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allow user to supply vector of tau, one value per colony #55

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Aariq opened this issue Feb 1, 2021 · 2 comments
Open

allow user to supply vector of tau, one value per colony #55

Aariq opened this issue Feb 1, 2021 · 2 comments
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enhancement New feature or request question Further information is requested

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@Aariq
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Aariq commented Feb 1, 2021

I need to look more into the current behavior and think about desired behavior, but here's the general idea...

You may want to use a different set of covariates when estimating the switchpoint, tau, than when you estimate colony growth, given a switchpoint. The only way to really do that currently is to run bumbl() once, then extract the values of tau, then sort of manually fit the switchpoint model by calculating the .post covariate. If you could override the grid-search portion of bumbl by providing known taus, you could solve this issue by running bumbl() once to estimate tau for each colony, then run it again with bumbl(...tau = tau) and a different set of co-variates.

I think this would do what Elizabeth and Sylvie were hoping it would do.

@Aariq Aariq added enhancement New feature or request question Further information is requested labels Feb 1, 2021
@Aariq Aariq added this to the v0.2.0 milestone Feb 1, 2021
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Aariq commented Feb 17, 2021

I no longer think this behavior is desirable.

@Aariq Aariq closed this as completed Feb 17, 2021
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Aariq commented Apr 14, 2021

Actually, this seems like it could be a useful option still.

@Aariq Aariq reopened this Apr 14, 2021
@Aariq Aariq removed this from the v0.2.0 milestone Apr 14, 2021
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