DESCRIPTION

Package: tidysq
Type: Package
Title: Tidy Processing and Analysis of Biological Sequences
Version: 1.2.2
Date: 2024-10-23
Authors@R: c(person("Dominik", "Rafacz", 
           email = "dominikrafacz@gmail.com",
           comment = c(ORCID = "0000-0003-0925-1909"),
           role = c("cre", "aut")),
           person("Michal", "Burdukiewicz", 
           email = "michalburdukiewicz@gmail.com", 
           comment = c(ORCID = "0000-0001-8926-582X"),
           role = c("aut")),
           person("Laura", "Bakala", 
           email = "erdaradun.gaztea@gmail.com",
           role = c("aut")),
           person("Leon Eyrich", "Jessen", 
           email = "ljess@dtu.dk",
           role = c("ctb"),
           comment = c(ORCID = "0000-0003-2879-2559")),
           person("Stefan", "Roediger", 
           email = "stefan.roediger@b-tu.de", 
           comment = c(ORCID = "0000-0002-1441-6512"),
           role = c("ctb")),
           person("Jadwiga", "Slowik", 
           email = "jadwigaslowik5@gmail.com",
           comment = c(ORCID = "0000-0003-3466-8933"),
           role = c("ctb")),
           person("Weronika", "Puchala", 
           email = "puchala.weronika@gmail.com", 
           comment = c(ORCID = "0000-0003-2163-1429"),
           role = c("ctb")),
           person("Katarzyna", "Sidorczuk", 
           email = "sidorczuk.katarzyna17@gmail.com",
           role = c("ctb")),
           person("Filip", "Pietluch", 
           email = "fpietluch@gmail.com",
           role = c("ctb")),
           person("Jaroslaw", "Chilimoniuk", 
           email = "jaroslaw.chilimoniuk@gmail.com", 
           comment = c(ORCID = "0000-0001-5467-018X"),
           role = c("ctb")))
Description: A tidy approach to analysis of biological sequences. All processing and data-storage functions are heavily optimized to allow the fastest and most efficient data storage.
Depends: R (>= 3.0.0)
Imports: 
    checkmate (>= 1.9.0),
    cli (>= 2.0.0),
    crayon (>= 1.3.4),
    dplyr (>= 1.0.2),
    pillar (>= 1.4.2),
    Rcpp (>= 1.0.1),
    tibble (>= 2.1.3),
    vctrs (>= 0.3.0)
Suggests: 
    ape (>= 5.3),
    bioseq (>= 0.1.2),
    Biostrings (>= 2.52.0),
    covr,
    knitr,
    lifecycle,
    purrr,
    seqinr (>= 3.4-5),
    spelling,
    rmarkdown,
    testthat (>= 3.0.0),
    withr (>= 2.2.0),
    rlang,
    mockr
License: GPL (>= 2)
URL: https://github.com/BioGenies/tidysq
BugReports: https://github.com/BioGenies/tidysq/issues
SystemRequirements: GNU make,
                    C++17
NeedsCompilation: no
Repository: CRAN
Encoding: UTF-8
Language: en-US
RoxygenNote: 7.3.2
LinkingTo: Rcpp,
           testthat
VignetteBuilder: knitr
Config/testthat/edition: 3