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The Bowtie manual page seems to have some special characters, probably related to the quote characters: http://bowtie-bio.sourceforge.net/manual.shtml#paired-end-alignment.
As one example, see: "Paired-end alignments where one mate’s alignment is entirely contained within the other’s are considered invalid."
The text was updated successfully, but these errors were encountered:
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The Bowtie manual page seems to have some special characters, probably related to the quote characters: http://bowtie-bio.sourceforge.net/manual.shtml#paired-end-alignment.
As one example, see: "Paired-end alignments where one mate’s alignment is entirely contained within the other’s are considered invalid."
The text was updated successfully, but these errors were encountered: