_pkgdown.yml

url: ~
template:
  bootstrap: 5

home:
  title: An R package for QTL mapping in multi parent populations

navbar:
  title: "statgenMPP"
  left:
    - icon: fa-home
      href: index.html
    - text: "Vignettes"
      href: articles/index.html
  right:
    - icon: fa-newspaper-o
      text: "news"
      href: news/index.html
    - icon: fa-file-code-o
      text: "functions"
      href: reference/index.html
    - icon: fa-seedling
      text: "other packages"
      menu:
        - text: "statgenSTA"
          href: https://biometris.github.io/statgenSTA
        - text: "statgenGxE"
          href: https://biometris.github.io/statgenGxE
        - text: "statgenGWAS"
          href: https://biometris.github.io/statgenGWAS
        - text: "statgenQTLxT"
          href: https://biometris.github.io/statgenQTLxT
        - text: "statgenHTP"
          href: https://biometris.github.io/statgenHTP
        - text: "statgenIBD"
          href: https://biometris.github.io/statgenIBD
        - text: "LMMsolver"
          href: https://biometris.github.io/LMMsolver
    - icon: fa-github fa-lg fab
      text: "github"
      href: https://github.com/Biometris/statgenMPP


articles:
  - title: "Vignettes"
    desc: >
      This vignette provides a description of the statgenMPP package including
      some fully worked examples.
    contents:
      - QTLMapping_in_MultiParentPopulations

reference:
- title: IBD calculations
- contents:
  - calcIBDMPP
  - readRABBITMPP
  - createGDataMPP
  - plot.gDataMPP
  - summary.gDataMPP
- title: QTL Mapping
- contents:
  - selQTLMPP
  - summary.QTLMPP
  - print.summary.QTLMPP
  - plot.QTLMPP
  - kinshipIBD
- title: Data
- contents:
  - barleyPheno
  - maizeSQM
  - maizeMQM
  - barleyMQM