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Issues list

How to remove the bases length limitation during the annotation?
#49 opened Dec 17, 2024 by hall-wang updated Dec 17, 2024
running programm with reference database for blast searches throws error
#46 opened Jun 18, 2024 by ckeuschn updated Oct 21, 2024
2
Permission denied when moving files
#36 opened Mar 24, 2022 by aidanfoo96 updated Jul 5, 2024
6
No protein sequence for Cyc2
#47 opened Jun 21, 2024 by EvaP29 updated Jun 25, 2024
2
error depth = open("%s/%s.depth" % (outDirectory, cell)) | HELP PLS.
#40 opened Oct 16, 2022 by DrRumble updated Jan 19, 2024
1
About iron-sulfur proteins
#41 opened Nov 2, 2022 by maocheng2020 updated Jan 19, 2024
1
Use of ORFs
#42 opened Dec 15, 2022 by STabuteau updated Jan 19, 2024
2
where was the data for protein DmkA obtained from？
#43 opened Mar 14, 2023 by xdli009 updated Jan 19, 2024
1
'Namespace' object has no attribute 'hbm'
#44 opened Jan 3, 2024 by Sxxnwei updated Jan 19, 2024
1
Error in hclust(d = dist(x = fegenie.scaled))
#34 opened Dec 7, 2021 by manik-123 updated Nov 22, 2022
1
Renamed contigs?
#39 opened Sep 22, 2022 by JBuongio updated Oct 14, 2022
4
geneSummary file
#38 opened Jun 30, 2022 by JBuongio updated Jul 4, 2022
3
Error - ValueError: could not convert string to float: 'EMPTY'
#32 opened Nov 19, 2021 by JBuongio updated Jun 9, 2022
38
Rewrite using a workflow manager (snakemake, nextflow)
#37 opened Apr 23, 2022 by phiweger updated Apr 23, 2022
false negatives?
#35 opened Feb 23, 2022 by metalichen updated Feb 27, 2022
3
DIAMOND Verification: local variable 'idxDict' referenced before assignment
#30 opened Sep 30, 2021 by mwittep updated Feb 19, 2022
5
Heatmap has same values regardless of what inflation factor I use
#33 opened Nov 30, 2021 by patrickmon38 updated Dec 1, 2021
2
How to use -bams for a coassembly of some metagenomes
#10 opened May 19, 2020 by pdalcinmartins updated Nov 18, 2021
4
Why the FeGenie installed by conda and the FeGenie installed manually work very differently？
#31 opened Oct 19, 2021 by xdli009 updated Nov 13, 2021
8
Tagged release and license file
#25 opened Apr 20, 2021 by npavlovikj updated Nov 1, 2021
17
Error "hmmsearch: not found ... local variable 'hmmout' referenced before assignment" while running FeGenie
#29 opened Jun 14, 2021 by anapopov updated Jun 15, 2021
5
Regarding --all_results option
#27 opened Apr 21, 2021 by ShailNair updated Apr 26, 2021
2
relative abundace?
#22 opened Mar 17, 2021 by plant272 updated Mar 17, 2021
1
Error when cluster ORFs
#20 opened Sep 29, 2020 by Rachael-16 updated Sep 30, 2020
1
Where to hmms/iron
#15 opened Jul 31, 2020 by bkemish updated Jul 31, 2020
1
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