10937d7d2.dir + size: 9620268 + nfiles: 34 train-alt-neurites@in-L5-basal-diagram-tmd-proj-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/basal/diagram-tmd-proj --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21561,13 +21561,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-all-image-tmd-proj-decision-tree-stratified-k-fold - md5: 584e35d8eea0d652a7a557bd3c7efc81.dir - size: 25934567 - nfiles: 13 + md5: 65ee76f25dfa8094bb73028d2c8b5004.dir + size: 71279397 + nfiles: 34 train-alt-neurites@in-L6-all-image-tmd-proj-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/all/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21681,13 +21681,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-basal-image-tmd-proj-xgb-stratified-k-fold - md5: 2330e153a391880cd6b7c302d456c64a.dir - size: 27554010 - nfiles: 13 + md5: 9f1b6ba93e3732650e9e3d6be3ce48c9.dir + size: 75894149 + nfiles: 34 train-lida-in-merged-all-proj@cnn-tmd-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/all/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -26087,3 +26087,378 @@ stages: - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-xgb-tmd-proj-stratified-k-fold.html md5: 79efd244d594462a27bd5f21b0a7ce29 size: 11569 + evaluate-alt-neurites@in-L1-basal-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-basal-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L1-basal-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-basal-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: 05ca3027b5e8e6efc29a6c62eb885903 + size: 17170187 + outs: + - path: evaluation/in-L1-basal-graph-rd-gnn-stratified-k-fold + md5: bbf1ffe7284604ae95e6c2120807562b.dir + size: 8987599 + nfiles: 33 + - path: evaluation/in-L1-basal-graph-rd-gnn-stratified-k-fold.html + md5: 50d78272902f7207d5839cb9dd4d824a + size: 12093 + evaluate-lida-in-merged@decision-tree-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-decision-tree-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-decision-tree-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-decision-tree-deepwalk-stratified-k-fold/checkpoint.chk + md5: d9c4cef64dc29a66087e3fe14bd678c6 + size: 444800303 + outs: + - path: evaluation/checkpoints-lida/in-merged-decision-tree-deepwalk-stratified-k-fold + md5: 49de71fc856eff28995545a7686314bc.dir + size: 9001282 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-decision-tree-deepwalk-stratified-k-fold.html + md5: a9d8791f8c6c20bb89040b6bef6667f3 + size: 12618 + evaluate-janelia-L5-all@perslay-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-all-perslay-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-perslay-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-all-perslay-deepwalk-stratified-k-fold/checkpoint.chk + md5: 8c1a4dcab286ba3fa560df5bf108f033 + size: 396216 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-perslay-deepwalk-stratified-k-fold + md5: 4e6f5a0fe76c4ecc560c7986e2f6cb46.dir + size: 8943327 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-perslay-deepwalk-stratified-k-fold.html + md5: 134fd6bd2ccf6cc991b4438138b19c5d + size: 10943 + evaluate-alt-neurites@pc-L6-axon-graph-proj-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-axon-graph-proj-gnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-axon-graph-proj-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-axon-graph-proj-gnn-stratified-k-fold/checkpoint.chk + md5: 0d737e59309c8d9f49c62070971bdb8a + size: 17703333 + outs: + - path: evaluation/pc-L6-axon-graph-proj-gnn-stratified-k-fold + md5: f8b980bf0c87ad54bafbb7b649246a20.dir + size: 8995934 + nfiles: 33 + - path: evaluation/pc-L6-axon-graph-proj-gnn-stratified-k-fold.html + md5: 0de7615cbaaaf83046fe3ff0d5425de3 + size: 12106 + evaluate-alt-neurites@in-L6-all-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-all-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L6-all-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-all-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: 1af06c1552015c08f7c517756676820c + size: 413178 + outs: + - path: evaluation/in-L6-all-diagram-tmd-rd-perslay-stratified-k-fold + md5: 1530ac0f2d906fd13cd8772d1ff616a3.dir + size: 8968775 + nfiles: 33 + - path: evaluation/in-L6-all-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: b612c36d9c8bb94724c3946536c1355b + size: 11532 + evaluate-alt-neurites@in-L1-basal-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-basal-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L1-basal-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-basal-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: 4ff15085fc2284debe63d8d9b8fbb26b + size: 9319402 + outs: + - path: evaluation/in-L1-basal-image-tmd-rd-cnn-stratified-k-fold + md5: 2820a3304ddf53de3746dc3b740e2f51.dir + size: 8984824 + nfiles: 33 + - path: evaluation/in-L1-basal-image-tmd-rd-cnn-stratified-k-fold.html + md5: e1ad1d39ce27d34051fb642860d68580 + size: 12051 + evaluate-alt-neurites@in-L4-basal-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-basal-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L4-basal-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-basal-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: a3fc8a0b2cb353702c97665ec1b4a3a5 + size: 10154355 + outs: + - path: evaluation/in-L4-basal-image-deepwalk-cnn-stratified-k-fold + md5: 9e5c4961acac558d980ffb6131e54555.dir + size: 9024546 + nfiles: 33 + - path: evaluation/in-L4-basal-image-deepwalk-cnn-stratified-k-fold.html + md5: f5d6257d5aad68cdc170b2046de8006e + size: 13265 + evaluate-alt-neurites@pc-L3-all-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-all-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-all-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-all-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: 433d847129ede5a996fb0fb3275e89c2 + size: 3912548 + outs: + - path: evaluation/pc-L3-all-image-deepwalk-cnn-stratified-k-fold + md5: 333ab09161cf336ad81dbf88384fe696.dir + size: 8901662 + nfiles: 33 + - path: evaluation/pc-L3-all-image-deepwalk-cnn-stratified-k-fold.html + md5: c01e169ed03f80e07905a847b79f9dd6 + size: 9675 + evaluate@in-L5-axon-image-tmd-proj-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L5-axon-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L5-axon-image-tmd-proj-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L5-axon-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + md5: 7597c24551a7d357ce25c3dfd27028d0 + size: 113549743 + outs: + - path: evaluation/in-L5-axon-image-tmd-proj-decision-tree-stratified-k-fold + md5: bb23cc355770bbffaa7bc6ed8e9b9937.dir + size: 9020781 + nfiles: 33 + - path: evaluation/in-L5-axon-image-tmd-proj-decision-tree-stratified-k-fold.html + md5: e36f5261ba8e65bc95c67a93994cb01a + size: 13282 + evaluate-alt-neurites@in-L23-basal-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-basal-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L23-basal-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-basal-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: cb100d53f79969ebe1417d7dbca19936 + size: 156128431 + outs: + - path: evaluation/in-L23-basal-image-tmd-rd-xgb-stratified-k-fold + md5: 5ba78e19e9cf698cc0fba46a52272f32.dir + size: 9076085 + nfiles: 33 + - path: evaluation/in-L23-basal-image-tmd-rd-xgb-stratified-k-fold.html + md5: cd4b7408ab6a2fb7916245e3a94f08df + size: 13244 + evaluate-alt-neurites@in-L5-all-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-all-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L5-all-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-all-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: 5e8b968a66c44be41d1e54c418aa476b + size: 17358400 + outs: + - path: evaluation/in-L5-all-graph-rd-gnn-stratified-k-fold + md5: 9cc412c3cb2c030eb734b9baac5a8f35.dir + size: 9020901 + nfiles: 33 + - path: evaluation/in-L5-all-graph-rd-gnn-stratified-k-fold.html + md5: e65ed08bf9b6288b3336f9a58e2a33af + size: 13255 + evaluate@pc-L3-apical-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L3-apical-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-apical-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L3-apical-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: a18655478c999e99d4361789a700156a + size: 50445039 + outs: + - path: evaluation/pc-L3-apical-image-tmd-rd-xgb-stratified-k-fold + md5: 947059eb04849bd00e260656de0c3a34.dir + size: 8900333 + nfiles: 33 + - path: evaluation/pc-L3-apical-image-tmd-rd-xgb-stratified-k-fold.html + md5: 5a80e58777b7ba928f690d4e2dc9e6ce + size: 9667 + evaluate-alt-neurites@pc-L4-axon-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-axon-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-axon-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L4-axon-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: 9d6cab39cebe02a41b652f31e2647d42 + size: 95504815 + outs: + - path: evaluation/pc-L4-axon-image-tmd-rd-decision-tree-stratified-k-fold + md5: 957f58d784d8d3cf309e7506b6e55b32.dir + size: 8930703 + nfiles: 33 + - path: evaluation/pc-L4-axon-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: f4786a19a886537d6a7b4d0a710bc9bd + size: 10299 + evaluate-alt-neurites@pc-L5-all-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-all-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-all-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-all-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: fb83e50bf114abd47b3beabd1e4bc490 + size: 18392998 + outs: + - path: evaluation/pc-L5-all-graph-rd-gnn-stratified-k-fold + md5: 1ca51eefb15f1d03af6096df6658943b.dir + size: 8949383 + nfiles: 33 + - path: evaluation/pc-L5-all-graph-rd-gnn-stratified-k-fold.html + md5: 53ff4299da75bd5432b755547a553660 + size: 10879 + evaluate@in-L5-axon-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L5-axon-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L5-axon-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L5-axon-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: a628c0106158e867924628bde4637f23 + size: 9987625 + outs: + - path: evaluation/in-L5-axon-image-deepwalk-cnn-stratified-k-fold + md5: afcaaafe8eddd4a2576874ff32b3f762.dir + size: 9026627 + nfiles: 33 + - path: evaluation/in-L5-axon-image-deepwalk-cnn-stratified-k-fold.html + md5: 911bc449348829cd687717fdd648a4e6 + size: 13239 + evaluate@pc-L5-apical-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L5-apical-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-apical-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L5-apical-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 27bac877f07d3a51f0cf362fd8a6e5e9 + size: 165016943 + outs: + - path: evaluation/pc-L5-apical-image-deepwalk-decision-tree-stratified-k-fold + md5: 21acef5328951131b89d236da8dc69d2.dir + size: 8959165 + nfiles: 33 + - path: evaluation/pc-L5-apical-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 7494fefa1a9b07be6b3c582d225d17ce + size: 10932 + evaluate-alt-neurites@pc-L4-basal-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-basal-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-basal-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L4-basal-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: 7787bd03f6dcb8fac8f24210dc5990b2 + size: 98281263 + outs: + - path: evaluation/pc-L4-basal-image-deepwalk-xgb-stratified-k-fold + md5: 96f9f6e126a0a0ec811330ecbec25c79.dir + size: 8915742 + nfiles: 33 + - path: evaluation/pc-L4-basal-image-deepwalk-xgb-stratified-k-fold.html + md5: 39190d0e612b3f733e9746bfde04d74e + size: 10287 + evaluate-alt-neurites@pc-L2-basal-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-basal-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-basal-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-basal-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 52d93d174cafa466f51f5091fdedfa45 + size: 47474735 + outs: + - path: evaluation/pc-L2-basal-image-deepwalk-decision-tree-stratified-k-fold + md5: f781f32a4709572100313d2c82095ae4.dir + size: 8918596 + nfiles: 33 + - path: evaluation/pc-L2-basal-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 2fddc7e27c0929e443ce97baa80123c4 + size: 10338 + evaluate@in-L23-axon-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L23-axon-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L23-axon-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L23-axon-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: f2361600537bb0084972fe57334669f6 + size: 160501039 + outs: + - path: evaluation/in-L23-axon-image-tmd-rd-xgb-stratified-k-fold + md5: 4381402c292a77f69241cc6186badd98.dir + size: 9073008 + nfiles: 33 + - path: evaluation/in-L23-axon-image-tmd-rd-xgb-stratified-k-fold.html + md5: 8d789259d072ccb2302f4f23f0134a0f + size: 13218 + evaluate-alt-neurites@in-L6-all-image-tmd-proj-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-all-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L6-all-image-tmd-proj-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-all-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + md5: 94671aa0f172e368991c41296a683263 + size: 62306159 + outs: + - path: evaluation/in-L6-all-image-tmd-proj-decision-tree-stratified-k-fold + md5: 49556757f0c32f6ed01febf41f562402.dir + size: 8973398 + nfiles: 33 + - path: evaluation/in-L6-all-image-tmd-proj-decision-tree-stratified-k-fold.html + md5: e48cc9197b64c4ad4de4cfcd8d9c01c4 + size: 11500 + evaluate-alt-neurites@in-L5-basal-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-basal-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L5-basal-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-basal-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: a96b247699a7b93dffb17c2c8a803e36 + size: 593486 + outs: + - path: evaluation/in-L5-basal-diagram-tmd-rd-perslay-stratified-k-fold + md5: 0d347a6b11ed56049774e07c1995a24d.dir + size: 9026942 + nfiles: 33 + - path: evaluation/in-L5-basal-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: 47bf05175a62b2970bd5063100a4f648 + size: 13339 + evaluate-alt-neurites@pc-L3-basal-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-basal-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-basal-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-basal-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: aa8c758bbfe5a536f12e33e70b85ec5c + size: 342901 + outs: + - path: evaluation/pc-L3-basal-diagram-tmd-rd-perslay-stratified-k-fold + md5: 5dd1d7ef382cfc22fb4dc9ca3a1cc731.dir + size: 8896017 + nfiles: 33 + - path: evaluation/pc-L3-basal-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: 9a78543acf8628d287421085c9c10f58 + size: 9776 + evaluate-alt-neurites@pc-L5-axon-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-axon-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-axon-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-axon-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: aae982404a30f155b23a637456c89732 + size: 164653295 + outs: + - path: evaluation/pc-L5-axon-image-deepwalk-decision-tree-stratified-k-fold + md5: b091daa15db2aa378a83a35aab656d85.dir + size: 8947865 + nfiles: 33 + - path: evaluation/pc-L5-axon-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 3b22407a73f8a83228f00205255dae60 + size: 10919 + evaluate-alt-neurites@in-L6-basal-image-tmd-proj-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-basal-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L6-basal-image-tmd-proj-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-basal-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + md5: cb17e4f99f89627e0ee8f9335c930b1f + size: 66915887 + outs: + - path: evaluation/in-L6-basal-image-tmd-proj-xgb-stratified-k-fold + md5: 0f4ca83684d90d007dae424713e1e89c.dir + size: 8978422 + nfiles: 33 + - path: evaluation/in-L6-basal-image-tmd-proj-xgb-stratified-k-fold.html + md5: 042caf50c4d58e428b0bf2c05f2a0a85 + size: 11475 + evaluate-alt-neurites@in-L4-all-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-all-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L4-all-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-all-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 55a63cc30a9dd012cb1c6e28d53efe78 + size: 124438831 + outs: + - path: evaluation/in-L4-all-image-deepwalk-decision-tree-stratified-k-fold + md5: cb23a742e6a98c573c425a26deccbc67.dir + size: 9013920 + nfiles: 33 + - path: evaluation/in-L4-all-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 786aa8dd95dd42501381ba8663f6170c + size: 13282 From 88d95f2e6c44d77b430d462c792a35d1a52a5f48 Mon Sep 17 00:00:00 2001 From: Emilie Delattre Date: Wed, 9 Nov 2022 08:37:21 +0100 Subject: [PATCH 05/12] New Update --- dvc/dvc.lock | 135 +++++++++++++++++++++++++++++++++++++++++++++------ 1 file changed, 120 insertions(+), 15 deletions(-) diff --git a/dvc/dvc.lock b/dvc/dvc.lock index bb06e00..626a04a 100644 --- a/dvc/dvc.lock +++ b/dvc/dvc.lock @@ -13527,13 +13527,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L5-all-image-deepwalk-decision-tree-stratified-k-fold - md5: 87a1495a8f18bbfe05eabf1e18b4eb38.dir - size: 67441446 - nfiles: 13 + md5: 3861374e5536822a9c4eea52dc6f0169.dir + size: 185372396 + nfiles: 34 train-alt-neurites@pc-L5-basal-image-tmd-rd-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L5/basal/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20481,13 +20481,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-bc-merged-perslay-tmd-proj-stratified-k-fold - md5: 054762ebaedc7a41f2cc55d9c28abefe.dir - size: 3918392 - nfiles: 13 + md5: 47c7296665a719068c6418d6735662d6.dir + size: 10652981 + nfiles: 34 train-lida-in-merged-bc-merged-proj@xgb-tmd-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/axon/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21061,13 +21061,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L23-all-image-tmd-proj-decision-tree-stratified-k-fold - md5: 42382402aac4467ad0319ca5c94bd487.dir - size: 59520252 - nfiles: 13 + md5: 90a2ba28a69eeddabcfdac39cda9355e.dir + size: 163595053 + nfiles: 34 train-alt-neurites@in-L23-all-image-tmd-proj-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/all/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -26462,3 +26462,108 @@ stages: - path: evaluation/in-L4-all-image-deepwalk-decision-tree-stratified-k-fold.html md5: 786aa8dd95dd42501381ba8663f6170c size: 13282 + evaluate-alt-neurites@in-L6-all-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-all-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L6-all-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-all-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: 3e30fd14a7686c20344c879c2ceefbef + size: 62567151 + outs: + - path: evaluation/in-L6-all-image-tmd-rd-decision-tree-stratified-k-fold + md5: 82cde6d2a8e4491044bc28f7c97a059a.dir + size: 8968902 + nfiles: 33 + - path: evaluation/in-L6-all-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: ccfae20dd758bbd7027b8ecb22afa69d + size: 11474 + evaluate-alt-neurites@in-L5-basal-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-basal-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L5-basal-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-basal-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: 4e13402e5cb1b00819a837fa3e3e5d3b + size: 114684975 + outs: + - path: evaluation/in-L5-basal-image-tmd-rd-xgb-stratified-k-fold + md5: ef5645bc6be215dfc4e1028c9ee98501.dir + size: 9020963 + nfiles: 33 + - path: evaluation/in-L5-basal-image-tmd-rd-xgb-stratified-k-fold.html + md5: cc765f45a5fb4e1eb49619442d2ce88b + size: 13231 + evaluate-alt-neurites@in-L4-basal-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-basal-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L4-basal-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-basal-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: 1461b36b6844feb4ea9512dec0dbf1a2 + size: 120469231 + outs: + - path: evaluation/in-L4-basal-image-tmd-rd-xgb-stratified-k-fold + md5: 625d0084250907ebf276980b91619643.dir + size: 9033218 + nfiles: 33 + - path: evaluation/in-L4-basal-image-tmd-rd-xgb-stratified-k-fold.html + md5: 82e917f0d731ae73ed7da56e078b9ba4 + size: 13231 + evaluate-lida-in-merged-basal@perslay-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-basal-perslay-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-basal-perslay-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-basal-perslay-deepwalk-stratified-k-fold/checkpoint.chk + md5: 15fedfc86d8fe9c7f72fd7957b50ab5c + size: 1677497 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-perslay-deepwalk-stratified-k-fold + md5: 64ee9530daff61d30f029cf0d27f5e8e.dir + size: 9004262 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-perslay-deepwalk-stratified-k-fold.html + md5: 77c26a365fc2795520ec8a6cfe7c75da + size: 12737 + evaluate@in-L4-axon-image-tmd-proj-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L4-axon-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L4-axon-image-tmd-proj-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L4-axon-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + md5: 0bbc732e3d03ee564c0e36af9a668f36 + size: 116909935 + outs: + - path: evaluation/in-L4-axon-image-tmd-proj-xgb-stratified-k-fold + md5: dce0f5f2edc122ce1c0f9f02b0be9664.dir + size: 9023693 + nfiles: 33 + - path: evaluation/in-L4-axon-image-tmd-proj-xgb-stratified-k-fold.html + md5: 41074197485df37078b82c217302a497 + size: 13231 + evaluate-alt-neurites@in-L23-all-image-tmd-proj-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-all-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L23-all-image-tmd-proj-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-all-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + md5: 85df83ff7a61815a4e96d075002cc038 + size: 154522223 + outs: + - path: evaluation/in-L23-all-image-tmd-proj-decision-tree-stratified-k-fold + md5: 698bee47309cc5a1730f564e51ec962d.dir + size: 9072990 + nfiles: 33 + - path: evaluation/in-L23-all-image-tmd-proj-decision-tree-stratified-k-fold.html + md5: 61b11befd6e9bf4adb51093eb97f4e29 + size: 13295 + evaluate-alt-neurites@pc-L5-all-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-all-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-all-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-all-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 64ed0082a4804c816f54727e7772b63a + size: 176423407 + outs: + - path: evaluation/pc-L5-all-image-deepwalk-decision-tree-stratified-k-fold + md5: 601eba41a85f2a4b38f21f708d4e7250.dir + size: 8949149 + nfiles: 33 + - path: evaluation/pc-L5-all-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 744ead1808943c845dd9c5488821a270 + size: 10906 From 7bd21af0a886f695d9d51efb68729bde9853fb9a Mon Sep 17 00:00:00 2001 From: Emilie Delattre Date: Wed, 9 Nov 2022 11:47:36 +0100 Subject: [PATCH 06/12] New update --- dvc/dvc.lock | 386 ++++++++++++++++++++++++++++++++++++++++++++------- 1 file changed, 336 insertions(+), 50 deletions(-) diff --git a/dvc/dvc.lock b/dvc/dvc.lock index 626a04a..f55990f 100644 --- a/dvc/dvc.lock +++ b/dvc/dvc.lock @@ -7844,13 +7844,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/janelia-L5-perslay-tmd-stratified-k-fold - md5: 817fac7e10d41086ee166814217f1ece.dir - size: 3419882 - nfiles: 13 + md5: 50a872c2493ffdc2c129e4dd5d71de2f.dir + size: 9341095 + nfiles: 34 train-janelia-L5@xgb-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-janelia-L5/apical/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11867,13 +11867,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L4-apical-graph-rd-gnn-stratified-k-fold - md5: c84d5902ec8fb73de741d50d05516e55.dir - size: 9362100 - nfiles: 13 + md5: 33d64ac734341a10355dc48c64f1a45b.dir + size: 25650209 + nfiles: 34 train@pc-L5-apical-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L5/apical/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12967,13 +12967,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L3-basal-image-deepwalk-cnn-stratified-k-fold - md5: 62544e2b110fef064b26be5af2124b96.dir - size: 4678900 - nfiles: 13 + md5: 0a144d96c679e0649053ab036d12189d.dir + size: 12818725 + nfiles: 34 train-alt-neurites@pc-L6-basal-graph-proj-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/basal/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13827,13 +13827,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L2-axon-image-deepwalk-cnn-stratified-k-fold - md5: 0df66a8756a49bf3905f836c27904447.dir - size: 4621734 - nfiles: 13 + md5: be04c90ac23d7cbef95934f484fe8ce4.dir + size: 12670019 + nfiles: 34 train-alt-neurites@in-L1-all-image-deepwalk-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/all/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15827,13 +15827,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L4-basal-image-deepwalk-cnn-stratified-k-fold - md5: 9f206e5f06bf466aec3fd80420b018f8.dir - size: 6076783 - nfiles: 13 + md5: 4a2dfab3ceb54e6fb936499e27e07fc6.dir + size: 16652626 + nfiles: 34 train-alt-neurites@pc-L3-axon-image-tmd-rd-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L3/axon/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16047,13 +16047,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L3-all-diagram-tmd-rd-perslay-stratified-k-fold - md5: e16bd0c4ffcfb93596797fdc4df8694d.dir - size: 3399486 - nfiles: 13 + md5: b9aa2a5b25622ab37d5c24b7dc877bd1.dir + size: 9248729 + nfiles: 34 train-alt-neurites@pc-L2-axon-image-tmd-proj-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/axon/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -18347,13 +18347,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-basal-xgb-tmd-stratified-k-fold - md5: 6f52cfce228b7478f375f758d1cc80a7.dir - size: 155125079 - nfiles: 13 + md5: 6da38333280a3a8475c3928fb4cb5037.dir + size: 427223603 + nfiles: 34 train-lida-in-merged-basal@decision-tree-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/basal/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20001,13 +20001,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L23-axon-image-tmd-proj-xgb-stratified-k-fold - md5: e5de8c6d031690d92b8b4c111fbc1b65.dir - size: 61266987 - nfiles: 13 + md5: dd2d119a4a2d77b7e408d1b71c27f7ad.dir + size: 168588576 + nfiles: 34 train@in-L4-axon-diagram-tmd-proj-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/axon/diagram-tmd-proj --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20601,13 +20601,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L5-basal-graph-proj-gnn-stratified-k-fold - md5: d69267e4eebd574c17ee340c1c5a7452.dir - size: 9613286 - nfiles: 13 + md5: 8a1307db48b4f2d2856717758b797595.dir + size: 26376278 + nfiles: 34 train-alt-neurites@in-L5-basal-image-deepwalk-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/basal/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20821,13 +20821,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-all-graph-proj-gnn-stratified-k-fold - md5: 0adea406f568c14316086efba9a907b4.dir - size: 9535005 - nfiles: 13 + md5: bc33e05527e26f096e35441994a82d41.dir + size: 26171997 + nfiles: 34 train-alt-neurites@in-L1-all-image-tmd-proj-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/all/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -26567,3 +26567,289 @@ stages: - path: evaluation/pc-L5-all-image-deepwalk-decision-tree-stratified-k-fold.html md5: 744ead1808943c845dd9c5488821a270 size: 10906 + evaluate-alt-neurites@in-L5-basal-graph-proj-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-basal-graph-proj-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L5-basal-graph-proj-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-basal-graph-proj-gnn-stratified-k-fold/checkpoint.chk + md5: 0dbc856c2feec0ecd2dc7b7adcdbe3b8 + size: 17358818 + outs: + - path: evaluation/in-L5-basal-graph-proj-gnn-stratified-k-fold + md5: 2e5d61a27b6826e41f7a406629a2a5a0.dir + size: 9017620 + nfiles: 33 + - path: evaluation/in-L5-basal-graph-proj-gnn-stratified-k-fold.html + md5: 7b05634ad030d967c6c04f350b365a47 + size: 13307 + evaluate-alt-neurites@pc-L3-all-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-all-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-all-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-all-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: 96b3ce7fbf1f04c4bbb42af825d2f617 + size: 342828 + outs: + - path: evaluation/pc-L3-all-diagram-tmd-rd-perslay-stratified-k-fold + md5: ffdcdd03c9bc9112c0957a3feac0d163.dir + size: 8906061 + nfiles: 33 + - path: evaluation/pc-L3-all-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: 3b5fec2d431e67c3424eb360b2e7fd47 + size: 9750 + evaluate@pc-L4-apical-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L4-apical-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-apical-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L4-apical-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: ebf9e2154c9f347249b8cfe426e0be86 + size: 16725385 + outs: + - path: evaluation/pc-L4-apical-graph-rd-gnn-stratified-k-fold + md5: 49354172f954d45f8baeb448b0968248.dir + size: 8924984 + nfiles: 33 + - path: evaluation/pc-L4-apical-graph-rd-gnn-stratified-k-fold.html + md5: 425c3798c0b0a574a0a03c8148180101 + size: 10311 + evaluate-alt-neurites@pc-L3-basal-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-basal-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-basal-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-basal-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: a9681784ee4e1a2cbf2f1ab7566b5c1d + size: 3912620 + outs: + - path: evaluation/pc-L3-basal-image-deepwalk-cnn-stratified-k-fold + md5: c01af653426b394523902351e5a7416e.dir + size: 8906265 + nfiles: 33 + - path: evaluation/pc-L3-basal-image-deepwalk-cnn-stratified-k-fold.html + md5: 17adfe5eda9386c44a52fd77cd3a05a4 + size: 9701 + evaluate-alt-neurites@in-L4-all-image-tmd-proj-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-all-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L4-all-image-tmd-proj-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-all-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + md5: 557968c6a4bb61bd69abd194b3826f9f + size: 111974319 + outs: + - path: evaluation/in-L4-all-image-tmd-proj-decision-tree-stratified-k-fold + md5: a2efc94fe108a4991764f046b26e20db.dir + size: 9017284 + nfiles: 33 + - path: evaluation/in-L4-all-image-tmd-proj-decision-tree-stratified-k-fold.html + md5: 9eb1174d41ab0afed2b86af72a594e7d + size: 13282 + evaluate-alt-neurites@in-L23-all-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-all-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L23-all-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-all-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: 5b3e66e93be4ddca19248c047577dc9a + size: 155076143 + outs: + - path: evaluation/in-L23-all-image-tmd-rd-decision-tree-stratified-k-fold + md5: 08e086967868c31e1877a107532bc59f.dir + size: 9073626 + nfiles: 33 + - path: evaluation/in-L23-all-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: 10774d8abb5dd142e6f9b81aa29d3523 + size: 13269 + evaluate-alt-neurites@pc-L4-basal-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-basal-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-basal-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L4-basal-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: acccfe29b9dcce39f866a7dd21bfe2cb + size: 7735339 + outs: + - path: evaluation/pc-L4-basal-image-deepwalk-cnn-stratified-k-fold + md5: e724417539c1a42911b7a06f369bb298.dir + size: 8917447 + nfiles: 33 + - path: evaluation/pc-L4-basal-image-deepwalk-cnn-stratified-k-fold.html + md5: e3da3c87667ff86001ada0cf8564856c + size: 10295 + evaluate-alt-neurites@in-L23-all-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-all-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L23-all-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-all-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: cf19c73832b4693795591ed646e3e669 + size: 18402923 + outs: + - path: evaluation/in-L23-all-graph-rd-gnn-stratified-k-fold + md5: ade5363ca060ec9f17ca8ffdf70ce204.dir + size: 9073747 + nfiles: 33 + - path: evaluation/in-L23-all-graph-rd-gnn-stratified-k-fold.html + md5: 2e68b7ae91d8cd91cf6aa4867116705a + size: 13268 + evaluate@in-L23-axon-image-tmd-proj-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L23-axon-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L23-axon-image-tmd-proj-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L23-axon-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + md5: 881c2a11c36bef40cd10e18bd4411559 + size: 159526319 + outs: + - path: evaluation/in-L23-axon-image-tmd-proj-xgb-stratified-k-fold + md5: b6505692072b72f9cc4b6f96ab09e0a8.dir + size: 9062417 + nfiles: 33 + - path: evaluation/in-L23-axon-image-tmd-proj-xgb-stratified-k-fold.html + md5: 54bc614797272955ce6b09c2d3a50744 + size: 13244 + evaluate-lida-in-merged-basal@cnn-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-basal-cnn-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-basal-cnn-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-basal-cnn-deepwalk-stratified-k-fold/checkpoint.chk + md5: 30bdfe0bd6ae269c844a756a6f7a190f + size: 35850863 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-cnn-deepwalk-stratified-k-fold + md5: 5fa6485317c9e2752912b2871de7cffb.dir + size: 9008602 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-cnn-deepwalk-stratified-k-fold.html + md5: 8a6c6f13ffe05ea3e348df2eaeca9122 + size: 12661 + evaluate-alt-neurites@in-L6-basal-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-basal-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L6-basal-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-basal-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: 21306dbaf28fd7eacc7fa69aa717f1c6 + size: 413172 + outs: + - path: evaluation/in-L6-basal-diagram-tmd-rd-perslay-stratified-k-fold + md5: 6baf16586bf2dcdc42fccc8b417187ef.dir + size: 8967298 + nfiles: 33 + - path: evaluation/in-L6-basal-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: 90c05228ac0560e109ac9c8b13bcd0c8 + size: 11558 + evaluate-lida-in-merged-bc-merged-basal@cnn-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-cnn-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-cnn-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-cnn-tmd-stratified-k-fold/checkpoint.chk + md5: 1bcbc91d2f33c46a786e591057079e7b + size: 35668280 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-cnn-tmd-stratified-k-fold + md5: 7c1fb03fc6c4a2f31183482089d749f8.dir + size: 9016325 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-cnn-tmd-stratified-k-fold.html + md5: ebbfd837124b93016fcc459b3867d15b + size: 11541 + evaluate-lida-in-merged@decision-tree-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-decision-tree-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-decision-tree-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-decision-tree-tmd-stratified-k-fold/checkpoint.chk + md5: abac084aae902ca4fb5f795d321ba3f8 + size: 415957103 + outs: + - path: evaluation/checkpoints-lida/in-merged-decision-tree-tmd-stratified-k-fold + md5: 2420cad79f99fe31761b6e95f59a42d4.dir + size: 9008706 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-decision-tree-tmd-stratified-k-fold.html + md5: 7d3d6ee92ada1f555ca73e90c2e77396 + size: 12556 + evaluate@in-L4-axon-diagram-tmd-proj-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L4-axon-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L4-axon-diagram-tmd-proj-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L4-axon-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + md5: 3360ceba7306c3393791bb04a1921363 + size: 600394 + outs: + - path: evaluation/in-L4-axon-diagram-tmd-proj-perslay-stratified-k-fold + md5: d8d588596f534667e5e4b45e751bdd2e.dir + size: 9012869 + nfiles: 33 + - path: evaluation/in-L4-axon-diagram-tmd-proj-perslay-stratified-k-fold.html + md5: 8fdfa120fcaf9a57186ed3fb222f4225 + size: 13339 + evaluate-janelia-L5@decision-tree-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/janelia-L5-decision-tree-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/janelia-L5/decision-tree-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/janelia-L5-decision-tree-deepwalk-stratified-k-fold + md5: 84e6683cb95b77454770ebc2a34db182.dir + size: 69267844 + nfiles: 34 + outs: + - path: evaluation/janelia-L5/decision-tree-deepwalk-stratified-k-fold + md5: 2dde4550f455100b7302f2062b027509.dir + size: 8949365 + nfiles: 33 + - path: evaluation/janelia-L5/decision-tree-deepwalk-stratified-k-fold.html + md5: c3caca7d1e873796b98165010d9f6faf + size: 10730 + evaluate-alt-neurites@in-L5-all-diagram-tmd-proj-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-all-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L5-all-diagram-tmd-proj-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-all-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + md5: a8036f1b133125382a0aca1a8abdd5c5 + size: 593394 + outs: + - path: evaluation/in-L5-all-diagram-tmd-proj-perslay-stratified-k-fold + md5: 68bd85f0ebd3ca059a602e6650afa18e.dir + size: 9026942 + nfiles: 33 + - path: evaluation/in-L5-all-diagram-tmd-proj-perslay-stratified-k-fold.html + md5: 8aa0207f4c2f667fc0a0964ff2fe65c8 + size: 13339 + evaluate-alt-neurites@pc-L6-axon-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-axon-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-axon-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-axon-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: b48967755111dc75d0a0b29b94654a36 + size: 11232428 + outs: + - path: evaluation/pc-L6-axon-image-deepwalk-cnn-stratified-k-fold + md5: fa1579adba09e8cb7596693c95f0a5e4.dir + size: 8998277 + nfiles: 33 + - path: evaluation/pc-L6-axon-image-deepwalk-cnn-stratified-k-fold.html + md5: effb9a4fa594203a4f5e454c68abe1cc + size: 12063 + evaluate-alt-neurites@pc-L6-axon-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-axon-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-axon-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-axon-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: 403666193969e1f1235c9f676e34559d + size: 130632751 + outs: + - path: evaluation/pc-L6-axon-image-deepwalk-xgb-stratified-k-fold + md5: c931d999298c9876182dd82adb52e28f.dir + size: 8999760 + nfiles: 33 + - path: evaluation/pc-L6-axon-image-deepwalk-xgb-stratified-k-fold.html + md5: 75a2481a6a270c2cda9464ab23bd2b6c + size: 12056 + evaluate-lida-in-merged-bc-merged-all-proj@perslay-tmd-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-perslay-tmd-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-perslay-tmd-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-perslay-tmd-proj-stratified-k-fold/checkpoint.chk + md5: 2b28db49c85d7e1469120b21ea745266 + size: 1656375 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-perslay-tmd-proj-stratified-k-fold + md5: 764f65e10c681350ee5fa2988cfb5d15.dir + size: 8996596 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-perslay-tmd-proj-stratified-k-fold.html + md5: 98a727e7e35ab64ab40f71fdcd9f9d6d + size: 11654 From ce2193c870e6a32f2b579b2160b036c3a1213fed Mon Sep 17 00:00:00 2001 From: Emilie Delattre Date: Wed, 9 Nov 2022 14:07:14 +0100 Subject: [PATCH 07/12] Update again --- dvc/dvc.lock | 87 ++++++++++++++++++++++++++++++---------------------- 1 file changed, 51 insertions(+), 36 deletions(-) diff --git a/dvc/dvc.lock b/dvc/dvc.lock index f55990f..6d17485 100644 --- a/dvc/dvc.lock +++ b/dvc/dvc.lock @@ -12127,13 +12127,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L5-axon-image-tmd-rd-xgb-stratified-k-fold - md5: b43c85c72712cfaaf121d522c288401d.dir - size: 47004930 - nfiles: 13 + md5: d0da840c4bd42e034361110004a04456.dir + size: 129351821 + nfiles: 34 train@pc-L2-apical-graph-proj-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/apical/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12447,13 +12447,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L1-axon-image-tmd-rd-xgb-stratified-k-fold - md5: a5d94904868496fef7b21e2fea9b5887.dir - size: 44273462 - nfiles: 13 + md5: a731081854b24b755b08b58f92f3d4bf.dir + size: 121927033 + nfiles: 34 train@in-L6-axon-image-tmd-rd-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/axon/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -18595,12 +18595,12 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-morphometrics/in-L1-all-morphometrics-xgb-stratified-k-fold - md5: 01c1c26a625021bff447d8603a07b536.dir - size: 1557743 + md5: 86f7e83db29018ffef68a2ad973675d6.dir + size: 4153839 nfiles: 1 features-morphometrics@in-L23-all: cmd: morphoclass -vv morphometrics extract-features --dataset-csv ./data/final/interneurons/L23/dataset.csv @@ -18623,12 +18623,12 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-morphometrics/in-L23-all-morphometrics-xgb-stratified-k-fold - md5: 69a275dfb88a9b47e1d1f30e226eea0d.dir - size: 2145135 + md5: eabf40a61ba53b0f5eabdd6d04e674ea.dir + size: 5601839 nfiles: 1 features-morphometrics@in-L4-all: cmd: morphoclass -vv morphometrics extract-features --dataset-csv ./data/final/interneurons/L4/dataset.csv @@ -18651,12 +18651,12 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-morphometrics/in-L4-all-morphometrics-xgb-stratified-k-fold - md5: 071065b78eddea415c03ca395f650e6e.dir - size: 1929967 + md5: 5f0d757380bfc70f052202a5c32c1ab0.dir + size: 5087535 nfiles: 1 features-morphometrics@in-L5-all: cmd: morphoclass -vv morphometrics extract-features --dataset-csv ./data/final/interneurons/L5/dataset.csv @@ -18791,12 +18791,12 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-morphometrics/pc-L3-all-morphometrics-xgb-stratified-k-fold - md5: cdc3e8be5c798481a746820e0edfaeff.dir - size: 495983 + md5: e309fc6b7725f5c4118128df47e9ff21.dir + size: 1218927 nfiles: 1 features-morphometrics@pc-L4-all: cmd: morphoclass -vv morphometrics extract-features --dataset-csv ./data/final/pyramidal-cells/L4/dataset.csv @@ -20201,13 +20201,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L5-axon-image-tmd-proj-xgb-stratified-k-fold - md5: 1302e0da69a683e12dbdfe424a70b050.dir - size: 46229126 - nfiles: 13 + md5: b942fc800171185b37f22712d5a2f77a.dir + size: 127240337 + nfiles: 34 train@in-L6-axon-diagram-tmd-proj-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/axon/diagram-tmd-proj --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21881,13 +21881,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-basal-xgb-tmd-proj-stratified-k-fold - md5: a762eaf14a47794f1339f038e3db6e6c.dir - size: 153196582 - nfiles: 13 + md5: 28b88e53ae0822923dc166ea54e6b9a7.dir + size: 421885295 + nfiles: 34 train-lida-in-merged-bc-merged-all-proj@cnn-tmd-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/all/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -26853,3 +26853,18 @@ stages: - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-perslay-tmd-proj-stratified-k-fold.html md5: 98a727e7e35ab64ab40f71fdcd9f9d6d size: 11654 + evaluate-lida-in-merged-bc-merged-proj@perslay-tmd-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-bc-merged-perslay-tmd-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-bc-merged-perslay-tmd-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-bc-merged-perslay-tmd-proj-stratified-k-fold/checkpoint.chk + md5: 1d14b07cb9744a1c7e5c43aacfb8e536 + size: 1656545 + outs: + - path: evaluation/checkpoints-lida/in-merged-bc-merged-perslay-tmd-proj-stratified-k-fold + md5: cea2a7e57ccff4d0ead0659e568b4594.dir + size: 8996596 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-bc-merged-perslay-tmd-proj-stratified-k-fold.html + md5: 7a9d97990401a30229d1601c388b0875 + size: 11594 From 2eeefd79bbcac2a5e8e714fc2e7fad70a300293e Mon Sep 17 00:00:00 2001 From: Emilie Delattre Date: Thu, 10 Nov 2022 08:38:17 +0100 Subject: [PATCH 08/12] Update again --- dvc/dvc.lock | 3512 ++++++++++++++++++++++++++++++++++++++++++++------ 1 file changed, 3152 insertions(+), 360 deletions(-) diff --git a/dvc/dvc.lock b/dvc/dvc.lock index 6d17485..b805c86 100644 --- a/dvc/dvc.lock +++ b/dvc/dvc.lock @@ -7201,13 +7201,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-perslay-tmd-stratified-k-fold - md5: 64d2a306f9a5ebe31424eb9502099285.dir - size: 3964132 - nfiles: 13 + md5: 050c1d842836cb25ff3b3a795ac1e448.dir + size: 10681342 + nfiles: 34 train-lida-in-merged-bc-merged@cnn-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/axon/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -7261,13 +7261,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-bc-merged-cnn-tmd-stratified-k-fold - md5: 53e64bda42b556321d8c6de7029dd8d5.dir - size: 16304479 - nfiles: 13 + md5: e1a15eaf114eb87e54b30278a8576541.dir + size: 44685365 + nfiles: 34 train-lida-in-merged@decisiontree-tmd: cmd: morphoclass -v train --dataset-config training/extra-configs/lida-in-merged.yaml --model-config training/configs/model-decisiontree-tmd.yaml --splitter-config @@ -7493,13 +7493,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida/in-merged-bc-merged-perslay-tmd-stratified-k-fold - md5: f2b9719f231d6eec502528782158d8f3.dir - size: 3917297 - nfiles: 13 + md5: 6e07506ca16d0056280ce5669fc25e81.dir + size: 10653331 + nfiles: 34 preprocess-dataset@pyramidal-cells: cmd: "morphoclass -v preprocess-dataset --dataset-type pyramidal-cells --morphologies-dir\ \ data/raw/pyramidal-cells/morphologies --db-file data/raw/pyramidal-cells/neurondb.dat\ @@ -11287,13 +11287,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L4-axon-image-deepwalk-xgb-stratified-k-fold - md5: 7dfae25d9171ce08abf45228c2b326dc.dir - size: 48476301 - nfiles: 13 + md5: 986da731e6ebb258d7e62a799b2d4afb.dir + size: 133501491 + nfiles: 34 train@in-L4-axon-image-tmd-rd-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/axon/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11307,13 +11307,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L4-axon-image-tmd-rd-cnn-stratified-k-fold - md5: 46902e2bce152035a5e0361c47466f57.dir - size: 7004399 - nfiles: 13 + md5: 502091f2679c027e6da3c0b42c708147.dir + size: 19181706 + nfiles: 34 train@pc-L4-apical-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/apical/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11567,13 +11567,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L6-apical-image-tmd-proj-decision-tree-stratified-k-fold - md5: e484c67c991e0d45845207759c268381.dir - size: 53480848 - nfiles: 13 + md5: 34ea687f403d084c1fbeb73b191c44a6.dir + size: 147009847 + nfiles: 34 train@in-L1-axon-image-deepwalk-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/axon/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11627,13 +11627,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L23-axon-diagram-tmd-rd-perslay-stratified-k-fold - md5: 152ee05349079517427462b1d18bdac6.dir - size: 3612924 - nfiles: 13 + md5: 41adf3d554daf21daf4c31e2198f1327.dir + size: 9829394 + nfiles: 34 train@in-L23-axon-graph-rd-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/axon/graph-rd --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11787,13 +11787,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L6-axon-diagram-tmd-rd-perslay-stratified-k-fold - md5: 6521a3fc52c28d0f8610175b10323c7e.dir - size: 3432557 - nfiles: 13 + md5: e05ff1313a243964f11aa559e8c80899.dir + size: 9381729 + nfiles: 34 train@pc-L4-apical-image-deepwalk-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/apical/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11827,13 +11827,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L23-axon-image-tmd-rd-decision-tree-stratified-k-fold - md5: 7c295d11aa7f63daf16038e9630cd2ff.dir - size: 59868269 - nfiles: 13 + md5: a3559cfa57bcf2dd32efb1f05fcb3234.dir + size: 164549093 + nfiles: 34 train@pc-L2-apical-image-tmd-proj-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/apical/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -11947,13 +11947,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L4-axon-image-tmd-rd-decision-tree-stratified-k-fold - md5: d5e5d7217a8c3244ef23cdc45b25f2a1.dir - size: 44266383 - nfiles: 13 + md5: 47178025423ab739d61e46602701c53d.dir + size: 121704087 + nfiles: 34 train@in-L6-axon-image-deepwalk-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/axon/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12167,13 +12167,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L1-axon-diagram-deepwalk-perslay-stratified-k-fold - md5: 67668332a200a91971b4751b92731323.dir - size: 3506343 - nfiles: 13 + md5: 906de35fe48814a1e73494d175948a10.dir + size: 9553526 + nfiles: 34 train@pc-L2-apical-image-deepwalk-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/apical/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12207,13 +12207,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L2-apical-diagram-deepwalk-perslay-stratified-k-fold - md5: 26c6c4e197b40753f1d2b5042d6c0e2f.dir - size: 3388144 - nfiles: 13 + md5: 22046baa616a4df47fa045f2e8bf0cf6.dir + size: 9263379 + nfiles: 34 train@in-L23-axon-image-tmd-rd-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/axon/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12227,13 +12227,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L23-axon-image-tmd-rd-cnn-stratified-k-fold - md5: 08b08483bd19ae5c399818caf8a72f90.dir - size: 8346710 - nfiles: 13 + md5: 79b237cb559161a6be7089385d66bf70.dir + size: 22794773 + nfiles: 34 train@in-L1-axon-graph-rd-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/axon/graph-rd --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12407,13 +12407,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L3-apical-image-tmd-rd-decision-tree-stratified-k-fold - md5: 9717258fc73cc9a954f67c2113f70c00.dir - size: 21212694 - nfiles: 13 + md5: 5d18495a3fe8b2480925a1287b4de829.dir + size: 58270559 + nfiles: 34 train@pc-L3-apical-graph-rd-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L3/apical/graph-rd --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12747,13 +12747,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/pc-L6-apical-image-deepwalk-decision-tree-stratified-k-fold - md5: 9f47f547b7e9fb521141df594b15ce40.dir - size: 51300356 - nfiles: 13 + md5: 8c4590087a76f11783bd32292c1d17fe.dir + size: 140997093 + nfiles: 34 train@in-L4-axon-diagram-tmd-rd-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/axon/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12867,13 +12867,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L5-axon-image-tmd-rd-cnn-stratified-k-fold - md5: 9c64c92492d8537405decf7bc2a6ea11.dir - size: 6937532 - nfiles: 13 + md5: 36fa6a27072bdea4d135a726771465ef.dir + size: 19009553 + nfiles: 34 train-alt-neurites@in-L4-all-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/all/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -12987,13 +12987,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L6-basal-graph-proj-gnn-stratified-k-fold - md5: b860db1d9fdda1c68c369358d217f034.dir - size: 9735726 - nfiles: 13 + md5: a2e00470367c3bb57d16653e38b0ff65.dir + size: 26723028 + nfiles: 34 train-alt-neurites@in-L6-basal-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/basal/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13107,13 +13107,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L3-axon-graph-rd-gnn-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L3-basal-graph-rd-gnn-stratified-k-fold - md5: a79cda32a65f844edc1924da32201a33.dir - size: 8950717 - nfiles: 13 + md5: c33ba1407649a5a268e2768021cd9e29.dir + size: 24565747 + nfiles: 34 train-alt-neurites@pc-L4-all-image-tmd-rd-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/all/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13667,13 +13667,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L3-basal-image-deepwalk-xgb-stratified-k-fold - md5: cc247ed990a7b2c6b529dc367c7f8f90.dir - size: 21330119 - nfiles: 13 + md5: 1a5fa65ab33e7b87393db5145bf0bc73.dir + size: 58661772 + nfiles: 34 train-alt-neurites@in-L1-basal-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/basal/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13727,13 +13727,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L23-basal-image-deepwalk-cnn-stratified-k-fold - md5: a725cfcba75d5211624c2e856adbcee9.dir - size: 8335130 - nfiles: 13 + md5: 495a9b6d51dd5e31bc6eac54963714a5.dir + size: 22804865 + nfiles: 34 train-alt-neurites@pc-L6-basal-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/basal/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13807,13 +13807,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L6-basal-image-deepwalk-cnn-stratified-k-fold - md5: ce75e9d722fb9d872bbf19425efdaf44.dir - size: 7423530 - nfiles: 13 + md5: 00e3b8e3a4d9851d324a7de1dafb83e0.dir + size: 20308406 + nfiles: 34 train-alt-neurites@pc-L2-axon-image-deepwalk-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/axon/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13847,13 +13847,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-all-image-deepwalk-cnn-stratified-k-fold - md5: fa92fcfa3e3b9d7da659f5492de51a82.dir - size: 6685279 - nfiles: 13 + md5: b71704fd67563c7f64db137f81930f47.dir + size: 18315118 + nfiles: 34 train-alt-neurites@in-L4-basal-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/basal/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -13927,13 +13927,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-basal-image-tmd-rd-xgb-stratified-k-fold - md5: 993ca5ff84a3f4afedf205cbd6e72485.dir - size: 44615577 - nfiles: 13 + md5: cfec964508467630ac605c7f80d0bae9.dir + size: 122865457 + nfiles: 34 train-alt-neurites@in-L23-all-image-tmd-rd-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/all/image-tmd-rd --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14107,13 +14107,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L5-axon-diagram-deepwalk-perslay-stratified-k-fold - md5: 9ade0de6614ca01f84e602ebc3c66b59.dir - size: 3540690 - nfiles: 13 + md5: e04cd652db3ec28ae4e2dd723dd98713.dir + size: 9682222 + nfiles: 34 train-alt-neurites@pc-L5-all-diagram-tmd-rd-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L5/all/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14167,13 +14167,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-all-image-tmd-rd-xgb-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L2-basal-image-tmd-proj-xgb-stratified-k-fold - md5: 66c776213c5e666d89497be27ef82a17.dir - size: 20052550 - nfiles: 13 + md5: ffc24fc452c7b1b2a04238752efc6ed2.dir + size: 55179817 + nfiles: 34 train-alt-neurites@pc-L5-all-image-tmd-rd-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L5/all/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14567,13 +14567,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-basal-image-deepwalk-cnn-stratified-k-fold - md5: 2c6c685e0b65df60cf0d9429f17099f2.dir - size: 5332567 - nfiles: 13 + md5: 9440791186b6b6f66487b7f1f955a32c.dir + size: 14632922 + nfiles: 34 train-alt-neurites@pc-L6-all-graph-proj-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/all/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14607,13 +14607,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L2-axon-image-deepwalk-xgb-stratified-k-fold - md5: 3763e5eb5af3626a8daacb2a9de9417b.dir - size: 19308978 - nfiles: 13 + md5: 80a097ce1a0cb1b43b36f423c727083e.dir + size: 53093599 + nfiles: 34 train-alt-neurites@in-L23-basal-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/basal/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14707,13 +14707,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L5-axon-graph-rd-gnn-stratified-k-fold - md5: 1e938400afbd48c5b85759c289245f8b.dir - size: 9979480 - nfiles: 13 + md5: 604284f398dcb463ea64dc29532fb3c1.dir + size: 27341487 + nfiles: 34 train-alt-neurites@pc-L5-axon-image-deepwalk-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L5/axon/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14867,13 +14867,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L6-axon-image-tmd-proj-xgb-stratified-k-fold - md5: 0f0b1df15b36b3bef26d0a056f3bc5be.dir - size: 50803216 - nfiles: 13 + md5: f6bfb9eaaa75b3fd210c7b397297400e.dir + size: 139904874 + nfiles: 34 train-alt-neurites@in-L4-all-image-deepwalk-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/all/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14907,13 +14907,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L2-basal-diagram-tmd-proj-perslay-stratified-k-fold - md5: 115eaebf2b251d562d96ac761463b0bd.dir - size: 3392193 - nfiles: 13 + md5: 57c7714b7aa9bfe3a4c7580567544476.dir + size: 9263843 + nfiles: 34 train-alt-neurites@in-L6-basal-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/basal/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -14927,13 +14927,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-basal-image-deepwalk-decision-tree-stratified-k-fold - md5: 2efb01873827bbe2b98fec32dcadda66.dir - size: 27704093 - nfiles: 13 + md5: b52c3db91f4655672d4c967e85fc6367.dir + size: 76143343 + nfiles: 34 train-alt-neurites@pc-L2-axon-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/axon/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15307,13 +15307,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L2-basal-graph-proj-gnn-stratified-k-fold - md5: 1ca3a3cf595688b6a00d1bed8fa0aa75.dir - size: 8963033 - nfiles: 13 + md5: c23709ad9893d37563b79108cc35cfe6.dir + size: 24587030 + nfiles: 34 train-alt-neurites@pc-L6-all-image-deepwalk-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/all/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15347,13 +15347,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-all-image-tmd-rd-xgb-stratified-k-fold - md5: 809a398babb976a78c37e36ce6a2717e.dir - size: 27020677 - nfiles: 13 + md5: 59f557e75cba76aa12935757151c97b2.dir + size: 74355040 + nfiles: 34 train-alt-neurites@pc-L3-axon-diagram-tmd-rd-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L3/axon/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15407,13 +15407,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-all-graph-rd-gnn-stratified-k-fold - md5: cdf1fb4c3d53feaeaec1969764aca067.dir - size: 9532360 - nfiles: 13 + md5: 8254b6f76522a07a387237e070843ebe.dir + size: 26172439 + nfiles: 34 train-janelia-L5@decision-tree-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-janelia-L5/apical/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15607,13 +15607,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L23-basal-diagram-deepwalk-perslay-stratified-k-fold - md5: e4b2db8f0da1a9788830a86999405b5c.dir - size: 3612864 - nfiles: 13 + md5: 838a395e1310c7c94cb56714f7d303a1.dir + size: 9829769 + nfiles: 34 train-alt-neurites@in-L4-all-diagram-tmd-rd-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/all/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15767,13 +15767,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-basal-image-deepwalk-xgb-stratified-k-fold - md5: 9644373e32b6e4c9a3b02c720f865fd2.dir - size: 49077717 - nfiles: 13 + md5: 341fb36f029b2c804e2257904a2324b6.dir + size: 135160681 + nfiles: 34 train-alt-neurites@in-L5-all-graph-rd-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/all/graph-rd --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -15987,13 +15987,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-basal-image-deepwalk-xgb-stratified-k-fold - md5: e0eb37aabd99a3d5a1879e61332d4340.dir - size: 46023168 - nfiles: 13 + md5: bf06d8526fa11062e153f6d6fddf85c0.dir + size: 126812295 + nfiles: 34 train-alt-neurites@in-L23-all-image-tmd-rd-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/all/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16067,13 +16067,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L2-axon-image-tmd-proj-xgb-stratified-k-fold - md5: e9e11b6cf8591927c2d8fa2bd8c709c2.dir - size: 19128328 - nfiles: 13 + md5: 1d1ea06f9440681b454f318b99963d2e.dir + size: 52632530 + nfiles: 34 train-alt-neurites@pc-L4-basal-graph-rd-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/basal/graph-rd --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16147,13 +16147,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L5-axon-image-tmd-rd-cnn-stratified-k-fold - md5: 95f917e931a4dfb9fcae51161a26230f.dir - size: 8277623 - nfiles: 13 + md5: a1489b777f1f40083b5fc671368f7668.dir + size: 22671052 + nfiles: 34 train-alt-neurites@in-L1-all-image-tmd-rd-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/all/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16207,13 +16207,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L3-all-diagram-deepwalk-perslay-stratified-k-fold - md5: 8ed12c866e9c2e1c1c2e7dd4b55209e0.dir - size: 3399476 - nfiles: 13 + md5: a1361a864fc5c3027a1a2d6c3caa34a2.dir + size: 9248755 + nfiles: 34 train-alt-neurites@pc-L5-basal-image-tmd-rd-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L5/basal/image-tmd-rd --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16507,13 +16507,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L4-axon-diagram-tmd-rd-perslay-stratified-k-fold - md5: d04dccf188cba09c8978a7c1ded093c3.dir - size: 3462095 - nfiles: 13 + md5: 528bb34de7176045e5da6048ba472b05.dir + size: 9424372 + nfiles: 34 train-alt-neurites@pc-L6-axon-image-deepwalk-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/axon/image-deepwalk --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16687,13 +16687,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L23-all-diagram-deepwalk-perslay-stratified-k-fold - md5: eb1df98719d19b21ece18c0ab714cb30.dir - size: 3612546 - nfiles: 13 + md5: ffe777dc1c8197d0920ab1c68bcb64c7.dir + size: 9829516 + nfiles: 34 train-alt-neurites@pc-L2-all-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L2/all/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16727,13 +16727,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-all-image-tmd-rd-decision-tree-stratified-k-fold - md5: ef2a201aea3795bb29ca1a035bfad149.dir - size: 44103676 - nfiles: 13 + md5: 1b806c7f6bb18bf32f4546fad267de0f.dir + size: 121196293 + nfiles: 34 train-alt-neurites@pc-L4-all-image-tmd-rd-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/all/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16767,13 +16767,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L4-axon-image-deepwalk-xgb-stratified-k-fold - md5: 67604891714c41cb882474f1e19a3cf1.dir - size: 37294630 - nfiles: 13 + md5: 3dfc31934e5c3afb7904b20157f23e3d.dir + size: 102632008 + nfiles: 34 train-alt-neurites@pc-L6-basal-image-tmd-proj-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L6/basal/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16847,13 +16847,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L3-all-image-tmd-rd-xgb-stratified-k-fold - md5: 9fb8b3cb009c4c97dc6f8440433a0ccc.dir - size: 20525846 - nfiles: 13 + md5: 0107e08d8834c4f9ff91f9b984406490.dir + size: 56451846 + nfiles: 34 train-alt-neurites@in-L5-all-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/all/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -16967,13 +16967,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L23-basal-image-tmd-rd-decision-tree-stratified-k-fold - md5: e7317da0028f1681e1cfa8ea04fb6a1d.dir - size: 57931557 - nfiles: 13 + md5: 053300f3481ba5fe6657962e53d0df03.dir + size: 159232726 + nfiles: 34 train-alt-neurites@pc-L4-all-image-deepwalk-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/pc-L4/all/image-deepwalk --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -17047,13 +17047,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L5-basal-image-deepwalk-cnn-stratified-k-fold - md5: 611c116775532a48dab67f9d6dfb3dfc.dir - size: 8265829 - nfiles: 13 + md5: b8a79f54c28391880d41f2637ecfd9ff.dir + size: 22672887 + nfiles: 34 train-alt-neurites@in-L1-all-diagram-tmd-rd-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/all/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -17067,13 +17067,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-all-diagram-tmd-rd-perslay-stratified-k-fold - md5: a85ad710502366b9b35908fe292b298a.dir - size: 3506226 - nfiles: 13 + md5: e0dacc09bb01d504a1bbbde5076adcc4.dir + size: 9553598 + nfiles: 34 train-alt-neurites@in-L4-basal-image-deepwalk-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/basal/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -17187,13 +17187,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L5-all-image-tmd-rd-xgb-stratified-k-fold - md5: 68082f4fc6debea961e209d77ba4cbff.dir - size: 46869210 - nfiles: 13 + md5: 9f4b4e994588140f8fec7c340f96c020.dir + size: 128954863 + nfiles: 34 train-alt-neurites@in-L1-all-diagram-deepwalk-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/all/diagram-deepwalk --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -17227,13 +17227,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/pc-L6-axon-image-tmd-proj-cnn-stratified-k-fold - 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path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-cnn-deepwalk-stratified-k-fold - md5: 7244f63e5016d759f264f7a5cce66260.dir - size: 16301368 - nfiles: 13 + md5: 03d35d1aae8d9a2b5a99267fe2bc927d.dir + size: 44662631 + nfiles: 34 train-lida-in-merged-bc-merged-basal@cnn-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/basal/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -17607,13 +17607,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-gnn-morphology-stratified-k-fold - md5: 26c9168a9a1181541eba1daaa1854854.dir - size: 12238989 - nfiles: 13 + md5: fabba90f195b455914907e46c5f5e89e.dir + size: 33531849 + nfiles: 34 train-lida-in-merged-bc-merged-all@cnn-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/all/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -18027,13 +18027,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/janelia-L5-axon-cnn-deepwalk-stratified-k-fold - md5: 69f2bbae8a8e6b298691e1696908f042.dir - size: 5172734 - nfiles: 13 + md5: c131d1d06e695f4e11a13fc020409701.dir + size: 14190790 + nfiles: 34 train-janelia-L5-axon@perslay-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-janelia-L5/axon/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -18127,13 +18127,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/janelia-L5-all-cnn-tmd-stratified-k-fold - md5: 67cfff6ec7a9543426e58822af34a0b2.dir - size: 5164302 - nfiles: 13 + md5: 02c329607c0dbb2ddebe56eb4f9de82d.dir + size: 14192206 + nfiles: 34 train-janelia-L5-basal@cnn-deepwalk: cmd: morphoclass -v train --features-dir extract-features/lida-janelia-L5/basal/image-deepwalk --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -18527,13 +18527,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-basal-decision-tree-deepwalk-stratified-k-fold - md5: 7b7c0554475cf2203835058dca9bae7e.dir - size: 167584313 - nfiles: 13 + md5: 58f927b5c6975f3993c671c915de6325.dir + size: 460688014 + nfiles: 34 train-lida-in-merged-basal@cnn-tmd: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged/basal/image-tmd-rd --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -19921,13 +19921,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L23-axon-diagram-tmd-proj-perslay-stratified-k-fold - md5: dcd66a50e8170da82fc6ec8b29301872.dir - size: 3612682 - nfiles: 13 + md5: 64bca1f079447f3e78b5178446d03220.dir + size: 9829719 + nfiles: 34 train@in-L23-axon-graph-proj-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/axon/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20061,13 +20061,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L4-axon-image-tmd-proj-cnn-stratified-k-fold - md5: 1823240d9dd7b9822893b55903dcf1f5.dir - size: 7006454 - nfiles: 13 + md5: 07d532b5d94c5a89e7d06dc69897aab2.dir + size: 19179257 + nfiles: 34 train@in-L4-axon-image-tmd-proj-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/axon/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20281,13 +20281,13 @@ stages: md5: 6f5a6b3644eb40aa784dc99de39be6cc size: 161 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints/in-L6-axon-image-tmd-proj-decision-tree-stratified-k-fold - md5: 6a671c4034912b04d0461fbb070471a0.dir - size: 25972173 - nfiles: 13 + md5: b6ea6c80ede0ded8e7bf312f79817e95.dir + size: 71377257 + nfiles: 34 train@in-L6-axon-image-tmd-proj-xgb-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/axon/image-tmd-proj --model-config training/configs/model-xgb.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20521,13 +20521,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L5-basal-diagram-deepwalk-perslay-stratified-k-fold - md5: f67e4ce80c96e1a28e63672cfb72a487.dir - size: 3539257 - nfiles: 13 + md5: db1637ffb52b2cff0f7535cdd6f7e6d4.dir + size: 9620172 + nfiles: 34 train-alt-neurites@in-L5-basal-diagram-tmd-rd-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L5/basal/diagram-tmd-rd --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20901,13 +20901,13 @@ stages: md5: cd51ae94c08b5c16a23b38b57cf19aa9 size: 191 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-basal-diagram-tmd-proj-perslay-stratified-k-fold - md5: 201a6be45998d8f9ae202b6263c7c212.dir - size: 3506472 - nfiles: 13 + md5: 8434b032177b7e000dd3ae8ce9b02ce7.dir + size: 9553538 + nfiles: 34 train-alt-neurites@in-L1-basal-graph-proj-gnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/basal/graph-proj --model-config training/configs/model-gnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -20921,13 +20921,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L1-basal-graph-proj-gnn-stratified-k-fold - md5: 84326a56c5da0248e22780f95ee18c99.dir - size: 9536268 - nfiles: 13 + md5: 0b6fa3dc12bbd24467567902786a5452.dir + size: 26160779 + nfiles: 34 train-alt-neurites@in-L1-basal-image-tmd-proj-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L1/basal/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21021,13 +21021,13 @@ stages: md5: 6bae758d5d29c2ee80bfc1ae81efb211 size: 266 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L23-all-graph-proj-gnn-stratified-k-fold - md5: 8a992a88ad38fddc7a4e67eef8fb19c5.dir - size: 10018691 - nfiles: 13 + md5: b5ece090cba43ea255cb495701bf563a.dir + size: 27472260 + nfiles: 34 train-alt-neurites@in-L23-all-image-tmd-proj-cnn-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/all/image-tmd-proj --model-config training/configs/model-cnn.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21141,13 +21141,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L23-basal-image-tmd-proj-cnn-stratified-k-fold - md5: a7e0a9031b26b5146c5c327abcc9e6d1.dir - size: 8335478 - nfiles: 13 + md5: 3a7c137630aa5ab664f9f055a15d621c.dir + size: 22806421 + nfiles: 34 train-alt-neurites@in-L23-basal-image-tmd-proj-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L23/basal/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21281,13 +21281,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L4-all-image-tmd-proj-xgb-stratified-k-fold - md5: b1035a9ff43f307f6e97bc6a59fcd165.dir - size: 45651710 - nfiles: 13 + md5: 1c2ad72b0253e226db3e4150d12aebea.dir + size: 125603321 + nfiles: 34 train-alt-neurites@in-L4-basal-diagram-tmd-proj-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L4/basal/diagram-tmd-proj --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21541,13 +21541,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-all-image-tmd-proj-cnn-stratified-k-fold - md5: ec6330d7d686228b3365db8ce3233cda.dir - size: 5335707 - nfiles: 13 + md5: 31950f9158cf0bfb6add5bb86672ba72.dir + size: 14638298 + nfiles: 34 train-alt-neurites@in-L6-all-image-tmd-proj-decision-tree-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/all/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -21581,13 +21581,13 @@ stages: md5: f10b1b21e9e3e7195886182294689fd6 size: 196 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-alt-neurites/in-L6-all-image-tmd-proj-xgb-stratified-k-fold - md5: 40a441c2ad46731d256abddd2cfc11ca.dir - size: 26914973 - nfiles: 13 + md5: eb688915282f64440a444ce4edc9f500.dir + size: 74068451 + nfiles: 34 train-alt-neurites@in-L6-basal-diagram-tmd-proj-perslay-stratified-k-fold: cmd: morphoclass -v train --features-dir extract-features/in-L6/basal/diagram-tmd-proj --model-config training/configs/model-perslay.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -22001,13 +22001,13 @@ stages: md5: c2760db0c4ea7b723b195262ccd96f3e size: 162 - path: training/configs/splitter-stratified-k-fold.yaml - md5: a3ed00f26b1e4c78675bb219a96166e5 - size: 87 + md5: 24bc27f79e2e7c577938ebe601816b35 + size: 88 outs: - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-cnn-tmd-proj-stratified-k-fold - md5: e956f4f79df45bf9faa88a691523bfe6.dir - size: 16296941 - nfiles: 13 + md5: 596dc20a39227daf34b1358004cf8470.dir + size: 44679388 + nfiles: 34 train-lida-in-merged-bc-merged-basal-proj@decision-tree-tmd-proj: cmd: morphoclass -v train --features-dir extract-features/lida-in-merged-bc-merged/basal/image-tmd-proj --model-config training/configs/model-decision-tree.yaml --splitter-config training/configs/splitter-stratified-k-fold.yaml @@ -26868,3 +26868,2795 @@ stages: - path: evaluation/checkpoints-lida/in-merged-bc-merged-perslay-tmd-proj-stratified-k-fold.html md5: 7a9d97990401a30229d1601c388b0875 size: 11594 + evaluate-alt-neurites@in-L23-basal-image-tmd-proj-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-basal-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L23-basal-image-tmd-proj-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-basal-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + md5: 403f3211e13e216de138e0228bc16ebf + size: 13731179 + outs: + - path: evaluation/in-L23-basal-image-tmd-proj-cnn-stratified-k-fold + md5: 4c1a969bb0880820a7850952d1781ddc.dir + size: 9075402 + nfiles: 33 + - path: evaluation/in-L23-basal-image-tmd-proj-cnn-stratified-k-fold.html + md5: b09d8359c4b9f4a91055e0f457429dd6 + size: 13278 + evaluate-alt-neurites@in-L23-basal-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-basal-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L23-basal-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-basal-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: d4caf474b1a2df1070ee20762156d500 + size: 172742063 + outs: + - path: evaluation/in-L23-basal-image-deepwalk-xgb-stratified-k-fold + md5: 8ef984b8bc68fec44b0d6af483ff791c.dir + size: 9070496 + nfiles: 33 + - path: evaluation/in-L23-basal-image-deepwalk-xgb-stratified-k-fold.html + md5: b0d3b091d394b91645ff9217671b8a16 + size: 13270 + evaluate@in-L23-axon-diagram-tmd-proj-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L23-axon-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L23-axon-diagram-tmd-proj-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L23-axon-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + md5: 2dcb47975e6238aaa18ce342203eadee + size: 751357 + outs: + - path: evaluation/in-L23-axon-diagram-tmd-proj-perslay-stratified-k-fold + md5: 4d8e84445b4e4a071cb62fed1cbf1cc7.dir + size: 9078522 + nfiles: 33 + - path: evaluation/in-L23-axon-diagram-tmd-proj-perslay-stratified-k-fold.html + md5: 6bf42c269d81d14a0a77b6af41cc1805 + size: 13352 + evaluate-janelia-L5@cnn-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/janelia-L5-cnn-tmd-stratified-k-fold/checkpoint.chk + evaluation/janelia-L5/cnn-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/janelia-L5-cnn-tmd-stratified-k-fold + md5: ad85c8b910447a1e16d082224e2e6e21.dir + size: 14190108 + nfiles: 34 + outs: + - path: evaluation/janelia-L5/cnn-tmd-stratified-k-fold + md5: 463b1844bb73e918f74cb03b0bdc95b8.dir + size: 8946442 + nfiles: 33 + - path: evaluation/janelia-L5/cnn-tmd-stratified-k-fold.html + md5: e20deffbbe1640f6f202501a5500e61c + size: 10625 + evaluate-alt-neurites@pc-L2-axon-graph-proj-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-axon-graph-proj-gnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-axon-graph-proj-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-axon-graph-proj-gnn-stratified-k-fold/checkpoint.chk + md5: ce70738ea87dc3aa4e6fdbc1bb9a30b9 + size: 15615891 + outs: + - path: evaluation/pc-L2-axon-graph-proj-gnn-stratified-k-fold + md5: 9ccbe0f7c9594e9a7970db2ecdf59426.dir + size: 8921637 + nfiles: 33 + - path: evaluation/pc-L2-axon-graph-proj-gnn-stratified-k-fold.html + md5: e49242bae11c6df067e6a10c9c949a18 + size: 10324 + evaluate-lida-in-merged-basal@xgb-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-basal-xgb-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-basal-xgb-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-basal-xgb-tmd-stratified-k-fold/checkpoint.chk + md5: 0e6988f92af998c08f689bea4e347402 + size: 418207023 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-xgb-tmd-stratified-k-fold + md5: 55433894a0184320ca7a8aa6c4f480ac.dir + size: 9016740 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-xgb-tmd-stratified-k-fold.html + md5: 00df5d42e61881bdd1744c7536735a8f + size: 12591 + evaluate-alt-neurites@pc-L2-basal-graph-proj-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-basal-graph-proj-gnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-basal-graph-proj-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-basal-graph-proj-gnn-stratified-k-fold/checkpoint.chk + md5: 8fb071442d8e4657f04848dd0043a0a5 + size: 15662221 + outs: + - path: evaluation/pc-L2-basal-graph-proj-gnn-stratified-k-fold + md5: 3892dc3951605ddb7b3f7d02ee2b287b.dir + size: 8924969 + nfiles: 33 + - path: evaluation/pc-L2-basal-graph-proj-gnn-stratified-k-fold.html + md5: 02c2fb45c248d82f6726f297618d3176 + size: 10337 + evaluate-alt-neurites@in-L1-basal-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-basal-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L1-basal-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-basal-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: 4d14a8011ad173f308298d02099cee75 + size: 117816367 + outs: + - path: evaluation/in-L1-basal-image-deepwalk-xgb-stratified-k-fold + md5: f0e04a47528562ef83c333beb9c55018.dir + size: 8996088 + nfiles: 33 + - path: evaluation/in-L1-basal-image-deepwalk-xgb-stratified-k-fold.html + md5: 5187dfa27694aa97a823ebb8b1b4f82b + size: 12069 + evaluate-alt-neurites@pc-L2-basal-diagram-tmd-proj-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-basal-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-basal-diagram-tmd-proj-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-basal-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + md5: 61d8ffe310776f8753af4f080b274b9e + size: 342064 + outs: + - path: evaluation/pc-L2-basal-diagram-tmd-proj-perslay-stratified-k-fold + md5: 4e85c5697348aed00425d7ba56a00687.dir + size: 8921939 + nfiles: 33 + - path: evaluation/pc-L2-basal-diagram-tmd-proj-perslay-stratified-k-fold.html + md5: c7932ab85f6caa69c49f912bf4c137fa + size: 10396 + evaluate-alt-neurites@pc-L5-basal-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-basal-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-basal-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-basal-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: f562abebca893d6bf80e5c8033cb5b71 + size: 167327855 + outs: + - path: evaluation/pc-L5-basal-image-tmd-rd-xgb-stratified-k-fold + md5: 840cd9d2eeb87f21347be531a174e7fa.dir + size: 8943305 + nfiles: 33 + - path: evaluation/pc-L5-basal-image-tmd-rd-xgb-stratified-k-fold.html + md5: d841c45a908315647fa1408f6d993ef1 + size: 10855 + evaluate@in-L23-axon-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L23-axon-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L23-axon-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L23-axon-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: af8463d4650273d16720fc03b17b9a5c + size: 13730215 + outs: + - path: evaluation/in-L23-axon-image-tmd-rd-cnn-stratified-k-fold + md5: c502e4f18e655dfb975e87850bc30e22.dir + size: 9064718 + nfiles: 33 + - path: evaluation/in-L23-axon-image-tmd-rd-cnn-stratified-k-fold.html + md5: e3c2cf34fb7411ec4c524f0897f7360f + size: 13226 + evaluate-alt-neurites@pc-L3-axon-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-axon-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-axon-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-axon-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: 630e27f55e64d3c5fe97ef23d86e90d1 + size: 15661533 + outs: + - path: evaluation/pc-L3-axon-graph-rd-gnn-stratified-k-fold + md5: f4e3f243b462bc1238105a492c78dfcf.dir + size: 8894544 + nfiles: 33 + - path: evaluation/pc-L3-axon-graph-rd-gnn-stratified-k-fold.html + md5: f4a911d1561a9f2028e0a2ae31f2aa1e + size: 9704 + evaluate@pc-L2-apical-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L2-apical-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-apical-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L2-apical-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: 6099966aa6f6201b1d136aeb880592bc + size: 341995 + outs: + - path: evaluation/pc-L2-apical-diagram-deepwalk-perslay-stratified-k-fold + md5: 89ea1b61110ab9a22e32b5555f368404.dir + size: 8921544 + nfiles: 33 + - path: evaluation/pc-L2-apical-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 2ad751da51a9981b4262d0909fb4d2fd + size: 10396 + evaluate-janelia-L5-all@xgb-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-all-xgb-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-xgb-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-all-xgb-deepwalk-stratified-k-fold/checkpoint.chk + md5: d95f83b9e1857d99892a9f84235e0ba1 + size: 66424431 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-xgb-deepwalk-stratified-k-fold + md5: 857a436e735e5d61152b7f12e337a835.dir + size: 8941276 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-xgb-deepwalk-stratified-k-fold.html + md5: e84bb99671c82384d7dc57bc3541b9ff + size: 10858 + evaluate-alt-neurites@in-L1-all-image-tmd-proj-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-all-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L1-all-image-tmd-proj-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-all-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + md5: a02a25eb91f2866a3e689a2b83f0450e + size: 104835311 + outs: + - path: evaluation/in-L1-all-image-tmd-proj-xgb-stratified-k-fold + md5: 97ce5d42f686e7992afff7456c96b70b.dir + size: 9006808 + nfiles: 33 + - path: evaluation/in-L1-all-image-tmd-proj-xgb-stratified-k-fold.html + md5: 369bae6604e26de1a4455ceefff19617 + size: 12043 + evaluate-lida-in-merged-all@cnn-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-all-cnn-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-all-cnn-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-all-cnn-deepwalk-stratified-k-fold/checkpoint.chk + md5: 9d824191206ba5c013c0ada7bf114a00 + size: 35850542 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-cnn-deepwalk-stratified-k-fold + md5: a00d76359817242ee1d7b0be217b8c59.dir + size: 9010740 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-cnn-deepwalk-stratified-k-fold.html + md5: f1a8da979dbfa138d3163178ffb08d32 + size: 12635 + evaluate@in-L6-axon-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L6-axon-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L6-axon-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L6-axon-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: 980a618fdea33ba43edaf74f3fe83345 + size: 5660078 + outs: + - path: evaluation/in-L6-axon-image-tmd-rd-cnn-stratified-k-fold + md5: 6aaa3e7b841a7376dda94f4d524ad1dd.dir + size: 8978933 + nfiles: 33 + - path: evaluation/in-L6-axon-image-tmd-rd-cnn-stratified-k-fold.html + md5: 1a24c7e19966559e15714ebab3e67715 + size: 11431 + evaluate-alt-neurites@pc-L3-all-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-all-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-all-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-all-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: 62059c08823fba84d1f170efdfb4354c + size: 46379439 + outs: + - path: evaluation/pc-L3-all-image-tmd-rd-decision-tree-stratified-k-fold + md5: f6de2fdecfdb874d9f29879033cc1bd8.dir + size: 8904263 + nfiles: 33 + - path: evaluation/pc-L3-all-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: 722b1c7bb8dae3c1d21135a92afa3dd1 + size: 9692 + evaluate@in-L23-axon-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L23-axon-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L23-axon-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L23-axon-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: fd53f8ba86f3d638eafa7724cc704c78 + size: 170374255 + outs: + - path: evaluation/in-L23-axon-image-deepwalk-xgb-stratified-k-fold + md5: 9c0e95a77677efa7c058461ccb4b93ae.dir + size: 9079095 + nfiles: 33 + - path: evaluation/in-L23-axon-image-deepwalk-xgb-stratified-k-fold.html + md5: 8d792d11fc7d1e8546b3052ba3a539fa + size: 13244 + evaluate-alt-neurites@pc-L6-axon-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-axon-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-axon-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-axon-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: f1faa6807a82fa8c400fd152ec63f744 + size: 125514607 + outs: + - path: evaluation/pc-L6-axon-image-deepwalk-decision-tree-stratified-k-fold + md5: b3eefe04a1f01aff0e05f40e6317e36c.dir + size: 8997047 + nfiles: 33 + - path: evaluation/pc-L6-axon-image-deepwalk-decision-tree-stratified-k-fold.html + md5: d0687c892b96b874c579d32f632d10a5 + size: 12106 + evaluate-janelia-L5-axon@decision-tree-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-axon-decision-tree-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-decision-tree-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-axon-decision-tree-tmd-stratified-k-fold/checkpoint.chk + md5: 0acd978d835ca6d44c4a5fb47a51d74a + size: 60433583 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-decision-tree-tmd-stratified-k-fold + md5: 39c3e08b88a345e77b813e625ca56c11.dir + size: 8943234 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-decision-tree-tmd-stratified-k-fold.html + md5: 3f137050ee282f376c06e26f8f4b897b + size: 10860 + evaluate-lida-in-merged-bc-merged@gnn-morphology: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-bc-merged-gnn-morphology-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-bc-merged-gnn-morphology-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-bc-merged-gnn-morphology-stratified-k-fold/checkpoint.chk + md5: b65cafa3aa56099f89748be7a08f4c7f + size: 24506785 + outs: + - path: evaluation/checkpoints-lida/in-merged-bc-merged-gnn-morphology-stratified-k-fold + md5: 536c76c4ebc5fe6e65e9c30b6640da59.dir + size: 9016478 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-bc-merged-gnn-morphology-stratified-k-fold.html + md5: aacc91f4ddb5de4ba9bf2a41d4e6f56f + size: 11629 + evaluate-janelia-L5-all@xgb-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-all-xgb-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-xgb-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-all-xgb-tmd-stratified-k-fold/checkpoint.chk + md5: fde5a724dc75a4e7f3c51c435d3abcd4 + size: 62612079 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-xgb-tmd-stratified-k-fold + md5: 07cb83a3fcaa19589d061d848754482b.dir + size: 8940463 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-xgb-tmd-stratified-k-fold.html + md5: caa32b3a131cda51f14773b05ad65640 + size: 10796 + evaluate@in-L5-axon-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L5-axon-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L5-axon-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L5-axon-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: b69caea31a812cbefb8c6b3afb4477d1 + size: 121990703 + outs: + - path: evaluation/in-L5-axon-image-deepwalk-xgb-stratified-k-fold + md5: 72bc483c6ecbdefde34c6e0b8ac0f9ba.dir + size: 9017203 + nfiles: 33 + - path: evaluation/in-L5-axon-image-deepwalk-xgb-stratified-k-fold.html + md5: 63cf1b9ae5df189b270a7c8c15bf980c + size: 13231 + evaluate-alt-neurites@in-L1-basal-graph-proj-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-basal-graph-proj-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L1-basal-graph-proj-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-basal-graph-proj-gnn-stratified-k-fold/checkpoint.chk + md5: 9ad19fb33582ab3e7653d1bbd8807e89 + size: 17170317 + outs: + - path: evaluation/in-L1-basal-graph-proj-gnn-stratified-k-fold + md5: 81fca50a9196413c31d7209ba8dc7657.dir + size: 8990622 + nfiles: 33 + - path: evaluation/in-L1-basal-graph-proj-gnn-stratified-k-fold.html + md5: 8a523163ffe0bcebd632567cddd412bc + size: 12119 + evaluate-alt-neurites@in-L5-all-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-all-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L5-all-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-all-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: 6d0f8eecff094a048f6f0d45486446dd + size: 127285231 + outs: + - path: evaluation/in-L5-all-image-deepwalk-xgb-stratified-k-fold + md5: 4ff6582c537d50791733add273b2d8c9.dir + size: 9026442 + nfiles: 33 + - path: evaluation/in-L5-all-image-deepwalk-xgb-stratified-k-fold.html + md5: 387dec94597560e8a676870b94d6cfcf + size: 13231 + evaluate-alt-neurites@pc-L3-all-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-all-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-all-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-all-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: e27a55607f1337720f34391170ff87d7 + size: 49565167 + outs: + - path: evaluation/pc-L3-all-image-deepwalk-xgb-stratified-k-fold + md5: 3c36b553ed6690d43755da7ad357b76e.dir + size: 8899377 + nfiles: 33 + - path: evaluation/pc-L3-all-image-deepwalk-xgb-stratified-k-fold.html + md5: 6fc27e159b1ff6849db73bfdc5f6ec32 + size: 9667 + evaluate-alt-neurites@pc-L4-axon-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-axon-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-axon-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L4-axon-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 51e77c634405e3053ea87c190ef1ce7a + size: 91478447 + outs: + - path: evaluation/pc-L4-axon-image-deepwalk-decision-tree-stratified-k-fold + md5: 366d93c66d473d40ad3ac6e2241a42ab.dir + size: 8929117 + nfiles: 33 + - path: evaluation/pc-L4-axon-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 56ef8062347cb875521e431fbf44e813 + size: 10325 + evaluate-alt-neurites@in-L5-all-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-all-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L5-all-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-all-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: a7c1fabfa88be97e8e7b64218252d42e + size: 593210 + outs: + - path: evaluation/in-L5-all-diagram-tmd-rd-perslay-stratified-k-fold + md5: a148cb9c7da6ebd471f2d31661818d2f.dir + size: 9026942 + nfiles: 33 + - path: evaluation/in-L5-all-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: 9defc7d25ca8261d6f70165b8a741497 + size: 13313 + evaluate-alt-neurites@pc-L3-all-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-all-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-all-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-all-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: d6dcb9452e09b2725d49a1eced098165 + size: 47546863 + outs: + - path: evaluation/pc-L3-all-image-tmd-rd-xgb-stratified-k-fold + md5: a64b41dd917c8012caa2bc1dee34e57d.dir + size: 8905143 + nfiles: 33 + - path: evaluation/pc-L3-all-image-tmd-rd-xgb-stratified-k-fold.html + md5: dedf6068a5d544fefd3e1a113af29747 + size: 9641 + evaluate-alt-neurites@pc-L2-all-image-tmd-proj-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-all-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-all-image-tmd-proj-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-all-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + md5: 8a678342aaf49ca065a90f7284365982 + size: 45158063 + outs: + - path: evaluation/pc-L2-all-image-tmd-proj-xgb-stratified-k-fold + md5: a7305e731941d21aed08f898e3a929af.dir + size: 8923519 + nfiles: 33 + - path: evaluation/pc-L2-all-image-tmd-proj-xgb-stratified-k-fold.html + md5: 6afb743944c2923c8476f3ec1a9a4c1e + size: 10261 + evaluate@in-L6-axon-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L6-axon-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L6-axon-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L6-axon-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: 66c8458a0ebd3891e259f587b26e6332 + size: 5660409 + outs: + - path: evaluation/in-L6-axon-image-deepwalk-cnn-stratified-k-fold + md5: 5d0d7697dc7ad2b52a225665ec1dc898.dir + size: 8960866 + nfiles: 33 + - path: evaluation/in-L6-axon-image-deepwalk-cnn-stratified-k-fold.html + md5: 13ed2b5709c7833b7c7eabdc076c2e4c + size: 11457 + evaluate-alt-neurites@in-L4-basal-graph-proj-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-basal-graph-proj-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L4-basal-graph-proj-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-basal-graph-proj-gnn-stratified-k-fold/checkpoint.chk + md5: d87a9b51def85d7c2e5e920dc769895b + size: 17405192 + outs: + - path: evaluation/in-L4-basal-graph-proj-gnn-stratified-k-fold + md5: 7a97c82b484ee154e359063b49556349.dir + size: 9027458 + nfiles: 33 + - path: evaluation/in-L4-basal-graph-proj-gnn-stratified-k-fold.html + md5: 13650541f2351abf2634e2106f3bee6b + size: 13307 + evaluate-alt-neurites@pc-L3-basal-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-basal-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-basal-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-basal-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: 0e32a9cedef48d4e3b22c00da361f345 + size: 49137967 + outs: + - path: evaluation/pc-L3-basal-image-tmd-rd-decision-tree-stratified-k-fold + md5: a827ea6473f297e871d059cb726c92e1.dir + size: 8910233 + nfiles: 33 + - path: evaluation/pc-L3-basal-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: 4b5eb3afa91e2794c18a006cc641d6ba + size: 9718 + evaluate@in-L5-axon-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L5-axon-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L5-axon-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L5-axon-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: af12d3b11131db241a278cddb338568a + size: 120329711 + outs: + - path: evaluation/in-L5-axon-image-tmd-rd-xgb-stratified-k-fold + md5: 86bcfec2ad0f4ac2d76c362e39b13e50.dir + size: 9022270 + nfiles: 33 + - path: evaluation/in-L5-axon-image-tmd-rd-xgb-stratified-k-fold.html + md5: 0b82025a96a93310d93cbb4a4854a27b + size: 13205 + evaluate-alt-neurites@pc-L6-axon-diagram-tmd-proj-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-axon-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-axon-diagram-tmd-proj-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-axon-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + md5: 5616d98c95d3fbedae7d539287f59896 + size: 644470 + outs: + - path: evaluation/pc-L6-axon-diagram-tmd-proj-perslay-stratified-k-fold + md5: d1c5d9e5c44ab38bbe504c1fc5a7bef6.dir + size: 8991949 + nfiles: 33 + - path: evaluation/pc-L6-axon-diagram-tmd-proj-perslay-stratified-k-fold.html + md5: 14c30e4728a5ff1ef5497a17b94f150b + size: 12164 + evaluate-alt-neurites@pc-L2-axon-image-tmd-proj-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-axon-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-axon-image-tmd-proj-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-axon-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + md5: 370efb0c95fd96594da55e2f2853ff7f + size: 42003887 + outs: + - path: evaluation/pc-L2-axon-image-tmd-proj-decision-tree-stratified-k-fold + md5: dc3a925828d53d4ee7bab338390c901a.dir + size: 8927776 + nfiles: 33 + - path: evaluation/pc-L2-axon-image-tmd-proj-decision-tree-stratified-k-fold.html + md5: f93a6181fade02e8101c5339e398550b + size: 10325 + evaluate-alt-neurites@in-L6-all-image-tmd-proj-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-all-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L6-all-image-tmd-proj-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-all-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + md5: db4669e6d49182eaf27ce2540be63240 + size: 65100911 + outs: + - path: evaluation/in-L6-all-image-tmd-proj-xgb-stratified-k-fold + md5: d87bdb3cf1bc00fff6dce9ebc1094dcd.dir + size: 8967700 + nfiles: 33 + - path: evaluation/in-L6-all-image-tmd-proj-xgb-stratified-k-fold.html + md5: c6e04473ce8ab384a415b61608d55bfd + size: 11449 + evaluate-alt-neurites@in-L6-basal-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-basal-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L6-basal-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-basal-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: 6d4c3110afd988aa0f78fcbe6eb357e9 + size: 5660394 + outs: + - path: evaluation/in-L6-basal-image-deepwalk-cnn-stratified-k-fold + md5: 09d4168eadd042df961cc905f7058573.dir + size: 8972688 + nfiles: 33 + - path: evaluation/in-L6-basal-image-deepwalk-cnn-stratified-k-fold.html + md5: d8b0f8ba7409d415bab7631d04bc900e + size: 11483 + evaluate-lida-in-merged-bc-merged-proj@decision-tree-tmd-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-bc-merged-decision-tree-tmd-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-bc-merged-decision-tree-tmd-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-bc-merged-decision-tree-tmd-proj-stratified-k-fold/checkpoint.chk + md5: 9a2b14a6a46bb6836cf7272a568dc187 + size: 404240623 + outs: + - path: evaluation/checkpoints-lida/in-merged-bc-merged-decision-tree-tmd-proj-stratified-k-fold + md5: 0500a36389fefa431c60ed9377f1f9bb.dir + size: 9020128 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-bc-merged-decision-tree-tmd-proj-stratified-k-fold.html + md5: 60fc88eb0ff62b25ac407020f5a22364 + size: 11560 + evaluate-lida-in-merged-bc-merged@xgb-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-bc-merged-xgb-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-bc-merged-xgb-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-bc-merged-xgb-tmd-stratified-k-fold/checkpoint.chk + md5: 1abf2ac27ffde22efa5d1fb0db24d928 + size: 420670319 + outs: + - path: evaluation/checkpoints-lida/in-merged-bc-merged-xgb-tmd-stratified-k-fold + md5: 4b7ad3261e31afef45ea8296a10708b9.dir + size: 9015995 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-bc-merged-xgb-tmd-stratified-k-fold.html + md5: ae22b552f9ccc90273fb479c31d3c855 + size: 11447 + evaluate-alt-neurites@in-L4-basal-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-basal-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L4-basal-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-basal-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: c12318c3c8f3210dd7e8725c707e730b + size: 120925231 + outs: + - path: evaluation/in-L4-basal-image-deepwalk-decision-tree-stratified-k-fold + md5: bda78d94e01cfb5892d7ab7b33d1e976.dir + size: 9026549 + nfiles: 33 + - path: evaluation/in-L4-basal-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 53fbec27bbc46c9cd8f334985f1a514b + size: 13308 + evaluate@pc-L3-apical-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L3-apical-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-apical-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L3-apical-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: 386d0b449b0661173e3c8b969d177f76 + size: 3912554 + outs: + - path: evaluation/pc-L3-apical-image-deepwalk-cnn-stratified-k-fold + md5: 142e59fa1573d5fa001372cccee893bb.dir + size: 8902476 + nfiles: 33 + - path: evaluation/pc-L3-apical-image-deepwalk-cnn-stratified-k-fold.html + md5: 4820f8590435ede89ddc8fe481659e17 + size: 9701 + evaluate-alt-neurites@in-L6-basal-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-basal-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L6-basal-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-basal-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: 3545dccf819cdb3adc7bbfbaa22cdfc6 + size: 16149768 + outs: + - path: evaluation/in-L6-basal-graph-rd-gnn-stratified-k-fold + md5: a7f72d2925fbd7e2848c8dfdbbfb0175.dir + size: 8967925 + nfiles: 33 + - path: evaluation/in-L6-basal-graph-rd-gnn-stratified-k-fold.html + md5: 9fa70e7256457803b8c6865d000d2520 + size: 11499 + evaluate-lida-in-merged-bc-merged-basal@cnn-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-cnn-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-cnn-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-cnn-deepwalk-stratified-k-fold/checkpoint.chk + md5: fd32e1a35573d30f09990e39941a68f2 + size: 35669230 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-cnn-deepwalk-stratified-k-fold + md5: 8100df1a60ba5d227deee6b7bd8c0691.dir + size: 8993561 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-cnn-deepwalk-stratified-k-fold.html + md5: 58def9972869f6eae4691992cf38264c + size: 11603 + evaluate@in-L5-axon-image-tmd-proj-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L5-axon-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L5-axon-image-tmd-proj-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L5-axon-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + md5: 7984335cba8b870052ab36b217f9659a + size: 118215215 + outs: + - path: evaluation/in-L5-axon-image-tmd-proj-xgb-stratified-k-fold + md5: 6a34f08ae35e8fc7562d8e0a7a68bfa8.dir + size: 9025282 + nfiles: 33 + - path: evaluation/in-L5-axon-image-tmd-proj-xgb-stratified-k-fold.html + md5: 30f5a9908b8aea576d4acfe0ddbf4a10 + size: 13231 + evaluate@in-L4-axon-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L4-axon-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L4-axon-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L4-axon-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: 2bdd934428e38112384aa624682f1a51 + size: 17405261 + outs: + - path: evaluation/in-L4-axon-graph-rd-gnn-stratified-k-fold + md5: 783c9ce03f030904526e2f4f2abf5cf8.dir + size: 9026107 + nfiles: 33 + - path: evaluation/in-L4-axon-graph-rd-gnn-stratified-k-fold.html + md5: 87d07ed3cd8b703f979d0d842129bbaa + size: 13255 + evaluate@in-L23-axon-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L23-axon-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L23-axon-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L23-axon-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: ddfd4c154081fac9504108b63057807f + size: 751032 + outs: + - path: evaluation/in-L23-axon-diagram-tmd-rd-perslay-stratified-k-fold + md5: 666c042dd0018fa2251818710af8a98e.dir + size: 9078522 + nfiles: 33 + - path: evaluation/in-L23-axon-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: 380378d6dbb4321bad41708bf70f0d27 + size: 13326 + evaluate-alt-neurites@pc-L6-axon-image-tmd-proj-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-axon-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-axon-image-tmd-proj-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-axon-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + md5: 3bfe0220fbc3044d67ffc6fe6a894135 + size: 130900975 + outs: + - path: evaluation/pc-L6-axon-image-tmd-proj-xgb-stratified-k-fold + md5: c99c261d7acb40be6abe52dc251d7099.dir + size: 9004059 + nfiles: 33 + - path: evaluation/pc-L6-axon-image-tmd-proj-xgb-stratified-k-fold.html + md5: 4279b462a6355ca341a35992f605905f + size: 12056 + evaluate-alt-neurites@in-L6-all-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-all-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L6-all-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-all-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 2c747fbcfa67eaf3d4d8466fdeb32a30 + size: 68381039 + outs: + - path: evaluation/in-L6-all-image-deepwalk-decision-tree-stratified-k-fold + md5: db12f8d41b3c2989cc5c0c045122398f.dir + size: 8972291 + nfiles: 33 + - path: evaluation/in-L6-all-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 1cc24cdc1d1be98a0bff7092f71d1b0b + size: 11500 + evaluate-alt-neurites@pc-L4-axon-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-axon-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-axon-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L4-axon-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: 400dadf96ad0ca309ec9187b8e2691ca + size: 97752687 + outs: + - path: evaluation/pc-L4-axon-image-tmd-rd-xgb-stratified-k-fold + md5: ed57007173d54c53c6a2bc1d5072bcc0.dir + size: 8925008 + nfiles: 33 + - path: evaluation/pc-L4-axon-image-tmd-rd-xgb-stratified-k-fold.html + md5: 30e0663c218339ea18bdf9ab4ef325a1 + size: 10248 + evaluate@pc-L6-apical-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L6-apical-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-apical-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L6-apical-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 0adb4f604bc33ae40b6135f93deaf55d + size: 131992687 + outs: + - path: evaluation/pc-L6-apical-image-deepwalk-decision-tree-stratified-k-fold + md5: b76607195630f96289f3822cd647dbe8.dir + size: 9004566 + nfiles: 33 + - path: evaluation/pc-L6-apical-image-deepwalk-decision-tree-stratified-k-fold.html + md5: bf3bac934e48a36f84a12252b68925c6 + size: 12120 + evaluate-lida-in-merged-bc-merged@cnn-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-bc-merged-cnn-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-bc-merged-cnn-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-bc-merged-cnn-tmd-stratified-k-fold/checkpoint.chk + md5: f38fd3a1eda55b7b373adb7a00f92877 + size: 35668082 + outs: + - path: evaluation/checkpoints-lida/in-merged-bc-merged-cnn-tmd-stratified-k-fold + md5: 92358ce016ee075657d655cd352542ae.dir + size: 9017443 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-bc-merged-cnn-tmd-stratified-k-fold.html + md5: 909c5b55a7d9e00feca8ca9145d322dc + size: 11455 + evaluate-lida-in-merged-bc-merged-proj@cnn-tmd-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-bc-merged-cnn-tmd-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-bc-merged-cnn-tmd-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-bc-merged-cnn-tmd-proj-stratified-k-fold/checkpoint.chk + md5: 6083199e1a8e569efa578fe0e8914781 + size: 35667567 + outs: + - path: evaluation/checkpoints-lida/in-merged-bc-merged-cnn-tmd-proj-stratified-k-fold + md5: d621cbc79776ad60ae88d2bfa78b3215.dir + size: 8991009 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-bc-merged-cnn-tmd-proj-stratified-k-fold.html + md5: f0626fc89e396f517b67225e134a5058 + size: 11517 + evaluate-janelia-L5-axon@xgb-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-axon-xgb-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-xgb-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-axon-xgb-deepwalk-stratified-k-fold/checkpoint.chk + md5: 531f528b6222995fd0e679731985d254 + size: 63544815 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-xgb-deepwalk-stratified-k-fold + md5: 7cb0ff132f38a2d17c5f10196174b8c7.dir + size: 8939392 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-xgb-deepwalk-stratified-k-fold.html + md5: b1e9bddab2131d864a57cc048e579aee + size: 10871 + evaluate-alt-neurites@in-L1-all-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-all-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L1-all-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-all-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: 4bfbd865d7b816c9df42f4ea135fd781 + size: 17170252 + outs: + - path: evaluation/in-L1-all-graph-rd-gnn-stratified-k-fold + md5: dc8311cfadb220526da0f06566babf21.dir + size: 9002347 + nfiles: 33 + - path: evaluation/in-L1-all-graph-rd-gnn-stratified-k-fold.html + md5: ae8c54918ab5a7c223d37c6e6715145e + size: 12067 + evaluate-alt-neurites@pc-L6-all-image-tmd-proj-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-all-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-all-image-tmd-proj-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-all-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + md5: f592af28b31da11322deab74e4982b7b + size: 11314798 + outs: + - path: evaluation/pc-L6-all-image-tmd-proj-cnn-stratified-k-fold + md5: b5295c120c89004b355256d74710f4aa.dir + size: 8988196 + nfiles: 33 + - path: evaluation/pc-L6-all-image-tmd-proj-cnn-stratified-k-fold.html + md5: 9a87a08f3f7501287b4dc3bd0445af5d + size: 12051 + evaluate-alt-neurites@in-L23-all-graph-proj-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-all-graph-proj-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L23-all-graph-proj-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-all-graph-proj-gnn-stratified-k-fold/checkpoint.chk + md5: 1f73c069c2587c7564590709b863f899 + size: 18402445 + outs: + - path: evaluation/in-L23-all-graph-proj-gnn-stratified-k-fold + md5: 8fb1283766dffdadef56910682123cf5.dir + size: 9069975 + nfiles: 33 + - path: evaluation/in-L23-all-graph-proj-gnn-stratified-k-fold.html + md5: 34f46aaeaab7865c657a414c1a23bbe9 + size: 13294 + evaluate-alt-neurites@pc-L4-axon-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-axon-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-axon-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L4-axon-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: a5be2acf2db7e4b0174446aa20dc5d77 + size: 93716719 + outs: + - path: evaluation/pc-L4-axon-image-deepwalk-xgb-stratified-k-fold + md5: ceeb1b1011eacf000184d14ffd0368b6.dir + size: 8915449 + nfiles: 33 + - path: evaluation/pc-L4-axon-image-deepwalk-xgb-stratified-k-fold.html + md5: b3957508d6e84f34e71a1f47ea564e3a + size: 10274 + evaluate@pc-L5-apical-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L5-apical-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-apical-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L5-apical-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: 138e728f84fcc0250cd7a20cd62925f5 + size: 18392657 + outs: + - path: evaluation/pc-L5-apical-graph-rd-gnn-stratified-k-fold + md5: 0aaf022103bf0c2a9fa9198d1bd2195e.dir + size: 8953019 + nfiles: 33 + - path: evaluation/pc-L5-apical-graph-rd-gnn-stratified-k-fold.html + md5: fab603bcf4f0cdac9a65d00054c4b300 + size: 10905 + evaluate-alt-neurites@pc-L5-basal-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-basal-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-basal-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-basal-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 1b335294d169aacc9a453daf1197839b + size: 174062703 + outs: + - path: evaluation/pc-L5-basal-image-deepwalk-decision-tree-stratified-k-fold + md5: b55ef6ebf5a8dae0ab5ba737ed263b53.dir + size: 8957512 + nfiles: 33 + - path: evaluation/pc-L5-basal-image-deepwalk-decision-tree-stratified-k-fold.html + md5: ab99497af82e0b4879b8b298d51eb010 + size: 10932 + evaluate-alt-neurites@in-L1-all-diagram-tmd-proj-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-all-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L1-all-diagram-tmd-proj-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-all-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + md5: e3b00027ed92583925bfc798c9deecbd + size: 564722 + outs: + - path: evaluation/in-L1-all-diagram-tmd-proj-perslay-stratified-k-fold + md5: 53f9f0781ccd19da2cd10c73453b51d6.dir + size: 8988904 + nfiles: 33 + - path: evaluation/in-L1-all-diagram-tmd-proj-perslay-stratified-k-fold.html + md5: 9c75cb1faaee12fa39fd0eedb14835f4 + size: 12151 + evaluate-alt-neurites@pc-L6-axon-image-tmd-proj-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-axon-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-axon-image-tmd-proj-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-axon-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + md5: 3c121083c49e75fbc455fa288cec1785 + size: 126363247 + outs: + - path: evaluation/pc-L6-axon-image-tmd-proj-decision-tree-stratified-k-fold + md5: 1f60e917b6c0c5cc7c26d78994456862.dir + size: 9002072 + nfiles: 33 + - path: evaluation/pc-L6-axon-image-tmd-proj-decision-tree-stratified-k-fold.html + md5: 154801d4314e029e41b628c0cd2605db + size: 12107 + evaluate-alt-neurites@pc-L6-basal-image-tmd-proj-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-basal-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-basal-image-tmd-proj-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-basal-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + md5: 0316e93500c08cf478b367bcd73de414 + size: 128111919 + outs: + - path: evaluation/pc-L6-basal-image-tmd-proj-xgb-stratified-k-fold + md5: 4f9b68ef1fe43c3117805f7a49076282.dir + size: 9006321 + nfiles: 33 + - path: evaluation/pc-L6-basal-image-tmd-proj-xgb-stratified-k-fold.html + md5: f938714095646b2094d6890559da549c + size: 12069 + evaluate-alt-neurites@in-L6-basal-diagram-tmd-proj-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-basal-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L6-basal-diagram-tmd-proj-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-basal-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + md5: 9a01eaffc70095c9a95744e555620f82 + size: 413114 + outs: + - path: evaluation/in-L6-basal-diagram-tmd-proj-perslay-stratified-k-fold + md5: f8fcc831416f1a461bd403c83b6c5134.dir + size: 8968835 + nfiles: 33 + - path: evaluation/in-L6-basal-diagram-tmd-proj-perslay-stratified-k-fold.html + md5: e8a0e5589f0a70065fa373b815fae145 + size: 11584 + evaluate-alt-neurites@pc-L6-axon-image-tmd-proj-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-axon-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-axon-image-tmd-proj-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-axon-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + md5: 3e819d0094c4dea4267eebfa5b671632 + size: 10982315 + outs: + - path: evaluation/pc-L6-axon-image-tmd-proj-cnn-stratified-k-fold + md5: 21a6d60001a787c2ca451e024313c43c.dir + size: 8995361 + nfiles: 33 + - path: evaluation/pc-L6-axon-image-tmd-proj-cnn-stratified-k-fold.html + md5: 841c2a100ec197f7ceeac010a3a1b073 + size: 12064 + evaluate-alt-neurites@pc-L6-axon-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-axon-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-axon-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-axon-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: b4c07bb1e3b726b0ddf596cb426e35fc + size: 644410 + outs: + - path: evaluation/pc-L6-axon-diagram-deepwalk-perslay-stratified-k-fold + md5: e3321087e881e7b63bc41b9e9388bd72.dir + size: 8991949 + nfiles: 33 + - 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path: training/checkpoints-alt-neurites/pc-L4-axon-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: 39eee1e20e56d2f99e70dc50fdd26232 + size: 499053 + outs: + - path: evaluation/pc-L4-axon-diagram-tmd-rd-perslay-stratified-k-fold + md5: 437115603bcb408ccc9c55658e6308c4.dir + size: 8925479 + nfiles: 33 + - path: evaluation/pc-L4-axon-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: 66168017eb395a0ac506825560752c6c + size: 10357 + evaluate-lida-in-merged-bc-merged-proj@gnn-morphology-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-bc-merged-gnn-morphology-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-bc-merged-gnn-morphology-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-bc-merged-gnn-morphology-proj-stratified-k-fold/checkpoint.chk + md5: f40958096f0f7b5f0021277d2e92873a + size: 24506634 + outs: + - path: evaluation/checkpoints-lida/in-merged-bc-merged-gnn-morphology-proj-stratified-k-fold + md5: 1366de3512bcd4503ff90d7f1b24b651.dir + size: 9010992 + nfiles: 33 + - 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path: training/checkpoints-alt-neurites/pc-L5-basal-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: 0f422ccf4ad8f3445b4e1fe1fab41650 + size: 746029 + outs: + - path: evaluation/pc-L5-basal-diagram-tmd-rd-perslay-stratified-k-fold + md5: 9ffe3abb1070ad32dcb46ad716e58d92.dir + size: 8936285 + nfiles: 33 + - path: evaluation/pc-L5-basal-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: f7c40769a0c3f86a7a3220e7bd780b18 + size: 10964 + evaluate-alt-neurites@pc-L5-axon-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-axon-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-axon-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-axon-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: 95ec377affa32395cdd72c05dfa854d0 + size: 746165 + outs: + - path: evaluation/pc-L5-axon-diagram-tmd-rd-perslay-stratified-k-fold + md5: fc5f8aec70bbed74deaaa406d5555fac.dir + size: 8936285 + nfiles: 33 + - path: evaluation/pc-L5-axon-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: 2f0d7d775602d73c21dc04296d8047c1 + size: 10951 + evaluate-alt-neurites@in-L4-all-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-all-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L4-all-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-all-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: 460bdc898c2d79a9fa50692abcc45adb + size: 116938863 + outs: + - path: evaluation/in-L4-all-image-tmd-rd-xgb-stratified-k-fold + md5: 55b4d32208235f40c89be66bbe3c2726.dir + size: 9031001 + nfiles: 33 + - path: evaluation/in-L4-all-image-tmd-rd-xgb-stratified-k-fold.html + md5: aad9f2a40a7d2e2c3c1e79d4dae836b4 + size: 13205 + evaluate-alt-neurites@pc-L6-basal-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-basal-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-basal-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-basal-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: c5659ef3172d0664bc6fa0859985c355 + size: 647784 + outs: + - path: evaluation/pc-L6-basal-diagram-deepwalk-perslay-stratified-k-fold + md5: 2737bc7ecf93db0c9d8249c03cd8dc97.dir + size: 8992376 + nfiles: 33 + - path: evaluation/pc-L6-basal-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 6d29ab943e20c348d7dfb9cff6d79b22 + size: 12176 + evaluate-janelia-L5@perslay-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/janelia-L5-perslay-tmd-stratified-k-fold/checkpoint.chk + evaluation/janelia-L5/perslay-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/janelia-L5-perslay-tmd-stratified-k-fold + md5: 50a872c2493ffdc2c129e4dd5d71de2f.dir + size: 9341095 + nfiles: 34 + outs: + - path: evaluation/janelia-L5/perslay-tmd-stratified-k-fold + md5: 90d9a1df557aae4588ed359bd5a2f4f1.dir + size: 8945105 + nfiles: 33 + - path: evaluation/janelia-L5/perslay-tmd-stratified-k-fold.html + md5: 6ee63dae3afb5ddc8dce1cc03fae5d2c + size: 10702 + evaluate-alt-neurites@pc-L6-basal-diagram-tmd-proj-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-basal-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-basal-diagram-tmd-proj-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-basal-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + md5: 13954e9849521abaa320b2574fe76e41 + size: 647795 + outs: + - path: evaluation/pc-L6-basal-diagram-tmd-proj-perslay-stratified-k-fold + md5: 5893831ac4e11da540f82b5d015c7eae.dir + size: 8992376 + nfiles: 33 + - path: evaluation/pc-L6-basal-diagram-tmd-proj-perslay-stratified-k-fold.html + md5: 18350481d21433e5d05fffc11042beb6 + size: 12176 + evaluate-alt-neurites@pc-L3-all-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-all-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-all-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-all-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: 00f572d29c9f1797c31b5dbed5bf297e + size: 342854 + outs: + - path: evaluation/pc-L3-all-diagram-deepwalk-perslay-stratified-k-fold + md5: c784edf4f3d547f93d96069382c798e2.dir + size: 8906061 + nfiles: 33 + - path: evaluation/pc-L3-all-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 95407643ecbc6a601d207fefa3058281 + size: 9776 + evaluate-alt-neurites@pc-L3-axon-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-axon-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-axon-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-axon-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: 8282965314922de64438602192cea75d + size: 342781 + outs: + - path: evaluation/pc-L3-axon-diagram-deepwalk-perslay-stratified-k-fold + md5: 5c1340cd394e6bbddb303246d510e626.dir + size: 8906061 + nfiles: 33 + - path: evaluation/pc-L3-axon-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 9e8a3059ae2fd6ea4497814d6dcb776f + size: 9789 + evaluate@in-L4-axon-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L4-axon-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L4-axon-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L4-axon-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: 5c9cd65cf23dead4ef3c61b334c420a0 + size: 10154091 + outs: + - path: evaluation/in-L4-axon-image-tmd-rd-cnn-stratified-k-fold + md5: 1b68e3bea7286c22069622a5dbe5b62c.dir + size: 9027775 + nfiles: 33 + - path: evaluation/in-L4-axon-image-tmd-rd-cnn-stratified-k-fold.html + md5: d1de2760a12ec45c08c13a49f52bb55a + size: 13213 + evaluate@pc-L3-apical-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L3-apical-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-apical-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L3-apical-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: df8e128c0f43756d4098cdb34dc9acd4 + size: 342645 + outs: + - path: evaluation/pc-L3-apical-diagram-tmd-rd-perslay-stratified-k-fold + md5: 1b3130c27840b2c56a55524300c17f2b.dir + size: 8903113 + nfiles: 33 + - path: evaluation/pc-L3-apical-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: d93aa382701554187b62a26a9ce2e76d + size: 9776 + evaluate-alt-neurites@in-L23-all-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-all-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L23-all-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-all-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: 6c2a26d8508de0557bbb588aa3b220f0 + size: 751154 + outs: + - path: evaluation/in-L23-all-diagram-deepwalk-perslay-stratified-k-fold + md5: 17ba81cafbe42b1f93c8616f60a7a4f5.dir + size: 9078522 + nfiles: 33 + - path: evaluation/in-L23-all-diagram-deepwalk-perslay-stratified-k-fold.html + md5: b066b623a1f8cd44a912ae1901b2d593 + size: 13352 + evaluate-alt-neurites@in-L23-basal-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-basal-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L23-basal-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-basal-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: f579e0197514996802cc329ebdd806e0 + size: 13731240 + outs: + - path: evaluation/in-L23-basal-image-deepwalk-cnn-stratified-k-fold + md5: 9862e3ee1798ca3a1d384503aabbdb4e.dir + size: 9073785 + nfiles: 33 + - path: evaluation/in-L23-basal-image-deepwalk-cnn-stratified-k-fold.html + md5: c681e0f21ba61ce521d97ee273f08c8a + size: 13278 + evaluate-alt-neurites@pc-L6-basal-image-tmd-proj-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-basal-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-basal-image-tmd-proj-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-basal-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + md5: 9918dbeb9db976b081534d023bb98f63 + size: 123511087 + outs: + - path: evaluation/pc-L6-basal-image-tmd-proj-decision-tree-stratified-k-fold + md5: c77ec31e511921aeaad07e7b06aecaf2.dir + size: 9005975 + nfiles: 33 + - path: evaluation/pc-L6-basal-image-tmd-proj-decision-tree-stratified-k-fold.html + md5: e60bebd35553f99e2359f4d93c8990a8 + size: 12120 + evaluate-alt-neurites@in-L5-all-graph-proj-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-all-graph-proj-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L5-all-graph-proj-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-all-graph-proj-gnn-stratified-k-fold/checkpoint.chk + md5: c89fea4290f4acdba3288e302990d249 + size: 17358189 + outs: + - path: evaluation/in-L5-all-graph-proj-gnn-stratified-k-fold + md5: 3f76491a26db606b5a75ca44658fbcf0.dir + size: 9025983 + nfiles: 33 + - path: evaluation/in-L5-all-graph-proj-gnn-stratified-k-fold.html + md5: 82f1b298b4f02cb20eceb72a1386f50d + size: 13281 + evaluate-lida-in-merged-bc-merged-basal@decision-tree-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-decision-tree-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-decision-tree-tmd-stratified-k-fold.html + deps: + - 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path: evaluation/in-L23-basal-diagram-tmd-rd-perslay-stratified-k-fold + md5: f5e0f731c04408b5627e329428bc8ebc.dir + size: 9078522 + nfiles: 33 + - path: evaluation/in-L23-basal-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: b2dec3ecf2299fd8dee2c719c4af48f6 + size: 13352 + evaluate-alt-neurites@in-L5-basal-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-basal-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L5-basal-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-basal-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: 9abeae5caa319816ef0fde6279dc2f3a + size: 17358918 + outs: + - path: evaluation/in-L5-basal-graph-rd-gnn-stratified-k-fold + md5: 9236018e36c9bfe425ba09f8c40265e5.dir + size: 9027384 + nfiles: 33 + - path: evaluation/in-L5-basal-graph-rd-gnn-stratified-k-fold.html + md5: 2c9b1986c32f87c0d693a7fdffd09c3e + size: 13281 + evaluate-alt-neurites@pc-L5-axon-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-axon-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-axon-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-axon-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: ce75d3715ed286a0971ff4c3416c566a + size: 746097 + outs: + - path: evaluation/pc-L5-axon-diagram-deepwalk-perslay-stratified-k-fold + md5: 9885baf308924225e42dba202f4f7814.dir + size: 8936285 + nfiles: 33 + - path: evaluation/pc-L5-axon-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 42774ead2de8bd99802152affef97bf7 + size: 10977 + evaluate-alt-neurites@in-L6-basal-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-basal-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L6-basal-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-basal-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: f03a8fb64fba857c3e8782e6b09ce65e + size: 5660468 + outs: + - path: evaluation/in-L6-basal-image-tmd-rd-cnn-stratified-k-fold + md5: 3bc54563c0f53f8cd608a3dd4169021d.dir + size: 8964177 + nfiles: 33 + - path: evaluation/in-L6-basal-image-tmd-rd-cnn-stratified-k-fold.html + md5: 1d1e8603de8fa9630ab2ab3762660669 + size: 11457 + evaluate-alt-neurites@in-L6-all-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-all-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L6-all-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-all-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: e75e1ac6f65d62b9a48ae7460ef1bc2b + size: 71304431 + outs: + - path: evaluation/in-L6-all-image-deepwalk-xgb-stratified-k-fold + md5: 6417c83f875949d04083da3858386c3f.dir + size: 8973726 + nfiles: 33 + - path: evaluation/in-L6-all-image-deepwalk-xgb-stratified-k-fold.html + md5: b7451c2ee412e73a3843ab5dbcc9b1d2 + size: 11449 + evaluate@pc-L2-apical-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L2-apical-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-apical-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L2-apical-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: 468109c3e87a243f2a9059ebaa0be494 + size: 3913340 + outs: + - path: evaluation/pc-L2-apical-image-deepwalk-cnn-stratified-k-fold + md5: 9beb2735b2e3b254498d1ffedd09ad90.dir + size: 8918288 + nfiles: 33 + - path: evaluation/pc-L2-apical-image-deepwalk-cnn-stratified-k-fold.html + md5: 5876a00752a9499f73eb183eee9b6c35 + size: 10295 + evaluate@in-L23-axon-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L23-axon-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L23-axon-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L23-axon-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: a9e31d5c4dac60fefa2fda5d7f167ea1 + size: 155473903 + outs: + - path: evaluation/in-L23-axon-image-tmd-rd-decision-tree-stratified-k-fold + md5: 4f2e8c19dea6560b942281619e52b940.dir + size: 9075350 + nfiles: 33 + - path: evaluation/in-L23-axon-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: 42ac1f17cf35166affeb5e54c00e68e0 + size: 13269 + evaluate@in-L6-axon-graph-proj-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L6-axon-graph-proj-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L6-axon-graph-proj-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L6-axon-graph-proj-gnn-stratified-k-fold/checkpoint.chk + md5: af100c1fdc764bff39739af8e283b7d8 + size: 16149577 + outs: + - path: evaluation/in-L6-axon-graph-proj-gnn-stratified-k-fold + md5: b091ebc367bcf55102a3de8dade5a8d6.dir + size: 8969580 + nfiles: 33 + - path: evaluation/in-L6-axon-graph-proj-gnn-stratified-k-fold.html + md5: ddfedeb54e84bf3138a1a06889801721 + size: 11499 + evaluate-alt-neurites@pc-L6-all-diagram-tmd-proj-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-all-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-all-diagram-tmd-proj-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-all-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + md5: e25cb2b2a98f56f6569fe4f96131af1b + size: 647742 + outs: + - path: evaluation/pc-L6-all-diagram-tmd-proj-perslay-stratified-k-fold + md5: a25c2540d06a6fa0632a1614807adc8c.dir + size: 8992376 + nfiles: 33 + - path: evaluation/pc-L6-all-diagram-tmd-proj-perslay-stratified-k-fold.html + md5: 894a764bd940832dfa16679c9a6c282f + size: 12150 + evaluate-alt-neurites@in-L6-all-image-tmd-proj-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-all-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L6-all-image-tmd-proj-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-all-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + md5: 7a661d9ed209771b3f28223a0683e3c2 + size: 5660204 + outs: + - path: evaluation/in-L6-all-image-tmd-proj-cnn-stratified-k-fold + md5: 204887ed2b607005e3254d937bec185e.dir + size: 8978254 + nfiles: 33 + - path: evaluation/in-L6-all-image-tmd-proj-cnn-stratified-k-fold.html + md5: 08a144cbb46f7e4569541c23358c09a3 + size: 11457 + evaluate-alt-neurites@in-L1-all-graph-proj-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-all-graph-proj-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L1-all-graph-proj-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-all-graph-proj-gnn-stratified-k-fold/checkpoint.chk + md5: 44d33d54828d32196ab2eaf80cc93ac8 + size: 17170017 + outs: + - path: evaluation/in-L1-all-graph-proj-gnn-stratified-k-fold + md5: b1c4f56b7d7ed85de4683b653d3decc4.dir + size: 9002140 + nfiles: 33 + - path: evaluation/in-L1-all-graph-proj-gnn-stratified-k-fold.html + md5: 12ec212bb0c6683fb0911a89f8ca4a49 + size: 12093 + evaluate@pc-L4-apical-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L4-apical-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-apical-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L4-apical-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: f824c5b19d84b515462e3bf7cb224dcd + size: 90654831 + outs: + - path: evaluation/pc-L4-apical-image-deepwalk-xgb-stratified-k-fold + md5: 6e9fee5a1d53cd648896d1f97262438b.dir + size: 8926900 + nfiles: 33 + - path: evaluation/pc-L4-apical-image-deepwalk-xgb-stratified-k-fold.html + md5: 8ed9a0a34fc26b291e138fbde22b215c + size: 10287 + evaluate-alt-neurites@in-L6-all-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-all-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L6-all-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-all-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: e14fe8f488d4d080a1803a65abb76eb0 + size: 65384303 + outs: + - path: evaluation/in-L6-all-image-tmd-rd-xgb-stratified-k-fold + md5: 93471b71ae0efecb8756492d2d553ba0.dir + size: 8970897 + nfiles: 33 + - path: evaluation/in-L6-all-image-tmd-rd-xgb-stratified-k-fold.html + md5: b94bf6f50d04bc6a704aafa7986e23c4 + size: 11423 + evaluate-alt-neurites@in-L1-all-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-all-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L1-all-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-all-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: 82f167453c8cfa7a6f7a788e8fa05392 + size: 9319466 + outs: + - path: evaluation/in-L1-all-image-deepwalk-cnn-stratified-k-fold + md5: b9a327bddef3b19a46cc7b3b4a3ecbd1.dir + size: 8995812 + nfiles: 33 + - path: evaluation/in-L1-all-image-deepwalk-cnn-stratified-k-fold.html + md5: 1f1124f85fb3ef97247085daa7ad90e4 + size: 12051 + evaluate-lida-in-merged@xgb-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-xgb-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-xgb-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-xgb-tmd-stratified-k-fold/checkpoint.chk + md5: 2ed8674a27ebfb919f975ab3625b6039 + size: 422645999 + outs: + - path: evaluation/checkpoints-lida/in-merged-xgb-tmd-stratified-k-fold + md5: 609b10494b9d6b15295bded0a2487882.dir + size: 9036479 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-xgb-tmd-stratified-k-fold.html + md5: f72430c73bf70bc1ea910f78004ac270 + size: 12505 + evaluate-lida-in-merged-all-proj@decision-tree-tmd-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-all-decision-tree-tmd-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-all-decision-tree-tmd-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-all-decision-tree-tmd-proj-stratified-k-fold/checkpoint.chk + md5: b1dae895c48189e5f5dbaa73f507a1e6 + size: 403625775 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-decision-tree-tmd-proj-stratified-k-fold + md5: 2ce34da89d77e8b10dc94291beea218f.dir + size: 9010533 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-decision-tree-tmd-proj-stratified-k-fold.html + md5: de5cfc4b89f2d3cdaadf82d0d8948d30 + size: 12678 + evaluate@in-L6-axon-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L6-axon-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L6-axon-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L6-axon-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: bf8ba1cac9e0a219794407d4e164c12f + size: 413114 + outs: + - path: evaluation/in-L6-axon-diagram-tmd-rd-perslay-stratified-k-fold + md5: bdce3fd2c7224be7bde8ed31c527d845.dir + size: 8968775 + nfiles: 33 + - path: evaluation/in-L6-axon-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: 0096e840430551e6d7fda7cc5ada8fcf + size: 11532 + evaluate-lida-in-merged-all@gnn-morphology: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-all-gnn-morphology-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-all-gnn-morphology-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-all-gnn-morphology-stratified-k-fold/checkpoint.chk + md5: 4abc350376f6f55ed137283ef31cd010 + size: 24567949 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-gnn-morphology-stratified-k-fold + md5: 705037719b179306e6e823cb1aad2b01.dir + size: 9008048 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-gnn-morphology-stratified-k-fold.html + md5: cc13a8a41f847ea0059f5ce943affa44 + size: 12747 + evaluate-alt-neurites@in-L5-all-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-all-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L5-all-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-all-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: 03802dabe42b02220863bd63ca05c1f6 + size: 119937519 + outs: + - path: evaluation/in-L5-all-image-tmd-rd-xgb-stratified-k-fold + md5: 462e6620d3eb659282f9a6dda1d5a6a9.dir + size: 9017504 + nfiles: 33 + - path: evaluation/in-L5-all-image-tmd-rd-xgb-stratified-k-fold.html + md5: 05ca9e95ab2424cab72579d3815f44e5 + size: 13205 + evaluate@in-L1-axon-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L1-axon-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L1-axon-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L1-axon-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: b4aaf6d296aad7448452a7f8b8ee9478 + size: 9319152 + outs: + - path: evaluation/in-L1-axon-image-tmd-rd-cnn-stratified-k-fold + md5: 37e67cec81a5054dde20b6451b7612ac.dir + size: 8999104 + nfiles: 33 + - path: evaluation/in-L1-axon-image-tmd-rd-cnn-stratified-k-fold.html + md5: 5c2c2fc0c7da4078e46ae9aa184bab40 + size: 12025 + evaluate@pc-L5-apical-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L5-apical-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-apical-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L5-apical-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: 1bf90bbf44d048b12dd6d1fc5f4f070c + size: 179573679 + outs: + - path: evaluation/pc-L5-apical-image-tmd-rd-xgb-stratified-k-fold + md5: 6ee4c1e151c8391fca54789c08ddd3eb.dir + size: 8944259 + nfiles: 33 + - path: evaluation/pc-L5-apical-image-tmd-rd-xgb-stratified-k-fold.html + md5: 4c108d116f7edaa7a392c802be137803 + size: 10855 + evaluate-lida-in-merged-proj@decision-tree-tmd-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-decision-tree-tmd-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-decision-tree-tmd-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-decision-tree-tmd-proj-stratified-k-fold/checkpoint.chk + md5: 3479343bdd43ded0d100652b34b018d3 + size: 404356399 + outs: + - path: evaluation/checkpoints-lida/in-merged-decision-tree-tmd-proj-stratified-k-fold + md5: 28bf150674bcd0de6280d148445e1f5b.dir + size: 9016683 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-decision-tree-tmd-proj-stratified-k-fold.html + md5: 16c4a49790b6040945c1c131279f00a0 + size: 12618 + evaluate-lida-in-merged-bc-merged-all@gnn-morphology: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-gnn-morphology-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-gnn-morphology-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-gnn-morphology-stratified-k-fold/checkpoint.chk + md5: bae5d631b71f727074ef9202b897d148 + size: 24507252 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-gnn-morphology-stratified-k-fold + md5: 3a2d5d51e6c56cd7c08077e7a1edaac3.dir + size: 9024757 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-gnn-morphology-stratified-k-fold.html + md5: 393e69e059d58299adca18abe4407100 + size: 11689 + evaluate-alt-neurites@in-L4-all-graph-proj-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-all-graph-proj-gnn-stratified-k-fold/checkpoint.chk + evaluation/in-L4-all-graph-proj-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-all-graph-proj-gnn-stratified-k-fold/checkpoint.chk + md5: e81e74ddeefd97951a16f9e6242fc93c + size: 17405074 + outs: + - path: evaluation/in-L4-all-graph-proj-gnn-stratified-k-fold + md5: c27d95d64692516b88d8b32e72766441.dir + size: 9027654 + nfiles: 33 + - path: evaluation/in-L4-all-graph-proj-gnn-stratified-k-fold.html + md5: 9632fe643ea2d546ddd7c57f8adaf45f + size: 13281 + evaluate-lida-in-merged-proj@xgb-tmd-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-xgb-tmd-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-xgb-tmd-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-xgb-tmd-proj-stratified-k-fold/checkpoint.chk + md5: 69a0b3fabbf2f8747e1d158779e3bab3 + size: 410716335 + outs: + - path: evaluation/checkpoints-lida/in-merged-xgb-tmd-proj-stratified-k-fold + md5: 06372a146cdcd44885aa0afdb9322c1a.dir + size: 9025773 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-xgb-tmd-proj-stratified-k-fold.html + md5: 9a518e21a7aed79f5f60d15559b097f3 + size: 12567 + evaluate-alt-neurites@pc-L6-basal-graph-proj-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-basal-graph-proj-gnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-basal-graph-proj-gnn-stratified-k-fold.html + deps: + - 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path: training/checkpoints-lida-alt-neurites/janelia-L5-axon-gnn-morphology-stratified-k-fold/checkpoint.chk + md5: e13cd78e6e2b3b9b8891cb54a4abe580 + size: 16033157 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-gnn-morphology-stratified-k-fold + md5: 932c7c71d147f8b3c6caa2e40824c0ff.dir + size: 8941906 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-gnn-morphology-stratified-k-fold.html + md5: ae179b134ec24a7edfce9c73c7d47a67 + size: 10991 + evaluate-lida-in-merged-basal@decision-tree-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-basal-decision-tree-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-basal-decision-tree-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-basal-decision-tree-deepwalk-stratified-k-fold/checkpoint.chk + md5: f7a8a6b997cf7799e6da1dc3e1e7ef9d + size: 451692847 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-decision-tree-deepwalk-stratified-k-fold + md5: 4cc89052d3e39c2153875c9ec9bc4753.dir + size: 8995327 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-decision-tree-deepwalk-stratified-k-fold.html + md5: 9b63a7726ed5443c50d80e15f6879228 + size: 12704 + evaluate-alt-neurites@in-L5-basal-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-basal-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L5-basal-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-basal-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: 49452ac2784239960fad4d91d295a485 + size: 593390 + outs: + - path: evaluation/in-L5-basal-diagram-deepwalk-perslay-stratified-k-fold + md5: e4ed293c200731d9d6d822729b7e9213.dir + size: 9026942 + nfiles: 33 + - path: evaluation/in-L5-basal-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 9036819cb6cc68aa0324b48e1e6f4dcf + size: 13365 + evaluate-alt-neurites@pc-L5-basal-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-basal-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-basal-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-basal-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: 39591eed00b235a3db5ffd6ef23a92b2 + size: 163538223 + outs: + - path: evaluation/pc-L5-basal-image-tmd-rd-decision-tree-stratified-k-fold + md5: ab99d3d78ca568c7c83e315293f4fee4.dir + size: 8948164 + nfiles: 33 + - path: evaluation/pc-L5-basal-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: b677731c532520fb005f725a7c27c689 + size: 10906 + evaluate@in-L4-axon-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L4-axon-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L4-axon-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L4-axon-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: da12771cccc84b2d8f5ee259f4bf9cfb + size: 124487791 + outs: + - path: evaluation/in-L4-axon-image-deepwalk-xgb-stratified-k-fold + md5: 1aaa39b86255d94292100550bd42c63e.dir + size: 9013860 + nfiles: 33 + - path: evaluation/in-L4-axon-image-deepwalk-xgb-stratified-k-fold.html + md5: d06bd54138af79bc896d37fa8a575514 + size: 13231 + evaluate@pc-L3-apical-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L3-apical-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-apical-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L3-apical-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 9bc90cfac1fb0426d2628c183bf84195 + size: 44940399 + outs: + - path: evaluation/pc-L3-apical-image-deepwalk-decision-tree-stratified-k-fold + md5: 3e10f880e1ed3b4d0c981903a81bae87.dir + size: 8906629 + nfiles: 33 + - path: evaluation/pc-L3-apical-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 2c994bcd7b4cc8b6299b3d9be1d6e4c9 + size: 9744 + evaluate-lida-in-merged-bc-merged-basal-proj@cnn-tmd-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-cnn-tmd-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-cnn-tmd-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-cnn-tmd-proj-stratified-k-fold/checkpoint.chk + md5: 97041f86ab3ff74ecc8b171c686b98fc + size: 35669174 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-cnn-tmd-proj-stratified-k-fold + md5: 7b4d768e3f09fee7fdb61ea9d3bd9fc0.dir + size: 9010374 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-cnn-tmd-proj-stratified-k-fold.html + md5: 680300d9e75234fc08948b956e06c876 + size: 11603 + evaluate-lida-in-merged-basal-proj@xgb-tmd-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-basal-xgb-tmd-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-basal-xgb-tmd-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-basal-xgb-tmd-proj-stratified-k-fold/checkpoint.chk + md5: 64087e3b5aa504d56fe214ebe8d2b56c + size: 412878191 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-xgb-tmd-proj-stratified-k-fold + md5: fd8f5cf45a46af553a278ec79ad9321c.dir + size: 9007264 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-xgb-tmd-proj-stratified-k-fold.html + md5: 7255d636127164ebe29ed79abed2e66d + size: 12653 + evaluate-janelia-L5-all@cnn-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-all-cnn-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-cnn-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-all-cnn-tmd-stratified-k-fold/checkpoint.chk + md5: b87b2782ce8f25df3092bee876871328 + size: 5243822 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-cnn-tmd-stratified-k-fold + md5: 1db8ab6cf733c354cf60fc22be9a050e.dir + size: 8948544 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-cnn-tmd-stratified-k-fold.html + md5: 782c5e912fb164b091253260be8433f2 + size: 10804 + evaluate-alt-neurites@in-L23-basal-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-basal-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L23-basal-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-basal-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: d61e7a0edb2357a217b844729270007c + size: 150152879 + outs: + - path: evaluation/in-L23-basal-image-tmd-rd-decision-tree-stratified-k-fold + md5: c95d166d3d3f6adaf1969fd2d3758ee3.dir + size: 9080007 + nfiles: 33 + - path: evaluation/in-L23-basal-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: 4097bab076c357795cae189ff0fc58ae + size: 13295 + evaluate@pc-L4-apical-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L4-apical-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-apical-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L4-apical-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 4fe4355824264f715b73bcbca2dfddca + size: 88380975 + outs: + - path: evaluation/pc-L4-apical-image-deepwalk-decision-tree-stratified-k-fold + md5: 83038385e47d55784036de46faeec4bf.dir + size: 8932767 + nfiles: 33 + - path: evaluation/pc-L4-apical-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 264428deb56f248a313505f993a8c0fe + size: 10338 + evaluate-lida-in-merged-bc-merged-all@cnn-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-cnn-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-cnn-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-cnn-tmd-stratified-k-fold/checkpoint.chk + md5: 23bd05b6258d3780be55aaeed39ac50e + size: 35667881 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-cnn-tmd-stratified-k-fold + md5: fb963c90cb91c8dc2eb753d7c4ed51ef.dir + size: 9024792 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-all-cnn-tmd-stratified-k-fold.html + md5: 9240d6fc461b4e1e877751444f2b8ad7 + size: 11515 + evaluate@in-L5-axon-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L5-axon-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L5-axon-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L5-axon-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: f1111cdf15624fa01c7c9bebfa8bf9a3 + size: 9986733 + outs: + - path: evaluation/in-L5-axon-image-tmd-rd-cnn-stratified-k-fold + md5: 1977a1948f7f0f2d57b14d4f26fa5964.dir + size: 9022980 + nfiles: 33 + - path: evaluation/in-L5-axon-image-tmd-rd-cnn-stratified-k-fold.html + md5: ecc6909e16a4a7e4b40e39bd3d68bb03 + size: 13213 + evaluate-alt-neurites@pc-L5-basal-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-basal-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-basal-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-basal-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: 53d104c47606d72469f3446d833bc241 + size: 13721515 + outs: + - path: evaluation/pc-L5-basal-image-deepwalk-cnn-stratified-k-fold + md5: 2138b90ac3e1355a47b33c8b9bb71715.dir + size: 8951532 + nfiles: 33 + - path: evaluation/pc-L5-basal-image-deepwalk-cnn-stratified-k-fold.html + md5: acf7c22487c77ee660de8144cf895961 + size: 10889 + evaluate-lida-in-merged-basal-proj@perslay-tmd-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-basal-perslay-tmd-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-basal-perslay-tmd-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-basal-perslay-tmd-proj-stratified-k-fold/checkpoint.chk + md5: f38e50fbd9024bc7a93449c825bb343e + size: 1677619 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-perslay-tmd-proj-stratified-k-fold + md5: ed889fcf5e0098c1a0b33daa6f579d8c.dir + size: 9004262 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-basal-perslay-tmd-proj-stratified-k-fold.html + md5: 57613e2efd349b3803e2d7c7f50fb280 + size: 12737 + evaluate-lida-in-merged@perslay-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-perslay-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-perslay-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-perslay-deepwalk-stratified-k-fold/checkpoint.chk + md5: 131de41b3008648b682fc9e8a18c8bc6 + size: 1676777 + outs: + - path: evaluation/checkpoints-lida/in-merged-perslay-deepwalk-stratified-k-fold + md5: a87b850a68eb7856a49fdd7d6ae79975.dir + size: 9004262 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-perslay-deepwalk-stratified-k-fold.html + md5: 9c0d279c5d62c9a5585d20b59e467aef + size: 12651 + evaluate-alt-neurites@pc-L3-basal-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-basal-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-basal-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-basal-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: 294f090a49aabe19686cb8fdf7d1114a + size: 49755887 + outs: + - path: evaluation/pc-L3-basal-image-deepwalk-xgb-stratified-k-fold + md5: 06151e16303232ba9bfe2c1394b5c496.dir + size: 8906045 + nfiles: 33 + - path: evaluation/pc-L3-basal-image-deepwalk-xgb-stratified-k-fold.html + md5: 2b465b54785d3b978c950f69385c3a53 + size: 9693 + evaluate-alt-neurites@in-L23-all-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-all-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L23-all-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-all-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: afeb980763c8ab8e81636aa145a10d54 + size: 13730087 + outs: + - path: evaluation/in-L23-all-image-tmd-rd-cnn-stratified-k-fold + md5: 508711aa20c85adefe02c6b2534ccf7a.dir + size: 9073395 + nfiles: 33 + - path: evaluation/in-L23-all-image-tmd-rd-cnn-stratified-k-fold.html + md5: 37d510fbcc06f3dc80bbe40f9b841c40 + size: 13226 + evaluate-lida-in-merged-proj@cnn-tmd-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-cnn-tmd-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-cnn-tmd-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-cnn-tmd-proj-stratified-k-fold/checkpoint.chk + md5: 54bc89531010896c5a4e22d6ab0d506a + size: 35847338 + outs: + - path: evaluation/checkpoints-lida/in-merged-cnn-tmd-proj-stratified-k-fold + md5: bc79dfee09019f4048c845c46892ac5d.dir + size: 9009842 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-cnn-tmd-proj-stratified-k-fold.html + md5: 10eac1d2ab5ad6ea5a94e0766d6c67a0 + size: 12575 + evaluate@in-L4-axon-image-tmd-proj-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L4-axon-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L4-axon-image-tmd-proj-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L4-axon-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + md5: 0304977ba43bd038c73056d83d24a631 + size: 10154021 + outs: + - path: evaluation/in-L4-axon-image-tmd-proj-cnn-stratified-k-fold + md5: af1089303feffaf69b7a043ee5edb2f8.dir + size: 9025396 + nfiles: 33 + - path: evaluation/in-L4-axon-image-tmd-proj-cnn-stratified-k-fold.html + md5: ffb11a01c81229b8916f3da6068c4a59 + size: 13239 + evaluate-alt-neurites@pc-L4-basal-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-basal-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-basal-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L4-basal-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 92d4691a68582242348518c7e9ccc0bb + size: 96040495 + outs: + - path: evaluation/pc-L4-basal-image-deepwalk-decision-tree-stratified-k-fold + md5: 794593987a380c8894c6cbbca2a3657e.dir + size: 8924975 + nfiles: 33 + - path: evaluation/pc-L4-basal-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 31f0dd0a9aca001b4c63302fa206ce8d + size: 10338 + evaluate@pc-L3-apical-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L3-apical-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-apical-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L3-apical-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: 113334d2b214feb505760321f83ccdbf + size: 49359535 + outs: + - path: evaluation/pc-L3-apical-image-tmd-rd-decision-tree-stratified-k-fold + md5: fedf0033c04fed22ac937a9cf8c1980a.dir + size: 8911184 + nfiles: 33 + - path: evaluation/pc-L3-apical-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: abef9beb75bc5a8c10e98da1e27a3d23 + size: 9718 + evaluate-janelia-L5-basal@xgb-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-basal-xgb-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-xgb-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-basal-xgb-tmd-stratified-k-fold/checkpoint.chk + md5: 18f46b363a7e130512e1c77ca6b5dfb8 + size: 60789551 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-xgb-tmd-stratified-k-fold + md5: 2bfe94a2cb7ae8a43a7fe35dd29a45d8.dir + size: 8950892 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-basal-xgb-tmd-stratified-k-fold.html + md5: 330d12cb5f854ee7b258f38eded290f1 + size: 10822 + evaluate-alt-neurites@pc-L5-axon-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-axon-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-axon-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-axon-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: 1a562a123517c22a82a6b7fd7d39b61c + size: 171250031 + outs: + - path: evaluation/pc-L5-axon-image-tmd-rd-xgb-stratified-k-fold + md5: 5383a788ea4638d2ded74eda5e90f79a.dir + size: 8957901 + nfiles: 33 + - path: evaluation/pc-L5-axon-image-tmd-rd-xgb-stratified-k-fold.html + md5: c0169a9a05a3f48a8059fe88f6d2db03 + size: 10842 + evaluate-alt-neurites@pc-L6-all-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-all-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-all-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-all-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: f57e6e843a382c1f45220fdd25d8f6d4 + size: 647724 + outs: + - path: evaluation/pc-L6-all-diagram-deepwalk-perslay-stratified-k-fold + md5: d9f8f251e04dee2e5b2bdd1601769709.dir + size: 8992376 + nfiles: 33 + - path: evaluation/pc-L6-all-diagram-deepwalk-perslay-stratified-k-fold.html + md5: db77efb043a372b90888c64cd48ba01f + size: 12150 + evaluate-alt-neurites@in-L4-basal-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-basal-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L4-basal-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-basal-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: 97ee839a0b48b5957feec2f4d460a17c + size: 115361711 + outs: + - path: evaluation/in-L4-basal-image-tmd-rd-decision-tree-stratified-k-fold + md5: f15a7940fec0959530c9e39e6580789d.dir + size: 9012649 + nfiles: 33 + - path: evaluation/in-L4-basal-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: 70c0bed85323d888c608368e191d8cb2 + size: 13282 + evaluate-janelia-L5-all@decision-tree-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-all-decision-tree-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-decision-tree-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-all-decision-tree-tmd-stratified-k-fold/checkpoint.chk + md5: 0155a8b535ed477389e910ddc3e77dd8 + size: 60287663 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-decision-tree-tmd-stratified-k-fold + md5: 3d4f1732567e43f61283cb8d7113cf20.dir + size: 8948522 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-all-decision-tree-tmd-stratified-k-fold.html + md5: 1d5449f6c2d6c2c22697754c7e3822a1 + size: 10847 + evaluate-lida-in-merged-all@xgb-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-all-xgb-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-all-xgb-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-all-xgb-deepwalk-stratified-k-fold/checkpoint.chk + md5: 09eaeeb0496a03849aaafb75d55561fd + size: 472911279 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-xgb-deepwalk-stratified-k-fold + md5: f2b91348510cdb90d47ea1637ea5f58f.dir + size: 8994857 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-xgb-deepwalk-stratified-k-fold.html + md5: 16c2c7741e404cff67b9fb5243d0bc63 + size: 12627 + evaluate-alt-neurites@in-L5-all-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-all-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L5-all-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-all-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: cfcbf88f32f7b4ad4ba0726d87b6febb + size: 9987709 + outs: + - path: evaluation/in-L5-all-image-deepwalk-cnn-stratified-k-fold + md5: cf03deff1d24919464630f6923919dc0.dir + size: 9023173 + nfiles: 33 + - path: evaluation/in-L5-all-image-deepwalk-cnn-stratified-k-fold.html + md5: d0c10ea48b0c9c9db4e7b4d9b45a97f0 + size: 13239 + evaluate@pc-L2-apical-image-tmd-proj-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L2-apical-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-apical-image-tmd-proj-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L2-apical-image-tmd-proj-cnn-stratified-k-fold/checkpoint.chk + md5: 07936ba66b1ab05f3f2ea0e04740c905 + size: 3913267 + outs: + - path: evaluation/pc-L2-apical-image-tmd-proj-cnn-stratified-k-fold + md5: 2e0e2c53ab63dbc9b7e4d20e658038eb.dir + size: 8923606 + nfiles: 33 + - path: evaluation/pc-L2-apical-image-tmd-proj-cnn-stratified-k-fold.html + md5: 28977848b530f29bffd8f25bf43b7e56 + size: 10295 + evaluate-alt-neurites@pc-L4-axon-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-axon-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-axon-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L4-axon-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: a77abf98ace46892b69eaf0dd283023d + size: 7735210 + outs: + - path: evaluation/pc-L4-axon-image-deepwalk-cnn-stratified-k-fold + md5: ec42ef6163e793dc9e15f6c6b2b66bea.dir + size: 8919267 + nfiles: 33 + - path: evaluation/pc-L4-axon-image-deepwalk-cnn-stratified-k-fold.html + md5: 482f1dc620dd3aa1d76785205009abbd + size: 10282 + evaluate-alt-neurites@pc-L6-basal-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-basal-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-basal-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-basal-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: 97cd9fd9e0abddbef6c2be9a4b0b4795 + size: 11315183 + outs: + - path: evaluation/pc-L6-basal-image-deepwalk-cnn-stratified-k-fold + md5: f99f5f5a33a7bbf47a0bb64598825ada.dir + size: 8993383 + nfiles: 33 + - path: evaluation/pc-L6-basal-image-deepwalk-cnn-stratified-k-fold.html + md5: 02351ccbf56b536e015e1d24647b57d1 + size: 12077 + evaluate-alt-neurites@pc-L3-all-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-all-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-all-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-all-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: b42b9b3a68053d08c9d6381618360b5c + size: 48474223 + outs: + - path: evaluation/pc-L3-all-image-deepwalk-decision-tree-stratified-k-fold + md5: 3bd0f3c44e09c013580eaf20ac093bba.dir + size: 8905410 + nfiles: 33 + - path: evaluation/pc-L3-all-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 58b1821dc9cd517b61efced28d6e45b5 + size: 9718 + evaluate-janelia-L5-axon@decision-tree-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-axon-decision-tree-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-decision-tree-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-axon-decision-tree-deepwalk-stratified-k-fold/checkpoint.chk + md5: 6ae072cd41004203b8914175057fa231 + size: 60921071 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-decision-tree-deepwalk-stratified-k-fold + md5: f790cde257db4c74b92fa7cfd13d33ff.dir + size: 8945426 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-decision-tree-deepwalk-stratified-k-fold.html + md5: f36c50a2935b75879a359892263c4b43 + size: 10922 + evaluate-alt-neurites@in-L5-all-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-all-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L5-all-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-all-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: 9b0820a805679b3d8c5d991d324b2846 + size: 9986926 + outs: + - path: evaluation/in-L5-all-image-tmd-rd-cnn-stratified-k-fold + md5: b0fafefab62d8b9bb0196cd2df021745.dir + size: 9025668 + nfiles: 33 + - path: evaluation/in-L5-all-image-tmd-rd-cnn-stratified-k-fold.html + md5: f97a0e9761513e9e82637ee7592b7f28 + size: 13213 + evaluate-alt-neurites@in-L23-basal-diagram-tmd-proj-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-basal-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L23-basal-diagram-tmd-proj-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-basal-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + md5: ceaa67fc790efa93e9b0b44e7099f7b0 + size: 751021 + outs: + - path: evaluation/in-L23-basal-diagram-tmd-proj-perslay-stratified-k-fold + md5: 36184c1dd6522cff0216c9e5e0ddadb2.dir + size: 9078522 + nfiles: 33 + - path: evaluation/in-L23-basal-diagram-tmd-proj-perslay-stratified-k-fold.html + md5: 35d5fc32bc4b7471f395ba60711d5d53 + size: 13378 + evaluate@in-L4-axon-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L4-axon-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L4-axon-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L4-axon-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: 8df1c1b99a922542e7f909eb0885f1ff + size: 600246 + outs: + - path: evaluation/in-L4-axon-diagram-deepwalk-perslay-stratified-k-fold + md5: b96f93ef4406b493c894dbc057f96083.dir + size: 9012869 + nfiles: 33 + - path: evaluation/in-L4-axon-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 1c44a5563d7a607e2f44886e8d87b832 + size: 13339 + evaluate-alt-neurites@in-L4-all-image-tmd-proj-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-all-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L4-all-image-tmd-proj-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-all-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + md5: b4d4fdf5d8adab2880bc3cd54c276680 + size: 116582447 + outs: + - path: evaluation/in-L4-all-image-tmd-proj-xgb-stratified-k-fold + md5: af6c1ea0ddeddbe59044b675ad752af2.dir + size: 9021034 + nfiles: 33 + - path: evaluation/in-L4-all-image-tmd-proj-xgb-stratified-k-fold.html + md5: aa5729c9a5d9bc002b3146f70270283e + size: 13231 + evaluate-lida-in-merged@perslay-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-perslay-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-perslay-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-perslay-tmd-stratified-k-fold/checkpoint.chk + md5: cef07ffb0a18e0d6c1cb9d4322d239e3 + size: 1677240 + outs: + - path: evaluation/checkpoints-lida/in-merged-perslay-tmd-stratified-k-fold + md5: 180a5631bb27c3830a14638ae82885cb.dir + size: 9004262 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-perslay-tmd-stratified-k-fold.html + md5: 9a8ee4da937e08fa013b593537995b10 + size: 12589 + evaluate-alt-neurites@pc-L2-axon-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-axon-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-axon-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-axon-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: 884d1303ca1532f81284b6045ef05265 + size: 3746675 + outs: + - path: evaluation/pc-L2-axon-image-deepwalk-cnn-stratified-k-fold + md5: 9caca2e0c188534eb1c6bfa5ed68f715.dir + size: 8923504 + nfiles: 33 + - path: evaluation/pc-L2-axon-image-deepwalk-cnn-stratified-k-fold.html + md5: a3b3e6b2dd2aaea901486dbffb8b3a5a + size: 10282 + evaluate-alt-neurites@in-L1-basal-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-basal-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L1-basal-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-basal-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: 8e7e527c62da91641f8177fc6fd023df + size: 113865711 + outs: + - path: evaluation/in-L1-basal-image-tmd-rd-xgb-stratified-k-fold + md5: 800d990312212381d0b500f6f7c2a3ef.dir + size: 8999906 + nfiles: 33 + - path: evaluation/in-L1-basal-image-tmd-rd-xgb-stratified-k-fold.html + md5: 074b3d2edb27c6aff0fb52a187e20c6a + size: 12043 + evaluate@in-L4-axon-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L4-axon-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L4-axon-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L4-axon-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: 414e163a43339e8830f51e81a6409eaf + size: 112675567 + outs: + - path: evaluation/in-L4-axon-image-tmd-rd-decision-tree-stratified-k-fold + md5: 9c56f43d92f7bf6d6f18c2b29b6f817d.dir + size: 9028680 + nfiles: 33 + - path: evaluation/in-L4-axon-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: 0c969b3de1f46ed7068849d88fe2507e + size: 13256 + evaluate-alt-neurites@pc-L2-axon-image-tmd-proj-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-axon-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-axon-image-tmd-proj-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-axon-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + md5: c150357b13c023339edc425952e3b326 + size: 43716975 + outs: + - path: evaluation/pc-L2-axon-image-tmd-proj-xgb-stratified-k-fold + md5: 4288edde90854481b9f2f5122396390a.dir + size: 8915715 + nfiles: 33 + - path: evaluation/pc-L2-axon-image-tmd-proj-xgb-stratified-k-fold.html + md5: 89cfd8c4d35c6525fff51985b9fc1aee + size: 10274 + evaluate@in-L23-axon-image-tmd-proj-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L23-axon-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L23-axon-image-tmd-proj-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L23-axon-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + md5: 5f5e194b80261479100249ed587900a3 + size: 154720815 + outs: + - path: evaluation/in-L23-axon-image-tmd-proj-decision-tree-stratified-k-fold + md5: d23a2b2d97f06944cd73d70ae92f63a5.dir + size: 9071326 + nfiles: 33 + - path: evaluation/in-L23-axon-image-tmd-proj-decision-tree-stratified-k-fold.html + md5: 99b3871adba7be53cbf4262a512a3ba9 + size: 13295 + evaluate-lida-in-merged-all-proj@xgb-tmd-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-all-xgb-tmd-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-all-xgb-tmd-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-all-xgb-tmd-proj-stratified-k-fold/checkpoint.chk + md5: b64bc9834953f9556e7ed711dbd046c8 + size: 409973679 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-xgb-tmd-proj-stratified-k-fold + md5: aa79b6578ebbabb880102ef4589a0e2a.dir + size: 9020336 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-xgb-tmd-proj-stratified-k-fold.html + md5: 0d01696b0f427348fe08ae4e0afa7040 + size: 12627 + evaluate-alt-neurites@pc-L6-all-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L6-all-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-all-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L6-all-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: 0d87a7694b1aa44c50be755f92108d07 + size: 144587887 + outs: + - path: evaluation/pc-L6-all-image-deepwalk-xgb-stratified-k-fold + md5: 71098bc90553f1d143a89ce00cea6b22.dir + size: 8993286 + nfiles: 33 + - path: evaluation/pc-L6-all-image-deepwalk-xgb-stratified-k-fold.html + md5: 22cb267fc8b0a5f2e5aa8eb08cc71194 + size: 12043 + evaluate-lida-in-merged@gnn-morphology: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-gnn-morphology-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-gnn-morphology-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-gnn-morphology-stratified-k-fold/checkpoint.chk + md5: 740e34aff8fdd20bb6718e8bca8831a9 + size: 24567147 + outs: + - path: evaluation/checkpoints-lida/in-merged-gnn-morphology-stratified-k-fold + md5: 015d98d569953630f84387de672a7290.dir + size: 9022437 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-gnn-morphology-stratified-k-fold.html + md5: ebb5dada1d0a51aed6fd346e1c8c8748 + size: 12687 + evaluate-alt-neurites@in-L23-basal-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-basal-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L23-basal-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-basal-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: 14b8dec525cb35b7c0393a22adc389e6 + size: 751407 + outs: + - path: evaluation/in-L23-basal-diagram-deepwalk-perslay-stratified-k-fold + md5: 864f8587f1ab1b221ac0914af0bf59c7.dir + size: 9078522 + nfiles: 33 + - path: evaluation/in-L23-basal-diagram-deepwalk-perslay-stratified-k-fold.html + md5: cb35e4ea7eaf98c5379d33ee29452fc2 + size: 13378 + evaluate-alt-neurites@in-L6-basal-image-deepwalk-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-basal-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L6-basal-image-deepwalk-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-basal-image-deepwalk-decision-tree-stratified-k-fold/checkpoint.chk + md5: 9581e658d0efdc6cf9e37f0ceae8f3e0 + size: 67177519 + outs: + - path: evaluation/in-L6-basal-image-deepwalk-decision-tree-stratified-k-fold + md5: 67b9201769b0c01cd24823b8d85fa174.dir + size: 8965984 + nfiles: 33 + - path: evaluation/in-L6-basal-image-deepwalk-decision-tree-stratified-k-fold.html + md5: 293ebde8d3ea63ad55de3919b6260fca + size: 11526 + evaluate@in-L6-axon-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L6-axon-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L6-axon-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L6-axon-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: 860a660726171193c3c2d67ca7953b4b + size: 62682863 + outs: + - path: evaluation/in-L6-axon-image-tmd-rd-decision-tree-stratified-k-fold + md5: 32906cdee05246e2a043fa3d456be408.dir + size: 8967471 + nfiles: 33 + - path: evaluation/in-L6-axon-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: 2e72c79bcf5faa691ead70b2a3c3a096 + size: 11474 + evaluate-lida-in-merged-bc-merged@perslay-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida/in-merged-bc-merged-perslay-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida/in-merged-bc-merged-perslay-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida/in-merged-bc-merged-perslay-tmd-stratified-k-fold/checkpoint.chk + md5: 16091eb6f3b2cee7f7c3158154b4090f + size: 1656895 + outs: + - path: evaluation/checkpoints-lida/in-merged-bc-merged-perslay-tmd-stratified-k-fold + md5: afc43ac2bc1d29db1c05de489ac22b1c.dir + size: 8996596 + nfiles: 33 + - path: evaluation/checkpoints-lida/in-merged-bc-merged-perslay-tmd-stratified-k-fold.html + md5: 830b767f38f3bef2620daa2c0bb82c79 + size: 11532 + evaluate-lida-in-merged-bc-merged-basal-proj@perslay-tmd-proj: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-perslay-tmd-proj-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-perslay-tmd-proj-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-perslay-tmd-proj-stratified-k-fold/checkpoint.chk + md5: 46ddc896a9d156d6263330246060078e + size: 1656379 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-perslay-tmd-proj-stratified-k-fold + md5: eef4ecc8f227d009edca0de021a26622.dir + size: 8996596 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-bc-merged-basal-perslay-tmd-proj-stratified-k-fold.html + md5: 7176b392ff18e1f21f8285175bcd943c + size: 11680 + evaluate-alt-neurites@in-L4-all-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-all-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L4-all-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-all-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: a79ec83fbb4382d15acf7382c4aef731 + size: 600496 + outs: + - path: evaluation/in-L4-all-diagram-deepwalk-perslay-stratified-k-fold + md5: def0323207ce36a1a2140a8b8281ce86.dir + size: 9012869 + nfiles: 33 + - path: evaluation/in-L4-all-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 40f2204b3b91e8e071a38b47efb9f5ac + size: 13339 + evaluate-alt-neurites@pc-L5-all-image-tmd-rd-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-all-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-all-image-tmd-rd-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-all-image-tmd-rd-xgb-stratified-k-fold/checkpoint.chk + md5: 8a4fd38d81394dc52d20f847d31ce22f + size: 173987183 + outs: + - path: evaluation/pc-L5-all-image-tmd-rd-xgb-stratified-k-fold + md5: 40cb26a2114372f2afff0c8c5a4288c3.dir + size: 8955675 + nfiles: 33 + - path: evaluation/pc-L5-all-image-tmd-rd-xgb-stratified-k-fold.html + md5: d5977281e46b38853ff9537a3bd3bcec + size: 10829 + evaluate-alt-neurites@pc-L3-all-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-all-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-all-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-all-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: 7a987b1d177fe3acb5cb3c1f9dcad225 + size: 3912685 + outs: + - path: evaluation/pc-L3-all-image-tmd-rd-cnn-stratified-k-fold + md5: 4015200c86f85848466189e170db8d0a.dir + size: 8908036 + nfiles: 33 + - path: evaluation/pc-L3-all-image-tmd-rd-cnn-stratified-k-fold.html + md5: ab468479ff0e75160cbb642dc7e54f3e + size: 9649 + evaluate@pc-L6-apical-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L6-apical-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-apical-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L6-apical-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: 2044210e6910496642d5f6196a1576b8 + size: 647810 + outs: + - path: evaluation/pc-L6-apical-diagram-deepwalk-perslay-stratified-k-fold + md5: 86e5729d545b5048904419c8bc4d6b48.dir + size: 8992376 + nfiles: 33 + - path: evaluation/pc-L6-apical-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 9b20620a7daa0ddffd80b62824a28e2c + size: 12176 + evaluate-alt-neurites@in-L5-all-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-all-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L5-all-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-all-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: dd4e0d56a9b802018321aec7c518295f + size: 115173999 + outs: + - path: evaluation/in-L5-all-image-tmd-rd-decision-tree-stratified-k-fold + md5: 86fae0b813bf4da4cbb5b338eca6d4ee.dir + size: 9014306 + nfiles: 33 + - path: evaluation/in-L5-all-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: a8fdfd77da883450dab7c3296e666631 + size: 13256 + evaluate@in-L6-axon-image-tmd-proj-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L6-axon-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L6-axon-image-tmd-proj-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L6-axon-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + md5: e0ece1bbb77cf0faff57e1db536736bd + size: 62398255 + outs: + - path: evaluation/in-L6-axon-image-tmd-proj-decision-tree-stratified-k-fold + md5: 157fe0d18f4d325805b5b127bf71b53d.dir + size: 8979162 + nfiles: 33 + - path: evaluation/in-L6-axon-image-tmd-proj-decision-tree-stratified-k-fold.html + md5: 8767e7507bddf0e5a7d861a08e0c4ba9 + size: 11500 + evaluate-alt-neurites@pc-L5-axon-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-axon-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-axon-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-axon-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: bbbae59d9265b18a4d5d8fc41a19d564 + size: 18393386 + outs: + - path: evaluation/pc-L5-axon-graph-rd-gnn-stratified-k-fold + md5: 258032ec929754c7e1d659234b3391c8.dir + size: 8948261 + nfiles: 33 + - path: evaluation/pc-L5-axon-graph-rd-gnn-stratified-k-fold.html + md5: e0905d36efc980dc8457fc73a708f248 + size: 10892 + evaluate-alt-neurites@in-L5-all-image-tmd-proj-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L5-all-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L5-all-image-tmd-proj-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L5-all-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + md5: 8f0b71b170f3b95b07dc82305f2eb86d + size: 113321839 + outs: + - path: evaluation/in-L5-all-image-tmd-proj-decision-tree-stratified-k-fold + md5: f3735715104f52c772f70c8360a1dd95.dir + size: 9016459 + nfiles: 33 + - path: evaluation/in-L5-all-image-tmd-proj-decision-tree-stratified-k-fold.html + md5: d9bf102f4e3b8ee5e002c396dbd3e437 + size: 13282 + evaluate@in-L1-axon-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L1-axon-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L1-axon-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L1-axon-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: 3da4bee96cc62dda804a2ec69bc0e693 + size: 564782 + outs: + - path: evaluation/in-L1-axon-diagram-deepwalk-perslay-stratified-k-fold + md5: dab262336a4d03643afac1c8af0cf270.dir + size: 8988904 + nfiles: 33 + - path: evaluation/in-L1-axon-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 66378ca416b13140baa3b65b5cf3f593 + size: 12151 + evaluate-alt-neurites@pc-L2-axon-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-axon-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-axon-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-axon-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: 848d2280bda55df1a52e57142271998c + size: 44179375 + outs: + - path: evaluation/pc-L2-axon-image-deepwalk-xgb-stratified-k-fold + md5: a71e1277c40a61751170bf1a5f33c576.dir + size: 8914384 + nfiles: 33 + - path: evaluation/pc-L2-axon-image-deepwalk-xgb-stratified-k-fold.html + md5: ec1506366f325f56fe93ffdfeddbc8aa + size: 10274 + evaluate-alt-neurites@pc-L5-basal-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-basal-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-basal-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-basal-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: 2b5f96dcce34470b79615495069ae307 + size: 18393740 + outs: + - path: evaluation/pc-L5-basal-graph-rd-gnn-stratified-k-fold + md5: b7366c8e23c394a72e1a81a91270ba24.dir + size: 8958059 + nfiles: 33 + - path: evaluation/pc-L5-basal-graph-rd-gnn-stratified-k-fold.html + md5: 5ed2d17619617687a99f231b26b73422 + size: 10905 + evaluate-janelia-L5-axon@cnn-deepwalk: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/janelia-L5-axon-cnn-deepwalk-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-cnn-deepwalk-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/janelia-L5-axon-cnn-deepwalk-stratified-k-fold/checkpoint.chk + md5: 5711d5a62744c35e6db54da05b375873 + size: 5243886 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-cnn-deepwalk-stratified-k-fold + md5: 8e177f46a83a762958d4a5445ae2ec95.dir + size: 8947064 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/janelia-L5-axon-cnn-deepwalk-stratified-k-fold.html + md5: 5508812200a143ef8c1d12337ca1f01d + size: 10879 + evaluate-alt-neurites@in-L4-all-image-tmd-rd-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-all-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L4-all-image-tmd-rd-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-all-image-tmd-rd-decision-tree-stratified-k-fold/checkpoint.chk + md5: f41fdce64ed997202e0614da1476871a + size: 112177711 + outs: + - path: evaluation/in-L4-all-image-tmd-rd-decision-tree-stratified-k-fold + md5: f906dc35508506fffb0fad17733b68cb.dir + size: 9018742 + nfiles: 33 + - path: evaluation/in-L4-all-image-tmd-rd-decision-tree-stratified-k-fold.html + md5: 63d8ee4e15c91a6337f66e073ac69fab + size: 13256 + evaluate-alt-neurites@in-L6-basal-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L6-basal-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L6-basal-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L6-basal-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: 126b7f71b4c6dff724186b63a366f0c4 + size: 412984 + outs: + - path: evaluation/in-L6-basal-diagram-deepwalk-perslay-stratified-k-fold + md5: a3e8b2efe9b6acf37c5c50e65258739e.dir + size: 8969004 + nfiles: 33 + - path: evaluation/in-L6-basal-diagram-deepwalk-perslay-stratified-k-fold.html + md5: 9dd93ed2d25eae4566d74e041c39ad7c + size: 11584 + evaluate-alt-neurites@pc-L2-basal-image-tmd-proj-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L2-basal-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L2-basal-image-tmd-proj-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L2-basal-image-tmd-proj-xgb-stratified-k-fold/checkpoint.chk + md5: 5e9532410196af7b8a5a18b4d6fb15ac + size: 46260207 + outs: + - path: evaluation/pc-L2-basal-image-tmd-proj-xgb-stratified-k-fold + md5: 6efecd6844383f86500611684d3dd4d0.dir + size: 8919770 + nfiles: 33 + - path: evaluation/pc-L2-basal-image-tmd-proj-xgb-stratified-k-fold.html + md5: 26827f7d7a236fda328e3e29f9b50444 + size: 10287 + evaluate-alt-neurites@in-L4-basal-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L4-basal-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/in-L4-basal-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L4-basal-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: c06fbd8ca4a224267c7997fb53ee49c7 + size: 126137647 + outs: + - path: evaluation/in-L4-basal-image-deepwalk-xgb-stratified-k-fold + md5: 9993a19c47723e02b8a6ebec194e0f06.dir + size: 9023194 + nfiles: 33 + - path: evaluation/in-L4-basal-image-deepwalk-xgb-stratified-k-fold.html + md5: c93d6a0fc948299f81a4377f52c69aa2 + size: 13257 + evaluate-alt-neurites@pc-L3-basal-graph-rd-gnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L3-basal-graph-rd-gnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-basal-graph-rd-gnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L3-basal-graph-rd-gnn-stratified-k-fold/checkpoint.chk + md5: cf806e57941ce15d279c5d5843acd3a1 + size: 15661518 + outs: + - path: evaluation/pc-L3-basal-graph-rd-gnn-stratified-k-fold + md5: 0bb601f20e4ede875a158081200cab31.dir + size: 8904389 + nfiles: 33 + - path: evaluation/pc-L3-basal-graph-rd-gnn-stratified-k-fold.html + md5: f0ace7ac79dc9aa65c9e8069b154eadd + size: 9717 + evaluate@pc-L3-apical-image-deepwalk-xgb-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L3-apical-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + evaluation/pc-L3-apical-image-deepwalk-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L3-apical-image-deepwalk-xgb-stratified-k-fold/checkpoint.chk + md5: 303ebf68bc90f354f8392556157a4d99 + size: 46012591 + outs: + - path: evaluation/pc-L3-apical-image-deepwalk-xgb-stratified-k-fold + md5: 370c2db05ea713699d7cc1de660be2e7.dir + size: 8897594 + nfiles: 33 + - path: evaluation/pc-L3-apical-image-deepwalk-xgb-stratified-k-fold.html + md5: b430b5b8d7835c93ea01f78a48ef0d93 + size: 9693 + evaluate-alt-neurites@in-L1-basal-diagram-tmd-proj-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-basal-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L1-basal-diagram-tmd-proj-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-basal-diagram-tmd-proj-perslay-stratified-k-fold/checkpoint.chk + md5: d755353f58615cab438dd671c864e7cf + size: 564794 + outs: + - path: evaluation/in-L1-basal-diagram-tmd-proj-perslay-stratified-k-fold + md5: 6c8656757a8e55b7027f11051152bc19.dir + size: 8988904 + nfiles: 33 + - path: evaluation/in-L1-basal-diagram-tmd-proj-perslay-stratified-k-fold.html + md5: 11c578a718996e61ed15cdd311d2525f + size: 12177 From f7b9b844dd578a7384144f5a2d9ffbe56be6c8fd Mon Sep 17 00:00:00 2001 From: Emilie Delattre Date: Wed, 16 Nov 2022 12:00:15 +0100 Subject: [PATCH 09/12] Add evaluation of morphometrics --- dvc/dvc.yaml | 14 ++++++++++++++ dvc/params.yaml | 15 +++++++++++++++ 2 files changed, 29 insertions(+) diff --git a/dvc/dvc.yaml b/dvc/dvc.yaml index 562ae8e..6b9fbd3 100644 --- a/dvc/dvc.yaml +++ b/dvc/dvc.yaml @@ -2691,6 +2691,20 @@ stages: - training/checkpoints-morphometrics/${key} desc: "Train M-type classifier with morphometric input features (tabular data)" + evaluate-morphometrics: + foreach: ${evaluate-morphometrics} + do: + cmd: >- + morphoclass -vv evaluate performance + training/checkpoints-morphometrics/${key}/checkpoint.chk + evaluation/checkpoints-morphometrics/${key}.html + deps: + - training/checkpoints-morphometrics/${key}/checkpoint.chk + outs: + - evaluation/checkpoints-morphometrics/${key}.html + - evaluation/checkpoints-morphometrics/${key} + desc: "Evaluate M-type classifier with morphometric input features (tabular data)" + transfer-learning: foreach: ${transfer_learning.models} do: diff --git a/dvc/params.yaml b/dvc/params.yaml index 7ada121..054b746 100644 --- a/dvc/params.yaml +++ b/dvc/params.yaml @@ -1739,3 +1739,18 @@ training-morphometrics: morphometrics-features-dir: ./extract-features-morphometrics/in-merged-bc-merged/all/features.csv model-config: training/configs/model-xgb.yaml splitter-config: training/configs/splitter-stratified-k-fold.yaml + +evaluate-morphometrics: + - in-L1-all-morphometrics-xgb-stratified-k-fold + - in-L23-all-morphometrics-xgb-stratified-k-fold + - in-L4-all-morphometrics-xgb-stratified-k-fold + - in-L5-all-morphometrics-xgb-stratified-k-fold + - in-L6-all-morphometrics-xgb-stratified-k-fold + - janelia-L5-all-morphometrics-xgb-stratified-k-fold + - pc-L2-all-morphometrics-xgb-stratified-k-fold + - pc-L3-all-morphometrics-xgb-stratified-k-fold + - pc-L4-all-morphometrics-xgb-stratified-k-fold + - pc-L5-all-morphometrics-xgb-stratified-k-fold + - pc-L6-all-morphometrics-xgb-stratified-k-fold + - in-merged-all-morphometrics-xgb-stratified-k-fold + - in-merged-bc-merged-all-morphometrics-xgb-stratified-k-fold From 4c392610222fd70e90a5810aa5590329b5adfdb7 Mon Sep 17 00:00:00 2001 From: Emilie Delattre Date: Wed, 16 Nov 2022 12:02:30 +0100 Subject: [PATCH 10/12] Change key for item --- dvc/dvc.yaml | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/dvc/dvc.yaml b/dvc/dvc.yaml index 6b9fbd3..e7d439e 100644 --- a/dvc/dvc.yaml +++ b/dvc/dvc.yaml @@ -2696,13 +2696,13 @@ stages: do: cmd: >- morphoclass -vv evaluate performance - training/checkpoints-morphometrics/${key}/checkpoint.chk - evaluation/checkpoints-morphometrics/${key}.html + training/checkpoints-morphometrics/${item}/checkpoint.chk + evaluation/checkpoints-morphometrics/${item}.html deps: - - training/checkpoints-morphometrics/${key}/checkpoint.chk + - training/checkpoints-morphometrics/${item}/checkpoint.chk outs: - - evaluation/checkpoints-morphometrics/${key}.html - - evaluation/checkpoints-morphometrics/${key} + - evaluation/checkpoints-morphometrics/${item}.html + - evaluation/checkpoints-morphometrics/${item} desc: "Evaluate M-type classifier with morphometric input features (tabular data)" transfer-learning: From 2b01e87aedb16a6dff9339b308c94a1798a4ce60 Mon Sep 17 00:00:00 2001 From: Emilie Delattre Date: Wed, 16 Nov 2022 13:50:12 +0100 Subject: [PATCH 11/12] Change the folder of evaluation morphometrics --- dvc/dvc.yaml | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/dvc/dvc.yaml b/dvc/dvc.yaml index e7d439e..c283b6a 100644 --- a/dvc/dvc.yaml +++ b/dvc/dvc.yaml @@ -2697,12 +2697,12 @@ stages: cmd: >- morphoclass -vv evaluate performance training/checkpoints-morphometrics/${item}/checkpoint.chk - evaluation/checkpoints-morphometrics/${item}.html + evaluation/${item}.html deps: - training/checkpoints-morphometrics/${item}/checkpoint.chk outs: - - evaluation/checkpoints-morphometrics/${item}.html - - evaluation/checkpoints-morphometrics/${item} + - evaluation/${item}.html + - evaluation/${item} desc: "Evaluate M-type classifier with morphometric input features (tabular data)" transfer-learning: From e0f90edfafcbea359f22986a9b2ea37ab2bb7a65 Mon Sep 17 00:00:00 2001 From: Emilie Delattre Date: Thu, 17 Nov 2022 11:29:14 +0100 Subject: [PATCH 12/12] Add new updates --- dvc/dvc.lock | 315 +++++++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 315 insertions(+) diff --git a/dvc/dvc.lock b/dvc/dvc.lock index b805c86..4fa5940 100644 --- a/dvc/dvc.lock +++ b/dvc/dvc.lock @@ -29660,3 +29660,318 @@ stages: - path: evaluation/in-L1-basal-diagram-tmd-proj-perslay-stratified-k-fold.html md5: 11c578a718996e61ed15cdd311d2525f size: 12177 + evaluate-alt-neurites@pc-L5-axon-image-tmd-rd-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L5-axon-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + evaluation/pc-L5-axon-image-tmd-rd-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L5-axon-image-tmd-rd-cnn-stratified-k-fold/checkpoint.chk + md5: 2d53fc69b9d984fc5b13be6240e415b0 + size: 13721450 + outs: + - path: evaluation/pc-L5-axon-image-tmd-rd-cnn-stratified-k-fold + md5: 1cb27a5d5dab23399abd7dde39edd569.dir + size: 8949762 + nfiles: 33 + - path: evaluation/pc-L5-axon-image-tmd-rd-cnn-stratified-k-fold.html + md5: 9f39e4c8cdca50b72b3edbfb1d942441 + size: 10850 + evaluate@in-L23-axon-image-deepwalk-cnn-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/in-L23-axon-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + evaluation/in-L23-axon-image-deepwalk-cnn-stratified-k-fold.html + deps: + - path: training/checkpoints/in-L23-axon-image-deepwalk-cnn-stratified-k-fold/checkpoint.chk + md5: f1616e55439dfa9bd9b9b9cae3975f83 + size: 13731060 + outs: + - path: evaluation/in-L23-axon-image-deepwalk-cnn-stratified-k-fold + md5: ed094eec80bd462cef870ee1c13917cd.dir + size: 9068488 + nfiles: 33 + - path: evaluation/in-L23-axon-image-deepwalk-cnn-stratified-k-fold.html + md5: 95c0079652ff74f6997572b7cf3cffe4 + size: 13252 + evaluate@pc-L6-apical-image-tmd-proj-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints/pc-L6-apical-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/pc-L6-apical-image-tmd-proj-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints/pc-L6-apical-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + md5: 6379d206ecf9483e8fb5ed74e6e62bae + size: 138011759 + outs: + - path: evaluation/pc-L6-apical-image-tmd-proj-decision-tree-stratified-k-fold + md5: 11ff14624df3b5866f7c77f322e5cbb5.dir + size: 8998248 + nfiles: 33 + - path: evaluation/pc-L6-apical-image-tmd-proj-decision-tree-stratified-k-fold.html + md5: 3f9fad30b17351423d29e8f53fe47d0a + size: 12120 + evaluate-alt-neurites@in-L1-all-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L1-all-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/in-L1-all-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L1-all-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: 2c55ce8275b3b46ca3f02aacab258920 + size: 564854 + outs: + - path: evaluation/in-L1-all-diagram-tmd-rd-perslay-stratified-k-fold + md5: 29b86493f089c35f391f7ebff10fc168.dir + size: 8988904 + nfiles: 33 + - path: evaluation/in-L1-all-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: cd9d227dab084f861782c596d4b4b5b7 + size: 12125 + evaluate-alt-neurites@in-L23-basal-image-tmd-proj-decision-tree-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/in-L23-basal-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + evaluation/in-L23-basal-image-tmd-proj-decision-tree-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/in-L23-basal-image-tmd-proj-decision-tree-stratified-k-fold/checkpoint.chk + md5: af7ca788b7bfa0077a51e69074311d04 + size: 153577391 + outs: + - path: evaluation/in-L23-basal-image-tmd-proj-decision-tree-stratified-k-fold + md5: 2535db0b5211d1a112dfdc1ce93a285c.dir + size: 9079636 + nfiles: 33 + - path: evaluation/in-L23-basal-image-tmd-proj-decision-tree-stratified-k-fold.html + md5: 6f11425992db4aec70eeb9454f3ad2ab + size: 13321 + evaluate-alt-neurites@pc-L4-all-diagram-tmd-rd-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-all-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-all-diagram-tmd-rd-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L4-all-diagram-tmd-rd-perslay-stratified-k-fold/checkpoint.chk + md5: d40894ed2401024542cd0e34b9411fb6 + size: 498983 + outs: + - path: evaluation/pc-L4-all-diagram-tmd-rd-perslay-stratified-k-fold + md5: ac3db279b1c84f265620b04722d89d3c.dir + size: 8925479 + nfiles: 33 + - path: evaluation/pc-L4-all-diagram-tmd-rd-perslay-stratified-k-fold.html + md5: 91ee48e8893d002aef3d13f8945fc81d + size: 10344 + evaluate-alt-neurites@pc-L4-axon-diagram-deepwalk-perslay-stratified-k-fold: + cmd: morphoclass -v evaluate performance training/checkpoints-alt-neurites/pc-L4-axon-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + evaluation/pc-L4-axon-diagram-deepwalk-perslay-stratified-k-fold.html + deps: + - path: training/checkpoints-alt-neurites/pc-L4-axon-diagram-deepwalk-perslay-stratified-k-fold/checkpoint.chk + md5: f7dcfc1d0d0df02927976df506c82f34 + size: 499040 + outs: + - path: evaluation/pc-L4-axon-diagram-deepwalk-perslay-stratified-k-fold + md5: c75190bf858d51856a8483e78b37e897.dir + size: 8925479 + nfiles: 33 + - path: evaluation/pc-L4-axon-diagram-deepwalk-perslay-stratified-k-fold.html + md5: f17f410c4333459e63328e74c05dd297 + size: 10383 + evaluate-lida-in-merged-all@cnn-tmd: + cmd: morphoclass -v evaluate performance training/checkpoints-lida-alt-neurites/in-merged-all-cnn-tmd-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-lida-alt-neurites/in-merged-all-cnn-tmd-stratified-k-fold.html + deps: + - path: training/checkpoints-lida-alt-neurites/in-merged-all-cnn-tmd-stratified-k-fold/checkpoint.chk + md5: e68f5e625a88f05d1344b51992fabf35 + size: 35848750 + outs: + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-cnn-tmd-stratified-k-fold + md5: df9c9dc99040456c0e8eab627d513eeb.dir + size: 9006835 + nfiles: 33 + - path: evaluation/checkpoints-lida-alt-neurites/in-merged-all-cnn-tmd-stratified-k-fold.html + md5: d17537b1f48f3eb7c8b619ea4a79878d + size: 12573 + evaluate-morphometrics@pc-L2-all-morphometrics-xgb-stratified-k-fold: + cmd: morphoclass -vv evaluate performance training/checkpoints-morphometrics/pc-L2-all-morphometrics-xgb-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-morphometrics/pc-L2-all-morphometrics-xgb-stratified-k-fold.html + deps: + - path: training/checkpoints-morphometrics/pc-L2-all-morphometrics-xgb-stratified-k-fold/checkpoint.chk + md5: 8389f6574ae949d428041cdef4147375 + size: 1781743 + outs: + - path: evaluation/checkpoints-morphometrics/pc-L2-all-morphometrics-xgb-stratified-k-fold + md5: 69d81a0c4e9359b521715e00c568ffaf.dir + size: 8914223 + nfiles: 33 + - path: evaluation/checkpoints-morphometrics/pc-L2-all-morphometrics-xgb-stratified-k-fold.html + md5: 6d2cf74f343d323b382ec7cae0fafedf + size: 10262 + evaluate-morphometrics@pc-L6-all-morphometrics-xgb-stratified-k-fold: + cmd: morphoclass -vv evaluate performance training/checkpoints-morphometrics/pc-L6-all-morphometrics-xgb-stratified-k-fold/checkpoint.chk + evaluation/checkpoints-morphometrics/pc-L6-all-morphometrics-xgb-stratified-k-fold.html + deps: + - 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