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Protocols to run OT diagnostic stations

Station A

This protocol replates up to 96 samples from source tubes into a 96-deepwell plate. The samples should be loaded with inactivation buffer when input into this step. Please see the note at the top of the station_a.ot2.apiv2 script for reagent setup.

Station B

This protocol performs RNA extraction from replated samples. The output 96-deepwell plate from station A should be placed on the magnetic module in slot 4 in this protocol.

Reservoir 1 layout (slot 2):
res1

Reservoir 2 layout (slot 5):
res2

Station C

This protocol plates elution output from station B to a new PCR plate, along with up to 3 probes (loaded in separate mastermix tubes).

Transfer scheme if using 4x tuberacks:
tubes transfer scheme

Transfer scheme if using PCR strips:
strips transfer scheme

Mastermix aluminum block map (slot 11):
mastermix map