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MSBoost.py
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MSBoost.py
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import numpy as np
import pandas as pd
from collections import Counter
from pandas import DataFrame, concat
from concurrent.futures import ThreadPoolExecutor
# Scikit-learn: Machine Learning in Python, Pedregosa et al., JMLR 12, pp. 2825-2830, 2011
from sklearn.model_selection import train_test_split
from sklearn.preprocessing import RobustScaler, MinMaxScaler
from sklearn.metrics import mean_squared_error, r2_score, f1_score
from sklearn.utils.validation import check_X_y, check_array, check_is_fitted
from sklearn.ensemble import GradientBoostingRegressor, HistGradientBoostingRegressor, BaggingRegressor, ExtraTreesRegressor, RandomForestRegressor
from sklearn.svm import NuSVR, SVC, SVR, LinearSVR
from sklearn.base import BaseEstimator, ClassifierMixin, RegressorMixin
from lightgbm import LGBMRegressor
from sklearn.neural_network import MLPRegressor
from sklearn.linear_model import LinearRegression, BayesianRidge, LassoCV, RidgeCV, LarsCV, OrthogonalMatchingPursuitCV, LassoLarsCV, ElasticNet, ElasticNetCV, SGDRegressor, LassoLars, Lasso, Ridge, ARDRegression, RANSACRegressor, HuberRegressor, TheilSenRegressor, LassoLarsIC
from sklearn.kernel_ridge import KernelRidge
from sklearn.tree import DecisionTreeRegressor
from sklearn.neighbors import KNeighborsRegressor
from xgboost import XGBRegressor
from time import perf_counter
from random import sample
from copy import deepcopy
from scipy.stats import dirichlet
def update_posterior_probabilities(models, prior_probabilities_all, penalty_factor=0.6, num_samples=1_000_000):
# Sort models by 'loss' value
models_sorted = sorted(models, key=lambda x: x['loss'])
# Assign rank based on sorted order
for rank, model in enumerate(models_sorted, start=1):
model['loss'] = rank
# Extract observed errors and model instances
observed_errors = np.array([model['loss'] for model in models_sorted])
trained_model_instances = [model['model'] for model in models_sorted]
# Extract prior probabilities for trained models
prior_probabilities = np.array([
prior_probabilities_all[type(model_instance)]
for model_instance in trained_model_instances
])
# return prior_probabilities
# Dirichlet samples
alpha = np.ones(len(trained_model_instances))
samples = dirichlet.rvs(alpha, size=num_samples)
# Calculate weights and normalize them
weights = np.exp(-samples @ observed_errors)
normalized_weights = weights / np.sum(weights)
# return np.dot(normalized_weights, samples)
# Update posterior probabilities for trained models
updated_posterior_probabilities_trained = prior_probabilities * np.dot(normalized_weights, samples)
# Create a copy of the prior probabilities for all models
updated_posterior_probabilities_all = deepcopy(prior_probabilities_all)
# Update probabilities for trained models
for i, model_instance in enumerate(trained_model_instances):
updated_posterior_probabilities_all[type(model_instance)] = updated_posterior_probabilities_trained[i]
# Apply penalty factor to untrained modelsprior_probabilities
untrained_model_instances = [
model_instance
for model_instance in prior_probabilities_all.keys()
if not any(isinstance(model_instance, type(trained_instance)) for trained_instance in trained_model_instances)
]
for model_instance in untrained_model_instances:
updated_posterior_probabilities_all[model_instance] *= penalty_factor
# Normalize all probabilities
total_probability = sum(updated_posterior_probabilities_all.values())
return {k: v / total_probability for k, v in updated_posterior_probabilities_all.items()}
class MSBoostRegressor(BaseEstimator, RegressorMixin):
"""A Gradient Boosting Regressor
"""
def __init__(self):
""" Initialize VGBRegressor Object
"""
def _metrics(self, vt, vp, model, time=None):
"""get loss metrics of a model
Args:
vt (iterable): validation true values
vp (iterable): validation pred values
model (object): any model with fit and predict method
time (float, optional): execution time of the model. Defaults to None.
Returns:
dict['model', 'time', 'loss']
"""
if self.custom_loss_metrics:
return {'model': model, 'time': time, 'loss': self.custom_loss_metrics(vt, vp)}
return {"model": model, "time": time, "loss": mean_squared_error(vt, vp)}
def _create_model(self, X, y, model_name, time_it: bool = False):
"""fit a model instance
Args:
X (iterable)
y (iterable)
model_name (object): any model object with fit and predict methods
time_it (bool, optional): measure execution time. Defaults to False.
Returns:
tuple(model, time=None)
"""
model = model_name()
if time_it:
begin = perf_counter()
model.fit(X, y)
end = perf_counter()
return (model, end - begin)
return (model.fit(X, y), None)
def _get_metrics(self, model_name):
"""a helper fuction, combines self._create_model and self._metrics
Args:
model_name (object): any model with fit and predict methods
Returns:
self._metrics
"""
try:
Xt, Xv, yt, yv = train_test_split(self._X, self._y)
results = self._create_model(Xt, yt, model_name, time_it=False)
model, time = results[0], results[1]
return self._metrics(yv,
model.predict(Xv), model, time)
except Exception:
return None
def _get_results(self, X, y) -> list:
"""Use multi-threading to return all results
Args:
X (iterable)
y (iterable)
Returns:
list[dict['model', 'time', 'loss']]
"""
results = []
# self._X = self._minimax.fit_transform(self._robust.fit_transform(
# KNNImputer(weights='distance').fit_transform(X)))
self._X = X
self._y = y
with ThreadPoolExecutor(max_workers=len(self._models)) as executor:
res = executor.map(self._get_metrics, self._models)
results = [i for i in res if i]
return results
def fit(
self, X, y,
early_stopping: bool = False,
early_stopping_min_delta: float = 0.001,
early_stopping_patience: int = 10,
custom_models: list = None,
learning_rate: float = 0.01,
n_estimators: int = 100,
warm_start: bool = False,
complexity: bool = True,
light: bool = False,
custom_loss_metrics: object = False,
freeze_models: bool = False,
bayes: bool = False,
n_models: int = 5,
n_iter_models: int = 5,
n_warm: int = None,
n_random_models: int = 12,
bayes_penalty_factor: float = 0.5,
bayes_random_factor: float = 0.2,
return_vals: bool = True,
# stacking_model=ExtraTreesRegressor,
return_best = True,
):
"""fit VGBoost model
Args:
X (iterable)
y (iterbale)
early_stopping (bool, optional): Defaults to False.
early_stopping_min_delta (float, optional): Defaults to 0.001.
early_stopping_patience (int, optional): Defaults to 10.
custom_models (tuple, optional): tuple of custom models with fit and predict methods. Defaults to None.
learning_rate (float, optional): Defaults to 0.05.
n_estimators (int, optional): Defaults to 100.
warm_start (bool, optional): Defaults to False.
complexity (bool, optional): trains more models but has greater time complexity. Defaults to False.
light (bool, optional): trains less models. Defaults to True.
custom_loss_metrics (object, optional): _description_. Defaults to False.
freeze_models (bool, optional): test only a selected models. Defaults to False.
n_models (int, optional): Applicable for freeze_models, number of models to train. Defaults to 5.
n_iter_models (int, optional): Applicable for freeze_models, number of iterations before finalizing the models. Defaults to 5.
n_warm (int, optional): Applicable for warm start, number of iterarions to store. Defaults to None.
n_random_models (int, optional): train on a random number of models. Defaults to 0.
return_vals (bool, optional): returns analytics. Defaults to True.
Returns:
tuple[final ensemble sequence, mean absolute error of each layer, residual value of each layer],
None
"""
X, y = check_X_y(X, y)
self.classes_ = np.array(set(y))
# self.stacking_model = stacking_model
self.y_max = max(y)
# self.n_classes_ = len(self.classes_)
self.len_X = X.shape[0]
self.n_features_in_ = X.shape[1]
if custom_models:
self._models = custom_models
self.custom_loss_metrics = custom_loss_metrics
self.learning_rate = learning_rate
# self.final_estimator = final_estimator
self.n_estimators = n_estimators
self.early_stopping = early_stopping
self.early_stopping_min_delta = early_stopping_min_delta
self.early_stopping_patience = early_stopping_patience
if custom_models:
self._models_lst = custom_models
else:
if complexity:
self._models_lst = {DecisionTreeRegressor, LinearRegression, BayesianRidge, KNeighborsRegressor, HistGradientBoostingRegressor, LGBMRegressor, GradientBoostingRegressor, XGBRegressor,
ElasticNetCV, LassoLarsCV, LassoCV, ExtraTreesRegressor,
BaggingRegressor, NuSVR, SGDRegressor, KernelRidge, MLPRegressor,
RidgeCV, ARDRegression, RANSACRegressor, HuberRegressor, TheilSenRegressor, LassoLarsIC}
elif light:
self._models_lst = {LGBMRegressor, ExtraTreesRegressor,
BaggingRegressor, RANSACRegressor, LassoLarsIC, BayesianRidge}
else:
self._models_lst = {DecisionTreeRegressor, LinearRegression, BayesianRidge, KNeighborsRegressor, LGBMRegressor,
ElasticNet, LassoLars, Lasso, SGDRegressor, BaggingRegressor, ExtraTreesRegressor,
Ridge, ARDRegression, RANSACRegressor, LassoLarsIC}
self._models = deepcopy(self._models_lst)
self.freeze_models = freeze_models
if self.freeze_models:
self.n_models = n_models
self.n_iter_models = n_iter_models
self._y_mean = 0
# base model: mean
# computer residuals: y - y hat
# for n_estimators: a) y = prev residuals && residuals * learning rate
# add early stopping
# restore best weights
# ada boost and adaptive scaling for learning rates
self._ensemble = []
preds = DataFrame(
data={'yt': y, 'p0': np.full((len(y)), self._y_mean)})
residuals = DataFrame(
data={'r0': y - self._y_mean})
errors = []
if bayes:
self.prior_proba = dict(zip(self._models_lst, [1/len(self._models_lst)]*len(self._models_lst)))
if not early_stopping:
if warm_start:
# for i in range(1, self.n_estimators + 1):
# try:
# y = residuals[f'r{i - 1}']
# except KeyError:
# return residuals
# results = self._get_results(X, y)
# min_loss = min(results, key=lambda x: x.get(
# "loss", float('inf')))["loss"] # https://stackoverflow.com/a/19619294
# min_model = [i['model']
# for i in results if min_loss >= i['loss']][0]
# preds[f'p{i}'] = residuals.sum(axis=1) + min_model.predict(
# X) * self.learning_rate
# residuals[f'r{i}'] = preds['yt'] - preds[f'p{i}']
# if i % n_warm == 0:
# X[f"r{i}"] = residuals[f'r{i}'].copy()
# try:
# errors.append(mean_squared_error(
# preds['yt'], preds[f'p{i}']))
# except Exception:
# df = concat(
# [preds['yt'], preds[f'p{i - 1}']], axis=1).dropna()
# errors.append(mean_squared_error(
# df['yt'], df[f"p{i - 1}"]))
# self._ensemble.append(min_model)
pass
else:
for i in range(1, self.n_estimators + 1):
try:
y = residuals[f'r{i - 1}']
except KeyError:
return residuals, i, self._ensemble
results = self._get_results(X, y)
if n_random_models > 0:
self._models = tuple(
sample(self._models_lst, n_random_models))
elif self.freeze_models:
if self.n_iter_models > -1:
freeze_models_lst.append([i.get("model") for i in sorted(results, key=lambda x: x.get(
"loss", float('inf')))][:n_models])
self.n_iter_models -= 1
else:
model_lst = sorted(dict(Counter(i for sub in freeze_models_lst for i in set(
sub))).items(), key=lambda ele: ele[1], reverse=True)
# return model_lst
self._models = tuple(type(i[0]) for i in model_lst)[
:n_models]
# return self._models
elif bayes:
self.prior_proba = update_posterior_probabilities(models=results, prior_probabilities_all=self.prior_proba, penalty_factor=bayes_penalty_factor)
sorted_models = sorted(self.prior_proba.items(), key=lambda x: x[1], reverse=True)
top_n = int(n_models * (1-bayes_random_factor))
if n_iter_models > -1:
n_iter_models -= 1
else:
self._models = [model for model, _ in sorted_models[:top_n]] + sample([model for model, _ in sorted_models[top_n+1:]], int(n_models * bayes_random_factor))
# return models
try:
min_loss = min(results, key=lambda x: x.get(
"loss", float('inf')))["loss"] # https://stackoverflow.com/a/19619294
except Exception:
continue
min_model = [i['model']
for i in results if min_loss >= i['loss']][0]
preds[f'p{i}'] = residuals.sum(axis=1) + min_model.predict(
X) * self.learning_rate
residuals[f'r{i}'] = preds['yt'] - preds[f'p{i}']
errors.append(mean_squared_error(
preds['yt'], preds[f'p{i}']))
self._ensemble.append(min_model)
# return results
if errors[i - 1] == 0 and return_best==True:
break
else:
return self
min_error = min(errors)
min_error_i = [i for i in range(
len(errors)) if errors[i] == min_error][0]
if return_best:
self._ensemble, errors = self._ensemble[:
min_error_i], errors[:min_error_i]
else:
self._ensemble, errors = self._ensemble[:], errors[:]
residuals = residuals[:len(errors)]
# preds = preds[preds.columns[:min_error_i + 2]]
if return_vals:
self.residuls = residuals
self.errors = errors
self.ensemble = self._ensemble
# X, y = preds.drop("yt", axis=1), preds["yt"]
# self.preds = X
# self.final_estimator.fit(X, y)
def predict(self, X_test):
"""
Args:
X_test (iterable)
Returns:
numpy.array: predictions
"""
# check_is_fitted(self)
X_test = check_array(X_test)
# X_test = self._robust.transform(self._minimax.transform(deepcopy(X_test)))
preds = DataFrame(
data={'p0': np.full((len(X_test)), 0)})
for i in range(len(self._ensemble)):
preds[f"p{i + 1}"] = self._ensemble[i].predict(X_test)
preds_ = preds.sum(axis=1)
self.preds = preds
return preds_
class MSBoostClassifier(BaseEstimator, ClassifierMixin):
"""A Gradient Boosting Classifier
"""
def __init__(self, **kwargs):
""" Initialize MSBoost Object
"""
def _metrics(self, vt, vp, model, time=None):
"""get loss metrics of a model
Args:
vt (iterable): validation true values
vp (iterable): validation pred values
model (object): any model with fit and predict method
time (float, optional): execution time of the model. Defaults to None.
Returns:
dict['model', 'time', 'loss']
"""
if self.custom_loss_metrics:
return {'model': model, 'time': time, 'loss': self.custom_loss_metrics(vt, vp)}
return {"model": model, "time": time, "loss": mean_squared_error(vt, vp)}
def _create_model(self, X, y, model_name, time_it: bool = False):
"""fit a model instance
Args:
X (iterable)
y (iterable)
model_name (object): any model object with fit and predict methods
time_it (bool, optional): measure execution time. Defaults to False.
Returns:
tuple(model, time=None)
"""
model = model_name()
if time_it:
begin = perf_counter()
model.fit(X, y)
end = perf_counter()
return (model, end - begin)
return (model.fit(X, y), None)
def _get_metrics(self, model_name):
"""a helper fuction, combines self._create_model and self._metrics
Args:
model_name (object): any model with fit and predict methods
Returns:
self._metrics
"""
try:
Xt, Xv, yt, yv = train_test_split(self._X, self._y)
results = self._create_model(Xt, yt, model_name, time_it=False)
model, time = results[0], results[1]
return self._metrics(yv,
model.predict(Xv), model, time)
except Exception:
return None
def _get_results(self, X, y) -> list:
"""Use multi-threading to return all results
Args:
X (iterable)
y (iterable)
Returns:
list[dict['model', 'time', 'loss']]
"""
results = []
# self._X = self._minimax.fit_transform(self._robust.fit_transform(
# KNNImputer(weights='distance').fit_transform(X)))
self._X = X
self._y = y
with ThreadPoolExecutor(max_workers=len(self._models)) as executor:
res = executor.map(self._get_metrics, self._models)
results = [i for i in res if i]
return results
def fit(
self, X, y,
early_stopping: bool = False,
early_stopping_min_delta: float = 0.001,
early_stopping_patience: int = 10,
custom_models: list = None,
learning_rate: float = 0.01,
n_estimators: int = 100,
warm_start: bool = False,
complexity: bool = True,
light: bool = False,
custom_loss_metrics: object = False,
freeze_models: bool = False,
bayes: bool = False,
n_models: int = 5,
n_iter_models: int = 5,
n_warm: int = None,
n_random_models: int = 12,
bayes_penalty_factor: float = 0.5,
bayes_random_factor: float = 0.2,
return_vals: bool = True,
# stacking_model=ExtraTreesRegressor,
return_best = True,
):
"""fit VGBoost model
Args:
X (iterable)
y (iterbale)
early_stopping (bool, optional): Defaults to False.
early_stopping_min_delta (float, optional): Defaults to 0.001.
early_stopping_patience (int, optional): Defaults to 10.
custom_models (tuple, optional): tuple of custom models with fit and predict methods. Defaults to None.
learning_rate (float, optional): Defaults to 0.05.
n_estimators (int, optional): Defaults to 100.
warm_start (bool, optional): Defaults to False.
complexity (bool, optional): trains more models but has greater time complexity. Defaults to False.
light (bool, optional): trains less models. Defaults to True.
custom_loss_metrics (object, optional): _description_. Defaults to False.
freeze_models (bool, optional): test only a selected models. Defaults to False.
n_models (int, optional): Applicable for freeze_models, number of models to train. Defaults to 5.
n_iter_models (int, optional): Applicable for freeze_models, number of iterations before finalizing the models. Defaults to 5.
n_warm (int, optional): Applicable for warm start, number of iterarions to store. Defaults to None.
n_random_models (int, optional): train on a random number of models. Defaults to 0.
return_vals (bool, optional): returns analytics. Defaults to True.
Returns:
tuple[final ensemble sequence, mean absolute error of each layer, residual value of each layer],
None
"""
X, y = check_X_y(X, y)
self.classes_ = np.array(set(y))
# self.stacking_model = stacking_model
self.y_max = max(y)
# self.n_classes_ = len(self.classes_)
self.len_X = X.shape[0]
self.n_features_in_ = X.shape[1]
if custom_models:
self._models = custom_models
self.custom_loss_metrics = custom_loss_metrics
self.learning_rate = learning_rate
# self.final_estimator = final_estimator
self.n_estimators = n_estimators
self.early_stopping = early_stopping
self.early_stopping_min_delta = early_stopping_min_delta
self.early_stopping_patience = early_stopping_patience
if custom_models:
self._models_lst = custom_models
else:
if complexity:
self._models_lst = {DecisionTreeRegressor, LinearRegression, BayesianRidge, KNeighborsRegressor, HistGradientBoostingRegressor, LGBMRegressor, GradientBoostingRegressor, XGBRegressor,
ElasticNetCV, LassoLarsCV, LassoCV, ExtraTreesRegressor,
BaggingRegressor, NuSVR, SGDRegressor, KernelRidge, MLPRegressor,
RidgeCV, ARDRegression, RANSACRegressor, HuberRegressor, TheilSenRegressor, LassoLarsIC}
elif light:
self._models_lst = {LGBMRegressor, ExtraTreesRegressor,
BaggingRegressor, RANSACRegressor, LassoLarsIC, BayesianRidge}
else:
self._models_lst = {DecisionTreeRegressor, LinearRegression, BayesianRidge, KNeighborsRegressor, LGBMRegressor,
ElasticNet, LassoLars, Lasso, SGDRegressor, BaggingRegressor, ExtraTreesRegressor,
Ridge, ARDRegression, RANSACRegressor, LassoLarsIC}
self._models = deepcopy(self._models_lst)
self.freeze_models = freeze_models
if self.freeze_models:
self.n_models = n_models
self.n_iter_models = n_iter_models
self._y_mean = 0
# base model: mean
# computer residuals: y - y hat
# for n_estimators: a) y = prev residuals && residuals * learning rate
# add early stopping
# restore best weights
# ada boost and adaptive scaling for learning rates
self._ensemble = []
preds = DataFrame(
data={'yt': y, 'p0': np.full((len(y)), self._y_mean)})
residuals = DataFrame(
data={'r0': y - self._y_mean})
errors = []
if bayes:
self.prior_proba = dict(zip(self._models_lst, [1/len(self._models_lst)]*len(self._models_lst)))
if not early_stopping:
if warm_start:
# for i in range(1, self.n_estimators + 1):
# try:
# y = residuals[f'r{i - 1}']
# except KeyError:
# return residuals
# results = self._get_results(X, y)
# min_loss = min(results, key=lambda x: x.get(
# "loss", float('inf')))["loss"] # https://stackoverflow.com/a/19619294
# min_model = [i['model']
# for i in results if min_loss >= i['loss']][0]
# preds[f'p{i}'] = residuals.sum(axis=1) + min_model.predict(
# X) * self.learning_rate
# residuals[f'r{i}'] = preds['yt'] - preds[f'p{i}']
# if i % n_warm == 0:
# X[f"r{i}"] = residuals[f'r{i}'].copy()
# try:
# errors.append(mean_squared_error(
# preds['yt'], preds[f'p{i}']))
# except Exception:
# df = concat(
# [preds['yt'], preds[f'p{i - 1}']], axis=1).dropna()
# errors.append(mean_squared_error(
# df['yt'], df[f"p{i - 1}"]))
# self._ensemble.append(min_model)
pass
else:
for i in range(1, self.n_estimators + 1):
try:
y = residuals[f'r{i - 1}']
except KeyError:
return residuals, i, self._ensemble
results = self._get_results(X, y)
if n_random_models > 0:
self._models = tuple(
sample(self._models_lst, n_random_models))
elif self.freeze_models:
if self.n_iter_models > -1:
freeze_models_lst.append([i.get("model") for i in sorted(results, key=lambda x: x.get(
"loss", float('inf')))][:n_models])
self.n_iter_models -= 1
else:
model_lst = sorted(dict(Counter(i for sub in freeze_models_lst for i in set(
sub))).items(), key=lambda ele: ele[1], reverse=True)
# return model_lst
self._models = tuple(type(i[0]) for i in model_lst)[
:n_models]
# return self._models
elif bayes:
self.prior_proba = update_posterior_probabilities(models=results, prior_probabilities_all=self.prior_proba, penalty_factor=bayes_penalty_factor)
sorted_models = sorted(self.prior_proba.items(), key=lambda x: x[1], reverse=True)
top_n = int(n_models * (1-bayes_random_factor))
if n_iter_models > -1:
n_iter_models -= 1
else:
self._models = [model for model, _ in sorted_models[:top_n]] + sample([model for model, _ in sorted_models[top_n+1:]], int(n_models * bayes_random_factor))
# return models
try:
min_loss = min(results, key=lambda x: x.get(
"loss", float('inf')))["loss"] # https://stackoverflow.com/a/19619294
except Exception:
continue
min_model = [i['model']
for i in results if min_loss >= i['loss']][0]
preds[f'p{i}'] = residuals.sum(axis=1) + min_model.predict(
X) * self.learning_rate
residuals[f'r{i}'] = preds['yt'] - preds[f'p{i}']
errors.append(mean_squared_error(
preds['yt'], preds[f'p{i}']))
self._ensemble.append(min_model)
# return results
if errors[i - 1] == 0 and return_best==True:
break
else:
return self
min_error = min(errors)
min_error_i = [i for i in range(
len(errors)) if errors[i] == min_error][0]
if return_best:
self._ensemble, errors = self._ensemble[:
min_error_i], errors[:min_error_i]
else:
self._ensemble, errors = self._ensemble[:], errors[:]
residuals = residuals[:len(errors)]
# preds = preds[preds.columns[:min_error_i + 2]]
if return_vals:
self.residuls = residuals
self.errors = errors
self.ensemble = self._ensemble
# X, y = preds.drop("yt", axis=1), preds["yt"]
# self.preds = X
# self.final_estimator.fit(X, y)
def predict(self, X_test):
"""
Args:
X_test (iterable)
Returns:
numpy.array: predictions
"""
check_is_fitted(self)
X_test = check_array(X_test)
# X_test = self._robust.transform(self._minimax.transform(deepcopy(X_test)))
return np.argmax(self.predict_proba(X_test), axis=1)
def predict_proba(self, X):
# # crude data
# # dont quantize
# # https://datascience.stackexchange.com/q/22762
# # https://www.youtube.com/watch?v=ZsM2z0pTbnk
# # https://www.youtube.com/watch?v=yJK4sYclhg8
check_is_fitted(self)
X = check_array(X)
preds = DataFrame(
data={'p0': np.full((len(X)), self._y_mean)})
for i in range(len(self._ensemble)):
preds[f"p{i}"] = self._ensemble[i].predict(X)
preds_ = MinMaxScaler().fit_transform(
preds.sum(axis=1).to_numpy().reshape(-1, 1))
preds_ = preds_.reshape(1, -1)[0]
proba = []
for i in preds_:
proba.append([1.0 - i, i])
return np.array(proba)
def subsample(X, y, num_samples=1000, random_state=7):
"""
Subsample the arrays X and y.
Parameters:
- X: Input array
- y: Target array
- num_samples: Number of samples to retain
- random_state: Seed for random number generator (default is None)
Returns:
- Subsampled X and y arrays
"""
if random_state is not None:
np.random.seed(random_state)
indices = np.random.choice(len(y), num_samples, replace=False)
return X[indices], y[indices]
def reg_cv_mse(model, X, y):
reg = model()
n_folds = 5
kf = KFold(n_splits=n_folds, shuffle=True, random_state=7)
cv_results = cross_val_score(reg, X, y, cv=kf, scoring='neg_mean_squared_error')
cv_results = -cv_results
mean_mse = np.mean(cv_results)
std_mse = np.std(cv_results)
return f"{mean_mse:.4f} ± {std_mse:.4f}"
def get_card_split(df, cols, n=11):
"""
Splits categorical columns into 2 lists based on cardinality (i.e # of unique values)
Parameters (Source: https://github.com/shankarpandala/lazypredict/blob/dev/lazypredict/Supervised.py#L114)
----------
df : Pandas DataFrame
DataFrame from which the cardinality of the columns is calculated.
cols : list-like
Categorical columns to list
n : int, optional (default=11)
The value of 'n' will be used to split columns.
Returns
-------
card_low : list-like
Columns with cardinality < n
card_high : list-like
Columns with cardinality >= n
"""
cond = df[cols].nunique() > n
card_high = cols[cond]
card_low = cols[~cond]
return card_low, card_high
def append_row(df, data):
"""
Append a row of data to a DataFrame.
Parameters :
- df (pandas.DataFrame): The DataFrame to which the row will be appended.
- data (list): The data representing a row to be appended. Should be a list where each element corresponds to a column in the DataFrame.
Returns:
None
"""
df.loc[len(df)] = data