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CHANGELOG.md

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0.0.14 (unreleased)

  • Nothing changed yet.

0.0.13 (2021-12-28)

  • Add official support for Python 3.10
  • Update testing packages

0.0.12 (2020-11-12)

  • Minor fixes on CI.
  • Add official support for Python 3.9

0.0.11 (2020-03-15)

  • Added py.typed.
  • Unify writing methods.

0.0.10 (2020-02-27)

  • Change step model: now emission and insertion probabilities are dict with char as key and probability as value.

0.0.9 (2020-02-25)

  • Make HMM model class dataclass.
  • Removed unused method from HMM model class.
  • Fix set variable uppercase in workflows.
  • Added benchmark result display in tests.
  • Benchmark package on python 3.6 and 3.7.
  • Show benchmark results in cronjob and release workflows.

0.0.8 (2020-02-22)

  • Fix wheel for Python 3.6.

0.0.7 (2020-02-21)

  • Enable periodic tests for all Pfam hmm profiles.
  • Enable mypy.
  • Enabled isort.
  • Added model for statistical data.
  • Added crosscheck test (load -> save -> load and compare if both loaded model are same).
  • Added full database test (all hmm profiles from Pfam).
  • Fixed read emission line for start step.
  • Added save method with opened file (or file-like object) as parameter.
  • Fixed saving RF line (boolean value was false/true instead of no/yes).
  • Added saving statistical lines
  • Added saving build command
  • Added saving search command
  • Added saving additional data in emission line

0.0.6 (2020-02-20)

  • Add wheel to release.

0.0.5 (2020-02-20)

  • Auto release from github.

0.0.4 (2020-02-20)

  • Set development status to Alpha.

0.0.3 (2020-02-20)

  • CI/CD tests

0.0.2 (2020-02-19)

  • CI/CD tests

0.0.1 (2020-02-19)

Initial release

  • Reader implemented
  • Writer implemented
  • Base models implemented