From 9012763994b89d93bce8bb1b53bcded46c40cbd4 Mon Sep 17 00:00:00 2001
From: Bart-Jan van Rossum <bart-jan.vanrossum@wur.nl>
Date: Wed, 5 Feb 2025 11:41:51 +0100
Subject: [PATCH] Minor changes

---
 .Rbuildignore                                       |   1 +
 DESCRIPTION                                         |   3 ++-
 .../example_magicreconstruct_ancestry.csv.gz        | Bin
 inst/tinytest/{rabbitJulia => }/example_ped.csv     |   0
 inst/tinytest/test_readRABBIT.R                     |   5 +++--
 5 files changed, 6 insertions(+), 3 deletions(-)
 rename inst/tinytest/{rabbitJulia => }/example_magicreconstruct_ancestry.csv.gz (100%)
 rename inst/tinytest/{rabbitJulia => }/example_ped.csv (100%)

diff --git a/.Rbuildignore b/.Rbuildignore
index 2d137ac..636c83c 100644
--- a/.Rbuildignore
+++ b/.Rbuildignore
@@ -17,3 +17,4 @@ public
 ^CRAN-RELEASE$
 developmentScripts
 pkgdown
+revdep
diff --git a/DESCRIPTION b/DESCRIPTION
index 52c3f10..8f3e144 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -46,7 +46,8 @@ Roxygen: list(markdown = TRUE)
 Suggests: 
     rmarkdown,
     knitr, 
-    tinytest
+    tinytest,
+    R.utils
 VignetteBuilder: knitr
 URL: https://biometris.github.io/statgenIBD/index.html, https://github.com/Biometris/statgenIBD/
 BugReports: https://github.com/Biometris/statgenIBD/issues
diff --git a/inst/tinytest/rabbitJulia/example_magicreconstruct_ancestry.csv.gz b/inst/tinytest/example_magicreconstruct_ancestry.csv.gz
similarity index 100%
rename from inst/tinytest/rabbitJulia/example_magicreconstruct_ancestry.csv.gz
rename to inst/tinytest/example_magicreconstruct_ancestry.csv.gz
diff --git a/inst/tinytest/rabbitJulia/example_ped.csv b/inst/tinytest/example_ped.csv
similarity index 100%
rename from inst/tinytest/rabbitJulia/example_ped.csv
rename to inst/tinytest/example_ped.csv
diff --git a/inst/tinytest/test_readRABBIT.R b/inst/tinytest/test_readRABBIT.R
index 63436fa..0b93c1c 100644
--- a/inst/tinytest/test_readRABBIT.R
+++ b/inst/tinytest/test_readRABBIT.R
@@ -55,10 +55,11 @@ expect_equal(barleyMPP$markers, barleyMPP2$markers)
 
 ## Define input files.
 
-genoFileJulia <- file.path("rabbitJulia", "example_magicreconstruct_ancestry.csv.gz")
-pedFileJulia <- file.path("rabbitJulia", "example_ped.csv")
+genoFileJulia <- file.path(".", "example_magicreconstruct_ancestry.csv.gz")
+pedFileJulia <- file.path(".", "example_ped.csv")
 
 ## Different combinations of inputs should give similar output.
+
 expect_silent(exMPP <- readRABBIT(infile = genoFileJulia))
 expect_silent(exMPP2 <- readRABBIT(infile = genoFileJulia, pedFile = pedFileJulia))