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Question on which specific database contains energy and forces #41

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JSLJ23 opened this issue Jul 23, 2024 · 2 comments
Open

Question on which specific database contains energy and forces #41

JSLJ23 opened this issue Jul 23, 2024 · 2 comments

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@JSLJ23
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JSLJ23 commented Jul 23, 2024

In this work, we aim to aid the training of Hamiltonian-predicting models and NNPs for druglike
molecules by significantly extending and improving the nablaDFT dataset [11]. We double the number
of molecules and conformations to 1,936,929 and 12,676,264, respectively.

May I know while database file contains these 12,676,264 conformations with energy and forces?

@KuzmaKhrabrov
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Hello! At this point forces are available for all data splits apart from dataset_train_full and dataset_test_conformations_full and stored in ase_db files.
All the databases are here: nablaDFT/links/energy_databases.json or available through the lightning pipeline.
The databases contain formation energy as well.

Alternately, separate conformations are available as an archive of xyz files here : archive and energies with other DFT properties are stored in csv file: csv file

@JSLJ23
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JSLJ23 commented Jul 24, 2024

Do the conformers_archive_v2.tar contain the energy and forces?

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