README_quarto_conversion.md

Rendering the fennica project in quarto

Execute the script R/scriptConversionQuarto.R in the fennica/inst/examples directory. The script will automatically convert the .Rmd files in quarto, add a chunk code with source("init.R) at beginning of the .qmd files and then render the directory in the _book folder (can be changed in the _quarto.yml file).

To see what the book looks like, use the commande (in the inst/examples) :

quarto::quarto_preview() in a R prompt or use : quarto preview in the shell prompt

Convert a Rmardown file to quarto format

In a R command prompt, use the following command :

knitr::convert_chunk_header("filename.Rmd", output = "filename.qmd")

The output is necessary to create a new file, otherwise the file converted in quarto is only printed.

Rendering a qmd document

With the quarto package loaded, use in a shell prompt :

quarto render filename.qmd

or in a R prompt :

quarto::quarto_render("filename.qmd")

-> The output of this command is set by default to create a html document of the same name.

Renderin a quarto project

In the folder you want to render, use in a shell prompt :

quarto render 

-> all the qmd file in the current folder will be rendered.

In the _quarto.yml file, you can precise what file you want to render and add treatment options.

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Here are two links that can be helpfull : -> converting rmd to quarto for beginner https://laderast.github.io/qmd_rmd/#/title-slide

-> the official quarto documentation site https://quarto.org/docs/guide/